RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TTC24A2A3L6 582 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC13-204ENST00000438419 ZBBXA8MT70 800 aa7.59□□□□□ -1.19
TRAPPC13-204ENST00000438419 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-204ENST00000438419 CDK15Q96Q40 435 aa7.59□□□□□ -1.19
TRAPPC13-204ENST00000438419 ALDH1A1P00352 501 aa7.58□□□□□ -1.2
TRAPPC13-204ENST00000438419 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
TRAPPC13-204ENST00000438419 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
TRAPPC13-204ENST00000438419 GRM5P41594 1212 aa7.57□□□□□ -1.2
TRAPPC13-204ENST00000438419 ABL2P42684 1182 aa7.57□□□□□ -1.2
TRAPPC13-204ENST00000438419 NR1H3Q13133 447 aa7.57□□□□□ -1.2
TRAPPC13-204ENST00000438419 PRM3Q9NNZ6 103 aa7.57□□□□□ -1.2
TRAPPC13-204ENST00000438419 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-204ENST00000438419 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC13-204ENST00000438419 KCTD17Q8N5Z5 321 aa7.56□□□□□ -1.2
TRAPPC13-204ENST00000438419 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
TRAPPC13-204ENST00000438419 C14orf37Q86TY3 774 aa7.55□□□□□ -1.2
TRAPPC13-204ENST00000438419 CLUAP1Q96AJ1 413 aa7.55□□□□□ -1.2
TRAPPC13-204ENST00000438419 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
TRAPPC13-204ENST00000438419 ADH1CP00326 375 aa7.54□□□□□ -1.2
TRAPPC13-204ENST00000438419 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-204ENST00000438419 HPS1Q92902 700 aa7.54□□□□□ -1.2
TRAPPC13-204ENST00000438419 SENP2Q9HC62 589 aa7.54□□□□□ -1.2
TRAPPC13-204ENST00000438419 GMPRP36959 345 aa7.53□□□□□ -1.2
TRAPPC13-204ENST00000438419 VAC14Q08AM6 782 aa7.53□□□□□ -1.2
TRAPPC13-204ENST00000438419 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-204ENST00000438419 SLC10A4Q96EP9 437 aa7.53□□□□□ -1.2
TRAPPC13-204ENST00000438419 NR3C2P08235 984 aa7.52□□□□□ -1.2
TRAPPC13-204ENST00000438419 TRIM47Q96LD4 638 aa7.52□□□□□ -1.2
TRAPPC13-204ENST00000438419 ATP13A2Q9NQ11 1180 aa7.52□□□□□ -1.2
TRAPPC13-204ENST00000438419 WASF2Q9Y6W5 498 aa7.52□□□□□ -1.2
TRAPPC13-204ENST00000438419 RAD21O60216 631 aa7.52□□□□□ -1.21
TRAPPC13-204ENST00000438419 NNTQ13423 1086 aa7.52□□□□□ -1.21
TRAPPC13-204ENST00000438419 DZIP3Q86Y13 1208 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-204ENST00000438419 FNBP4Q8N3X1 1017 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-204ENST00000438419 KCTD15Q96SI1 283 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-204ENST00000438419 PCDHB9Q9Y5E1 797 aa7.52□□□□□ -1.21
TRAPPC13-204ENST00000438419 NR5A1Q13285 461 aa7.51□□□□□ -1.21
TRAPPC13-204ENST00000438419 KLF16Q9BXK1 252 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-204ENST00000438419 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
TRAPPC13-204ENST00000438419 A6NJR5 290 aa7.5□□□□□ -1.21
TRAPPC13-204ENST00000438419 ESPNB1AK53 854 aa7.5□□□□□ -1.21
TRAPPC13-204ENST00000438419 FSHRP23945 695 aa7.5□□□□□ -1.21
TRAPPC13-204ENST00000438419 WASHC4Q2M389 1173 aa7.5□□□□□ -1.21
TRAPPC13-204ENST00000438419 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
TRAPPC13-204ENST00000438419 GIGYF1O75420 1035 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-204ENST00000438419 INTS6LQ5JSJ4 861 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-204ENST00000438419 IRF7Q92985 503 aa7.49□□□□□ -1.21
TRAPPC13-204ENST00000438419 POM121CA8CG34 1229 aa7.48□□□□□ -1.21
TRAPPC13-204ENST00000438419 PROSER2Q86WR7 435 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-204ENST00000438419 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
TRAPPC13-204ENST00000438419 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC13-204ENST00000438419 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRAPPC13-204ENST00000438419 NBPF20Q3BBV1 942 aa7.47□□□□□ -1.21
TRAPPC13-204ENST00000438419 CEP126Q9P2H0 1117 aa7.47□□□□□ -1.21
TRAPPC13-204ENST00000438419 ZNF330Q9Y3S2 320 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC13-204ENST00000438419 TIMP2P16035 220 aa7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 KCNMA1Q12791 1236 aa7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 XP32Q5T750 250 aa7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 PPP1R26Q5T8A7 1209 aaPredicted RBP7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 WWC1Q8IX03 1113 aa7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 CCDC116Q8IYX3 515 aa7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 ZMYND15Q9H091 742 aa7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 NXF1Q9UBU9 619 aaKnown RBP7.46□□□□□ -1.21
TRAPPC13-204ENST00000438419 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-204ENST00000438419 RAB15P59190 212 aa7.45□□□□□ -1.22
TRAPPC13-204ENST00000438419 ADAMTS19Q8TE59 1207 aa7.45□□□□□ -1.22
TRAPPC13-204ENST00000438419 ITPKCQ96DU7 683 aa7.45□□□□□ -1.22
TRAPPC13-204ENST00000438419 ALG2Q9H553 416 aa7.45□□□□□ -1.22
TRAPPC13-204ENST00000438419 ZFAND3Q9H8U3 227 aa7.45□□□□□ -1.22
TRAPPC13-204ENST00000438419 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 SEPT12Q8IYM1 358 aa7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 PHTF2Q8N3S3 785 aa7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 CAPN5O15484 640 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 ZIC2O95409 532 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 EMILIN1Q9Y6C2 1016 aa7.44□□□□□ -1.22
TRAPPC13-204ENST00000438419 TRAK2O60296 914 aa7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 SOX11P35716 441 aa7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 DHX9Q08211 1270 aaKnown RBP7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 TMEM151AQ8N4L1 468 aa7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 ZNF592Q92610 1267 aa7.43□□□□□ -1.22
TRAPPC13-204ENST00000438419 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC13-204ENST00000438419 LILRA1O75019 489 aa7.41□□□□□ -1.22
TRAPPC13-204ENST00000438419 CBLBQ13191 982 aa7.41□□□□□ -1.22
TRAPPC13-204ENST00000438419 HDGFL1Q5TGJ6 251 aa7.41□□□□□ -1.22
TRAPPC13-204ENST00000438419 ZNF784Q8NCA9 323 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC13-204ENST00000438419 CHIC2Q9UKJ5 165 aa7.41□□□□□ -1.22
TRAPPC13-204ENST00000438419 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 ADD1P35611 737 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 RNF20Q5VTR2 975 aa7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 TRIM46Q7Z4K8 759 aa7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 NPAS3Q8IXF0 933 aa7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
TRAPPC13-204ENST00000438419 GDF11O95390 407 aa7.39□□□□□ -1.23
TRAPPC13-204ENST00000438419 BMP1P13497 986 aa7.39□□□□□ -1.23
TRAPPC13-204ENST00000438419 Q6ZVU0 165 aa7.39□□□□□ -1.23
TRAPPC13-204ENST00000438419 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms