RNA–Protein interactions for RNA: ENST00000438819.1

CLIP4-206, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 4

Gene CLIP4, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-206ENST00000438819 MTRQ99707 1265 aa8.95□□□□□ -0.98
CLIP4-206ENST00000438819 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
CLIP4-206ENST00000438819 NCOA4Q13772 614 aa8.94□□□□□ -0.98
CLIP4-206ENST00000438819 CCDC24Q8N4L8 307 aa8.94□□□□□ -0.98
CLIP4-206ENST00000438819 PLPP7Q8NBV4 271 aa8.94□□□□□ -0.98
CLIP4-206ENST00000438819 UNC93B1Q9H1C4 597 aa8.94□□□□□ -0.98
CLIP4-206ENST00000438819 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L10C9JJH3 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L21D6R901 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 CRTC2Q53ET0 693 aaPredicted RBP8.93□□□□□ -0.98
CLIP4-206ENST00000438819 B4GALNT3Q6L9W6 998 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
CLIP4-206ENST00000438819 SH3BP5LQ7L8J4 393 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
CLIP4-206ENST00000438819 RASA1P20936 1047 aa8.92□□□□□ -0.98
CLIP4-206ENST00000438819 PTK7Q13308 1070 aa8.92□□□□□ -0.98
CLIP4-206ENST00000438819 MAP7D1Q3KQU3 841 aa8.92□□□□□ -0.98
CLIP4-206ENST00000438819 GNEQ9Y223 722 aaKnown RBP8.92□□□□□ -0.98
CLIP4-206ENST00000438819 TRAF7Q6Q0C0 670 aa8.91□□□□□ -0.98
CLIP4-206ENST00000438819 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
CLIP4-206ENST00000438819 TSGA10IPQ3SY00 556 aa8.9□□□□□ -0.98
CLIP4-206ENST00000438819 DZIP3Q86Y13 1208 aaKnown RBP8.9□□□□□ -0.98
CLIP4-206ENST00000438819 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
CLIP4-206ENST00000438819 CDCA7Q9BWT1 371 aaPredicted RBP8.9□□□□□ -0.98
CLIP4-206ENST00000438819 EML3Q32P44 896 aa8.89□□□□□ -0.99
CLIP4-206ENST00000438819 PHLDB3Q6NSJ2 640 aa8.89□□□□□ -0.99
CLIP4-206ENST00000438819 SND1Q7KZF4 910 aaKnown RBP eCLIP8.89□□□□□ -0.99
CLIP4-206ENST00000438819 SH3RF1Q7Z6J0 888 aa8.89□□□□□ -0.99
CLIP4-206ENST00000438819 ZNF516Q92618 1163 aa8.89□□□□□ -0.99
CLIP4-206ENST00000438819 FAM69CQ0P6D2 419 aa8.88□□□□□ -0.99
CLIP4-206ENST00000438819 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-206ENST00000438819 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
CLIP4-206ENST00000438819 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
CLIP4-206ENST00000438819 FOXD4L4Q8WXT5 416 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-206ENST00000438819 BAP1Q92560 729 aa8.88□□□□□ -0.99
CLIP4-206ENST00000438819 CARD14Q9BXL6 1004 aa8.88□□□□□ -0.99
CLIP4-206ENST00000438819 MAGEB6P1A0A0J9YX57 407 aa8.87□□□□□ -0.99
CLIP4-206ENST00000438819 SSFA2P28290 1259 aa8.87□□□□□ -0.99
CLIP4-206ENST00000438819 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
CLIP4-206ENST00000438819 TXNDC2Q86VQ3 553 aa8.87□□□□□ -0.99
CLIP4-206ENST00000438819 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-206ENST00000438819 SLAIN2Q9P270 581 aa8.87□□□□□ -0.99
CLIP4-206ENST00000438819 NOD1Q9Y239 953 aa8.87□□□□□ -0.99
CLIP4-206ENST00000438819 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-206ENST00000438819 CLDN10P78369 228 aa8.86□□□□□ -0.99
CLIP4-206ENST00000438819 DPYDQ12882 1025 aa8.86□□□□□ -0.99
CLIP4-206ENST00000438819 BPHLQ86WA6 291 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-206ENST00000438819 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
CLIP4-206ENST00000438819 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-206ENST00000438819 CLP1Q92989 425 aaKnown RBP8.86□□□□□ -0.99
CLIP4-206ENST00000438819 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
CLIP4-206ENST00000438819 ERFEQ4G0M1 354 aa8.85□□□□□ -0.99
CLIP4-206ENST00000438819 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
CLIP4-206ENST00000438819 DNAAF2Q9NVR5 837 aaKnown RBP8.85□□□□□ -0.99
CLIP4-206ENST00000438819 DOLKQ9UPQ8 538 aa8.85□□□□□ -0.99
CLIP4-206ENST00000438819 ZBTB7BO15156 539 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-206ENST00000438819 ARID4AP29374 1257 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-206ENST00000438819 AGERQ15109 404 aa8.84□□□□□ -0.99
CLIP4-206ENST00000438819 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
CLIP4-206ENST00000438819 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
CLIP4-206ENST00000438819 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
CLIP4-206ENST00000438819 ZNF511Q8NB15 262 aa8.84□□□□□ -0.99
CLIP4-206ENST00000438819 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
CLIP4-206ENST00000438819 ZNF594Q96JF6 807 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-206ENST00000438819 S1PR4O95977 384 aa8.83□□□□□ -1
CLIP4-206ENST00000438819 RNF20Q5VTR2 975 aa8.83□□□□□ -1
CLIP4-206ENST00000438819 DKK1O94907 266 aa8.82□□□□□ -1
CLIP4-206ENST00000438819 GGCXP38435 758 aa8.82□□□□□ -1
CLIP4-206ENST00000438819 SWI5Q1ZZU3 235 aa8.82□□□□□ -1
CLIP4-206ENST00000438819 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
CLIP4-206ENST00000438819 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
CLIP4-206ENST00000438819 FCF1Q9Y324 198 aaKnown RBP8.82□□□□□ -1
CLIP4-206ENST00000438819 ATP2B4P23634 1241 aa8.81□□□□□ -1
CLIP4-206ENST00000438819 SIX5Q8N196 739 aa8.81□□□□□ -1
CLIP4-206ENST00000438819 ZNF428Q96B54 188 aa8.81□□□□□ -1
CLIP4-206ENST00000438819 SLC10A4Q96EP9 437 aa8.81□□□□□ -1
CLIP4-206ENST00000438819 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.81□□□□□ -1
CLIP4-206ENST00000438819 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
CLIP4-206ENST00000438819 ESPNB1AK53 854 aa8.8□□□□□ -1
CLIP4-206ENST00000438819 GTF2IP78347 998 aa8.8□□□□□ -1
CLIP4-206ENST00000438819 C1QTNF2Q9BXJ5 285 aa8.8□□□□□ -1
CLIP4-206ENST00000438819 RBM25P49756 843 aaKnown RBP8.79□□□□□ -1
CLIP4-206ENST00000438819 PCDHGA11Q9Y5H2 935 aa8.79□□□□□ -1
CLIP4-206ENST00000438819 SEC13P55735 322 aa8.78□□□□□ -1
CLIP4-206ENST00000438819 SH3BP2P78314 561 aa8.78□□□□□ -1
CLIP4-206ENST00000438819 USP4Q13107 963 aa8.78□□□□□ -1
CLIP4-206ENST00000438819 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
CLIP4-206ENST00000438819 CCDC102BQ68D86 513 aa8.78□□□□□ -1
CLIP4-206ENST00000438819 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms