RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
LSM1P1-201ENST00000438629 PALM3A6NDB9 673 aaPredicted RBP7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 SIAH2O43255 324 aa7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 ATP9BO43861 1147 aa7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 ARID5BQ14865 1188 aa7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 MRGPRX2Q96LB1 330 aa7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 KCTD15Q96SI1 283 aaPredicted RBP7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 TFIP11Q9UBB9 837 aaKnown RBP7.26□□□□□ -1.25
LSM1P1-201ENST00000438629 ESPNB1AK53 854 aa7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 GIGYF1O75420 1035 aaPredicted RBP7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 PPP1R15AO75807 674 aaPredicted RBP7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 SKIP12755 728 aa7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 FOXC1Q12948 553 aa7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 NR5A1Q13285 461 aa7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 PHTF2Q8N3S3 785 aa7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 SNIP1Q8TAD8 396 aaKnown RBP7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 SIRT1Q96EB6 747 aa7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 ACIN1Q9UKV3 1341 aaKnown RBP7.25□□□□□ -1.25
LSM1P1-201ENST00000438629 DHX9Q08211 1270 aaKnown RBP7.24□□□□□ -1.25
LSM1P1-201ENST00000438629 UCN2Q96RP3 112 aa7.24□□□□□ -1.25
LSM1P1-201ENST00000438629 CHIC2Q9UKJ5 165 aa7.24□□□□□ -1.25
LSM1P1-201ENST00000438629 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 PLEKHM2Q8IWE5 1019 aa7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 CYP4X1Q8N118 509 aa7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 PLPP7Q8NBV4 271 aa7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 ESF1Q9H501 851 aaKnown RBP7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 PKD2L1Q9P0L9 805 aa7.23□□□□□ -1.25
LSM1P1-201ENST00000438629 TTC24A2A3L6 582 aaPredicted RBP7.22□□□□□ -1.25
LSM1P1-201ENST00000438629 ADH1CP00326 375 aa7.22□□□□□ -1.25
LSM1P1-201ENST00000438629 MAFBQ9Y5Q3 323 aaPredicted RBP7.22□□□□□ -1.25
LSM1P1-201ENST00000438629 WASF2Q9Y6W5 498 aa7.22□□□□□ -1.25
LSM1P1-201ENST00000438629 USP17L5A8MUK1 530 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 GDF9O60383 454 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 ALDH1A1P00352 501 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 GRM5P41594 1212 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 PRR20EP86478 221 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 PRR20CP86479 221 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 PRR20DP86480 221 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 PRR20BP86481 221 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 PRR20AP86496 221 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 USP4Q13107 963 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 EML3Q32P44 896 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 CFAP70Q5T0N1 1121 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 ARXQ96QS3 562 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 VRTNQ9H8Y1 702 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 DOLKQ9UPQ8 538 aa7.21□□□□□ -1.26
LSM1P1-201ENST00000438629 PIK3CDO00329 1044 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 RFX1P22670 979 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 INTS6LQ5JSJ4 861 aaKnown RBP7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 TRIM50Q86XT4 487 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 CCDC116Q8IYX3 515 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 PBXIP1Q96AQ6 731 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 NOD1Q9Y239 953 aa7.2□□□□□ -1.26
LSM1P1-201ENST00000438629 USP17L3A6NCW0 530 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 USP17L4A6NCW7 530 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 ATP5J2-PTCD1G3V325 749 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 MYCP01106 439 aaPredicted RBP7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 FSHRP23945 695 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 PDE4CQ08493 712 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 USP17L2Q6R6M4 530 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 USP17L1Q7RTZ2 530 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 CCDC85AQ96PX6 553 aaPredicted RBP7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 PCDHB11Q9Y5F2 797 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 EMILIN1Q9Y6C2 1016 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 TLL2Q9Y6L7 1015 aa7.19□□□□□ -1.26
LSM1P1-201ENST00000438629 ERVH48-1M5A8F1 160 aa7.18□□□□□ -1.26
LSM1P1-201ENST00000438629 RAB15P59190 212 aa7.18□□□□□ -1.26
LSM1P1-201ENST00000438629 TRAF7Q6Q0C0 670 aa7.18□□□□□ -1.26
LSM1P1-201ENST00000438629 TOR4AQ9NXH8 423 aa7.18□□□□□ -1.26
LSM1P1-201ENST00000438629 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
LSM1P1-201ENST00000438629 MYT1Q01538 1121 aa7.17□□□□□ -1.26
LSM1P1-201ENST00000438629 NCOA4Q13772 614 aa7.17□□□□□ -1.26
LSM1P1-201ENST00000438629 MKRN1Q9UHC7 482 aaKnown RBP7.17□□□□□ -1.26
LSM1P1-201ENST00000438629 TNFRSF10AO00220 468 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 NNTQ13423 1086 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 OXLD1Q5BKU9 147 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 PPP1R26Q5T8A7 1209 aaPredicted RBP7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 LARP1Q6PKG0 1096 aaKnown RBP7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 HOMEZQ8IX15 550 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 DEPDC4Q8N2C3 294 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 PDZRN3Q9UPQ7 1066 aa7.16□□□□□ -1.26
LSM1P1-201ENST00000438629 SRPK2P78362 688 aaKnown RBP7.15□□□□□ -1.26
LSM1P1-201ENST00000438629 KANK4Q5T7N3 995 aaPredicted RBP7.15□□□□□ -1.26
LSM1P1-201ENST00000438629 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
LSM1P1-201ENST00000438629 RBM19Q9Y4C8 960 aaKnown RBP7.15□□□□□ -1.26
LSM1P1-201ENST00000438629 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 J3QL48 77 aa7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 ATG7O95352 703 aa7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 RASA1P20936 1047 aa7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 ERVK-9P63128 1117 aa7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 TRIM67Q6ZTA4 783 aa7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 CDCA7Q9BWT1 371 aaPredicted RBP7.14□□□□□ -1.27
LSM1P1-201ENST00000438629 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
LSM1P1-201ENST00000438629 SMPD1P17405 629 aa7.13□□□□□ -1.27
LSM1P1-201ENST00000438629 ELOAQ14241 798 aaKnown RBP7.13□□□□□ -1.27
LSM1P1-201ENST00000438629 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
LSM1P1-201ENST00000438629 NR3C2P08235 984 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms