RNA–Protein interactions for RNA: ENST00000440239.5

CHTF18-204, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 1 (best)

Gene CHTF18, Length 1,801 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-204ENST00000440239 MAP2P11137 1827 aaKnown RBP31.35■■■□□ 2.61
CHTF18-204ENST00000440239 RGPD5Q99666 1765 aa31.35■■■□□ 2.61
CHTF18-204ENST00000440239 EMILIN1Q9Y6C2 1016 aa31.35■■■□□ 2.61
CHTF18-204ENST00000440239 CAMTA1Q9Y6Y1 1673 aa31.35■■■□□ 2.61
CHTF18-204ENST00000440239 NPC1L1Q9UHC9 1359 aa31.35■■■□□ 2.61
CHTF18-204ENST00000440239 LMO7Q8WWI1 1683 aa31.34■■■□□ 2.61
CHTF18-204ENST00000440239 CCDC9Q9Y3X0 531 aaKnown RBP31.34■■■□□ 2.61
CHTF18-204ENST00000440239 COL18A1P39060 1754 aa31.33■■■□□ 2.61
CHTF18-204ENST00000440239 QTRT2Q9H974 415 aaKnown RBP31.33■■■□□ 2.61
CHTF18-204ENST00000440239 NRAPQ86VF7 1730 aa31.31■■■□□ 2.6
CHTF18-204ENST00000440239 HOXC9P31274 260 aa31.3■■■□□ 2.6
CHTF18-204ENST00000440239 IP6K1Q92551 441 aa31.3■■■□□ 2.6
CHTF18-204ENST00000440239 LTV1Q96GA3 475 aaPredicted RBP31.3■■■□□ 2.6
CHTF18-204ENST00000440239 POLKQ9UBT6 870 aa31.3■■■□□ 2.6
CHTF18-204ENST00000440239 TRPC5Q9UL62 973 aaPredicted RBP31.3■■■□□ 2.6
CHTF18-204ENST00000440239 CSB-PGBD3P0DP91 1061 aa31.29■■■□□ 2.6
CHTF18-204ENST00000440239 POTEAQ6S8J7 498 aa31.28■■■□□ 2.6
CHTF18-204ENST00000440239 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.28■■■□□ 2.6
CHTF18-204ENST00000440239 COL5A2P05997 1499 aaPredicted RBP31.28■■■□□ 2.6
CHTF18-204ENST00000440239 PEAK1Q9H792 1746 aa31.27■■■□□ 2.6
CHTF18-204ENST00000440239 LARP1Q6PKG0 1096 aaKnown RBP31.26■■■□□ 2.6
CHTF18-204ENST00000440239 USP35Q9P2H5 1018 aa31.26■■■□□ 2.59
CHTF18-204ENST00000440239 RTL1A6NKG5 1358 aa31.25■■■□□ 2.59
CHTF18-204ENST00000440239 FLT4P35916 1363 aa31.25■■■□□ 2.59
CHTF18-204ENST00000440239 HSP90AB2PQ58FF8 381 aa31.25■■■□□ 2.59
CHTF18-204ENST00000440239 ABCC6O95255 1503 aa31.25■■■□□ 2.59
CHTF18-204ENST00000440239 ANKRD24Q8TF21 1146 aa31.24■■■□□ 2.59
CHTF18-204ENST00000440239 ATRNO75882 1429 aa31.24■■■□□ 2.59
CHTF18-204ENST00000440239 VPS72Q15906 364 aa31.24■■■□□ 2.59
CHTF18-204ENST00000440239 BLMP54132 1417 aaPredicted RBP31.23■■■□□ 2.59
CHTF18-204ENST00000440239 TOM1L2Q6ZVM7 507 aa31.23■■■□□ 2.59
CHTF18-204ENST00000440239 ERBB3P21860 1342 aa31.21■■■□□ 2.59
CHTF18-204ENST00000440239 MTHFSP49914 203 aa31.2■■■□□ 2.59
CHTF18-204ENST00000440239 GJD4Q96KN9 370 aaPredicted RBP31.2■■■□□ 2.59
CHTF18-204ENST00000440239 WDR17Q8IZU2 1322 aa31.2■■■□□ 2.59
CHTF18-204ENST00000440239 KIF24Q5T7B8 1368 aa31.2■■■□□ 2.58
CHTF18-204ENST00000440239 RXRBP28702 533 aa31.19■■■□□ 2.58
CHTF18-204ENST00000440239 NLRP2Q9NX02 1062 aa31.19■■■□□ 2.58
CHTF18-204ENST00000440239 INSRP06213 1382 aa31.17■■■□□ 2.58
CHTF18-204ENST00000440239 RBM6P78332 1123 aaKnown RBP31.17■■■□□ 2.58
CHTF18-204ENST00000440239 SMG6Q86US8 1419 aaKnown RBP31.17■■■□□ 2.58
CHTF18-204ENST00000440239 PARD3Q8TEW0 1356 aa31.17■■■□□ 2.58
CHTF18-204ENST00000440239 SPATA31A5Q5VU36 1347 aa31.17■■■□□ 2.58
CHTF18-204ENST00000440239 SPATA31A7Q8IWB4 1347 aa31.17■■■□□ 2.58
CHTF18-204ENST00000440239 CRB1P82279 1406 aa31.16■■■□□ 2.58
CHTF18-204ENST00000440239 PPP2R1AP30153 589 aa31.16■■■□□ 2.58
CHTF18-204ENST00000440239 SPATA31A1Q5TZJ5 1347 aa31.15■■■□□ 2.58
CHTF18-204ENST00000440239 RALBP1Q15311 655 aa31.14■■■□□ 2.58
CHTF18-204ENST00000440239 GLI3P10071 1580 aa31.13■■■□□ 2.57
CHTF18-204ENST00000440239 A0A0G2JS52 829 aa31.13■■■□□ 2.57
CHTF18-204ENST00000440239 MYT1Q01538 1121 aa31.13■■■□□ 2.57
CHTF18-204ENST00000440239 CDK12Q9NYV4 1490 aaPredicted RBP31.13■■■□□ 2.57
CHTF18-204ENST00000440239 FAM98CQ17RN3 349 aaKnown RBP31.12■■■□□ 2.57
CHTF18-204ENST00000440239 RGPD2P0DJD1 1756 aa31.11■■■□□ 2.57
CHTF18-204ENST00000440239 TCP11L2Q8N4U5 519 aa31.1■■■□□ 2.57
CHTF18-204ENST00000440239 EIF4A2Q14240 407 aaKnown RBP31.09■■■□□ 2.57
CHTF18-204ENST00000440239 CARD10Q9BWT7 1032 aa31.09■■■□□ 2.57
CHTF18-204ENST00000440239 PRKRIP1Q9H875 184 aaPredicted RBP31.09■■■□□ 2.57
CHTF18-204ENST00000440239 USHBP1Q8N6Y0 703 aa31.08■■■□□ 2.57
CHTF18-204ENST00000440239 FAM208AQ9UK61 1670 aaKnown RBP31.08■■■□□ 2.57
CHTF18-204ENST00000440239 NBPF6Q5VWK0 638 aa31.06■■■□□ 2.56
CHTF18-204ENST00000440239 NBPF4Q96M43 638 aa31.06■■■□□ 2.56
CHTF18-204ENST00000440239 ANP32CO43423 234 aa31.05■■■□□ 2.56
CHTF18-204ENST00000440239 CFAP53Q96M91 514 aa31.05■■■□□ 2.56
CHTF18-204ENST00000440239 THRAP3Q9Y2W1 955 aaKnown RBP31.03■■■□□ 2.56
CHTF18-204ENST00000440239 MYBBP1AQ9BQG0 1328 aaKnown RBP31.03■■■□□ 2.56
CHTF18-204ENST00000440239 DIAPH1O60610 1272 aaKnown RBP31.01■■■□□ 2.56
CHTF18-204ENST00000440239 SEPT12Q8IYM1 358 aa31.01■■■□□ 2.56
CHTF18-204ENST00000440239 EYA1Q99502 592 aa31.01■■■□□ 2.56
CHTF18-204ENST00000440239 RGS12O14924 1447 aa31■■■□□ 2.55
CHTF18-204ENST00000440239 BARGINQ6ZT62 677 aa31■■■□□ 2.55
CHTF18-204ENST00000440239 IL13P35225 146 aa30.98■■■□□ 2.55
CHTF18-204ENST00000440239 U2SURPO15042 1029 aaKnown RBP30.96■■■□□ 2.55
CHTF18-204ENST00000440239 ONECUT3O60422 494 aaPredicted RBP30.96■■■□□ 2.55
CHTF18-204ENST00000440239 IL2RBP14784 551 aa30.96■■■□□ 2.55
CHTF18-204ENST00000440239 ILDR2Q71H61 639 aa30.96■■■□□ 2.55
CHTF18-204ENST00000440239 COL3A1P02461 1466 aaPredicted RBP30.96■■■□□ 2.55
CHTF18-204ENST00000440239 WNK3Q9BYP7 1800 aa30.95■■■□□ 2.55
CHTF18-204ENST00000440239 THSD7AQ9UPZ6 1657 aa30.93■■■□□ 2.54
CHTF18-204ENST00000440239 RAPGEF4Q8WZA2 1011 aa30.93■■■□□ 2.54
CHTF18-204ENST00000440239 IGSF1Q8N6C5 1336 aa30.92■■■□□ 2.54
CHTF18-204ENST00000440239 DIEXFQ68CQ4 756 aaKnown RBP30.91■■■□□ 2.54
CHTF18-204ENST00000440239 BRWD3Q6RI45 1802 aa30.91■■■□□ 2.54
CHTF18-204ENST00000440239 SULT6B1Q6IMI4 303 aa30.91■■■□□ 2.54
CHTF18-204ENST00000440239 CDCA7Q9BWT1 371 aaPredicted RBP30.91■■■□□ 2.54
CHTF18-204ENST00000440239 HMOX1P09601 288 aa30.9■■■□□ 2.54
CHTF18-204ENST00000440239 DDB1Q16531 1140 aa30.9■■■□□ 2.54
CHTF18-204ENST00000440239 AEBP1Q8IUX7 1158 aa30.9■■■□□ 2.54
CHTF18-204ENST00000440239 NUDCQ9Y266 331 aa30.9■■■□□ 2.54
CHTF18-204ENST00000440239 DISP2A7MBM2 1401 aa30.89■■■□□ 2.54
CHTF18-204ENST00000440239 TATP17735 454 aaPredicted RBP30.89■■■□□ 2.53
CHTF18-204ENST00000440239 MEGF6O75095 1541 aa30.88■■■□□ 2.53
CHTF18-204ENST00000440239 PDE3BQ13370 1112 aa30.88■■■□□ 2.53
CHTF18-204ENST00000440239 PARP4Q9UKK3 1724 aaKnown RBP30.88■■■□□ 2.53
CHTF18-204ENST00000440239 RGPD1P0DJD0 1748 aa30.87■■■□□ 2.53
CHTF18-204ENST00000440239 LRRC37A3O60309 1634 aa30.87■■■□□ 2.53
CHTF18-204ENST00000440239 EXOC5O00471 708 aa30.87■■■□□ 2.53
CHTF18-204ENST00000440239 KRT27Q7Z3Y8 459 aa30.86■■■□□ 2.53
CHTF18-204ENST00000440239 U2AF1L5P0DN76 240 aaPredicted RBP30.85■■■□□ 2.53
CHTF18-204ENST00000440239 U2AF1Q01081 240 aaKnown RBP eCLIP30.85■■■□□ 2.537e-8■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms