RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 ARHGEF25Q86VW2 580 aa11.46□□□□□ -0.57
LINC00578-201ENST00000439009 KIAA1210Q9ULL0 1709 aa11.46□□□□□ -0.58
LINC00578-201ENST00000439009 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
LINC00578-201ENST00000439009 CARD10Q9BWT7 1032 aa11.45□□□□□ -0.58
LINC00578-201ENST00000439009 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
LINC00578-201ENST00000439009 RGPD3A6NKT7 1758 aaPredicted RBP11.44□□□□□ -0.58
LINC00578-201ENST00000439009 RGPD4Q7Z3J3 1758 aa11.44□□□□□ -0.58
LINC00578-201ENST00000439009 KCNH5Q8NCM2 988 aa11.43□□□□□ -0.58
LINC00578-201ENST00000439009 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
LINC00578-201ENST00000439009 TXNRD1Q16881 649 aa11.42□□□□□ -0.58
LINC00578-201ENST00000439009 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
LINC00578-201ENST00000439009 CPSF1Q10570 1443 aaKnown RBP11.42□□□□□ -0.58
LINC00578-201ENST00000439009 COL18A1P39060 1754 aa11.41□□□□□ -0.58
LINC00578-201ENST00000439009 TTC21BQ7Z4L5 1316 aa11.41□□□□□ -0.58
LINC00578-201ENST00000439009 EXOC5O00471 708 aa11.41□□□□□ -0.58
LINC00578-201ENST00000439009 ZBTB7AO95365 584 aa11.41□□□□□ -0.58
LINC00578-201ENST00000439009 SLC15A2Q16348 729 aa11.41□□□□□ -0.58
LINC00578-201ENST00000439009 LRRC37A3O60309 1634 aa11.41□□□□□ -0.58
LINC00578-201ENST00000439009 EVC2Q86UK5 1308 aa11.4□□□□□ -0.58
LINC00578-201ENST00000439009 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
LINC00578-201ENST00000439009 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
LINC00578-201ENST00000439009 STK32BQ9NY57 414 aa11.4□□□□□ -0.58
LINC00578-201ENST00000439009 CASZ1Q86V15 1759 aa11.4□□□□□ -0.58
LINC00578-201ENST00000439009 CCDC7Q96M83 1385 aa11.4□□□□□ -0.59
LINC00578-201ENST00000439009 ZNF784Q8NCA9 323 aaPredicted RBP11.39□□□□□ -0.59
LINC00578-201ENST00000439009 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
LINC00578-201ENST00000439009 MTFR1LQ9H019 292 aa11.39□□□□□ -0.59
LINC00578-201ENST00000439009 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
LINC00578-201ENST00000439009 FHDC1Q9C0D6 1143 aaPredicted RBP11.38□□□□□ -0.59
LINC00578-201ENST00000439009 SBF2Q86WG5 1849 aa11.37□□□□□ -0.59
LINC00578-201ENST00000439009 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
LINC00578-201ENST00000439009 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
LINC00578-201ENST00000439009 MAP3K5Q99683 1374 aa11.37□□□□□ -0.59
LINC00578-201ENST00000439009 PIK3C2AO00443 1686 aa11.36□□□□□ -0.59
LINC00578-201ENST00000439009 ABCC6O95255 1503 aa11.36□□□□□ -0.59
LINC00578-201ENST00000439009 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
LINC00578-201ENST00000439009 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
LINC00578-201ENST00000439009 NFAT5O94916 1531 aa11.35□□□□□ -0.59
LINC00578-201ENST00000439009 UTRNP46939 3433 aa11.34□□□□□ -0.59
LINC00578-201ENST00000439009 ARXQ96QS3 562 aa11.34□□□□□ -0.59
LINC00578-201ENST00000439009 TRPM1Q7Z4N2 1603 aa11.34□□□□□ -0.59
LINC00578-201ENST00000439009 ERBB3P21860 1342 aa11.34□□□□□ -0.59
LINC00578-201ENST00000439009 KTN1Q86UP2 1357 aaKnown RBP11.33□□□□□ -0.6
LINC00578-201ENST00000439009 MYOM1P52179 1685 aa11.33□□□□□ -0.6
LINC00578-201ENST00000439009 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
LINC00578-201ENST00000439009 SOX12O15370 315 aa11.32□□□□□ -0.6
LINC00578-201ENST00000439009 IL2RBP14784 551 aa11.32□□□□□ -0.6
LINC00578-201ENST00000439009 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
LINC00578-201ENST00000439009 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
LINC00578-201ENST00000439009 LRRC4BQ9NT99 713 aa11.32□□□□□ -0.6
LINC00578-201ENST00000439009 SBNO2Q9Y2G9 1366 aa11.31□□□□□ -0.6
LINC00578-201ENST00000439009 WNK3Q9BYP7 1800 aa11.31□□□□□ -0.6
LINC00578-201ENST00000439009 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
LINC00578-201ENST00000439009 ZNF827Q17R98 1081 aa11.31□□□□□ -0.6
LINC00578-201ENST00000439009 ACSBG1Q96GR2 724 aa11.31□□□□□ -0.6
LINC00578-201ENST00000439009 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
LINC00578-201ENST00000439009 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
LINC00578-201ENST00000439009 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
LINC00578-201ENST00000439009 PAPPAQ13219 1627 aa11.3□□□□□ -0.6
LINC00578-201ENST00000439009 NME9Q86XW9 330 aa11.29□□□□□ -0.6
LINC00578-201ENST00000439009 ANKRD24Q8TF21 1146 aa11.29□□□□□ -0.6
LINC00578-201ENST00000439009 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
LINC00578-201ENST00000439009 CD163L1Q9NR16 1453 aa11.29□□□□□ -0.6
LINC00578-201ENST00000439009 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
LINC00578-201ENST00000439009 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
LINC00578-201ENST00000439009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00578-201ENST00000439009 IP6K1Q92551 441 aa11.27□□□□□ -0.61
LINC00578-201ENST00000439009 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
LINC00578-201ENST00000439009 GPR162Q16538 588 aa11.26□□□□□ -0.61
LINC00578-201ENST00000439009 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
LINC00578-201ENST00000439009 USP54Q70EL1 1684 aa11.26□□□□□ -0.61
LINC00578-201ENST00000439009 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
LINC00578-201ENST00000439009 EDC4Q6P2E9 1401 aaKnown RBP11.26□□□□□ -0.61
LINC00578-201ENST00000439009 SENP3-EIF4A1A0A087X0R7 540 aa11.25□□□□□ -0.61
LINC00578-201ENST00000439009 POLD1P28340 1107 aa11.25□□□□□ -0.61
LINC00578-201ENST00000439009 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
LINC00578-201ENST00000439009 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
LINC00578-201ENST00000439009 TERF2IPQ9NYB0 399 aa11.24□□□□□ -0.61
LINC00578-201ENST00000439009 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
LINC00578-201ENST00000439009 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
LINC00578-201ENST00000439009 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
LINC00578-201ENST00000439009 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
LINC00578-201ENST00000439009 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
LINC00578-201ENST00000439009 NSD2O96028 1365 aa11.22□□□□□ -0.61
LINC00578-201ENST00000439009 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
LINC00578-201ENST00000439009 BTAF1O14981 1849 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 COL24A1Q17RW2 1714 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 A0A1W2PP64 1363 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.61
LINC00578-201ENST00000439009 NEUROD1Q13562 356 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 ZCRB1Q8TBF4 217 aaKnown RBP11.21□□□□□ -0.61
LINC00578-201ENST00000439009 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.61
LINC00578-201ENST00000439009 CHD4Q14839 1912 aa11.21□□□□□ -0.62
LINC00578-201ENST00000439009 MAP3K19Q56UN5 1328 aa11.2□□□□□ -0.62
LINC00578-201ENST00000439009 HOXC9P31274 260 aa11.2□□□□□ -0.62
LINC00578-201ENST00000439009 KCNQ4P56696 695 aa11.2□□□□□ -0.62
LINC00578-201ENST00000439009 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
LINC00578-201ENST00000439009 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms