RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
R3HDM1-208ENST00000438014 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
R3HDM1-208ENST00000438014 NWD2Q9ULI1 1742 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 SEMA3EO15041 775 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 KCNQ2O43526 872 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 TRIM37O94972 964 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 MFSD10Q14728 455 aa12.49□□□□□ -0.41
R3HDM1-208ENST00000438014 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
R3HDM1-208ENST00000438014 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
R3HDM1-208ENST00000438014 SIRT1Q96EB6 747 aa12.48□□□□□ -0.41
R3HDM1-208ENST00000438014 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
R3HDM1-208ENST00000438014 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
R3HDM1-208ENST00000438014 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
R3HDM1-208ENST00000438014 TECPR2O15040 1411 aa12.47□□□□□ -0.41
R3HDM1-208ENST00000438014 NINLQ9Y2I6 1382 aa12.47□□□□□ -0.41
R3HDM1-208ENST00000438014 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-208ENST00000438014 KIF1BO60333 1816 aa12.46□□□□□ -0.41
R3HDM1-208ENST00000438014 KIF1AQ12756 1690 aa12.46□□□□□ -0.41
R3HDM1-208ENST00000438014 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.41
R3HDM1-208ENST00000438014 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
R3HDM1-208ENST00000438014 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
R3HDM1-208ENST00000438014 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
R3HDM1-208ENST00000438014 PLEKHH1Q9ULM0 1364 aa12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 ZNF784Q8NCA9 323 aaPredicted RBP12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 ZC3H15Q8WU90 426 aaKnown RBP12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 PLCH1Q4KWH8 1693 aa12.44□□□□□ -0.42
R3HDM1-208ENST00000438014 ADGRB2O60241 1585 aa12.43□□□□□ -0.42
R3HDM1-208ENST00000438014 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
R3HDM1-208ENST00000438014 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
R3HDM1-208ENST00000438014 SMYD5Q6GMV2 418 aa12.42□□□□□ -0.42
R3HDM1-208ENST00000438014 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
R3HDM1-208ENST00000438014 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
R3HDM1-208ENST00000438014 GPRASP1Q5JY77 1395 aa12.42□□□□□ -0.42
R3HDM1-208ENST00000438014 SPATA31A1Q5TZJ5 1347 aa12.41□□□□□ -0.42
R3HDM1-208ENST00000438014 TIE1P35590 1138 aa12.41□□□□□ -0.42
R3HDM1-208ENST00000438014 C1QTNF8P60827 252 aa12.41□□□□□ -0.42
R3HDM1-208ENST00000438014 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
R3HDM1-208ENST00000438014 ARIH1Q9Y4X5 557 aaPredicted RBP12.41□□□□□ -0.42
R3HDM1-208ENST00000438014 ANKRD30BQ9BXX2 1392 aa12.41□□□□□ -0.42
R3HDM1-208ENST00000438014 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
R3HDM1-208ENST00000438014 RGL3Q3MIN7 710 aa12.4□□□□□ -0.42
R3HDM1-208ENST00000438014 FMN2Q9NZ56 1722 aa12.4□□□□□ -0.43
R3HDM1-208ENST00000438014 YTHDC2Q9H6S0 1430 aaKnown RBP12.39□□□□□ -0.43
R3HDM1-208ENST00000438014 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
R3HDM1-208ENST00000438014 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
R3HDM1-208ENST00000438014 STRN4Q9NRL3 753 aa12.39□□□□□ -0.43
R3HDM1-208ENST00000438014 EVA1CP58658 441 aa12.38□□□□□ -0.43
R3HDM1-208ENST00000438014 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-208ENST00000438014 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
R3HDM1-208ENST00000438014 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
R3HDM1-208ENST00000438014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.434e-6■□□□□ 9.1
R3HDM1-208ENST00000438014 POGKQ9P215 609 aa12.37□□□□□ -0.43
R3HDM1-208ENST00000438014 DHX57Q6P158 1386 aaKnown RBP12.37□□□□□ -0.43
R3HDM1-208ENST00000438014 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
R3HDM1-208ENST00000438014 PPLO60437 1756 aa12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 THSD7AQ9UPZ6 1657 aa12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 SAFB2Q14151 953 aaKnown RBP eCLIP12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 C14orf93Q9H972 538 aaKnown RBP12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 ANKARQ7Z5J8 1434 aa12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 ACIN1Q9UKV3 1341 aaKnown RBP12.36□□□□□ -0.43
R3HDM1-208ENST00000438014 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
R3HDM1-208ENST00000438014 PLSCR1O15162 318 aa12.34□□□□□ -0.43
R3HDM1-208ENST00000438014 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
R3HDM1-208ENST00000438014 TCP11L2Q8N4U5 519 aa12.34□□□□□ -0.43
R3HDM1-208ENST00000438014 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
R3HDM1-208ENST00000438014 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
R3HDM1-208ENST00000438014 TIMELESSQ9UNS1 1208 aa12.33□□□□□ -0.44
R3HDM1-208ENST00000438014 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
R3HDM1-208ENST00000438014 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 KNDC1Q76NI1 1749 aa12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 PIK3C2GO75747 1445 aa12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 PPP1R15BQ5SWA1 713 aa12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 SLC24A3Q9HC58 644 aa12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
R3HDM1-208ENST00000438014 ZC3H6P61129 1189 aaKnown RBP12.31□□□□□ -0.44
R3HDM1-208ENST00000438014 SYT17Q9BSW7 474 aa12.31□□□□□ -0.44
R3HDM1-208ENST00000438014 RREB1Q92766 1687 aa12.3□□□□□ -0.44
R3HDM1-208ENST00000438014 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
R3HDM1-208ENST00000438014 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
R3HDM1-208ENST00000438014 ERICH6Q7L0X2 663 aa12.3□□□□□ -0.44
R3HDM1-208ENST00000438014 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
R3HDM1-208ENST00000438014 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
R3HDM1-208ENST00000438014 SPATA31E1Q6ZUB1 1445 aa12.29□□□□□ -0.44
R3HDM1-208ENST00000438014 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
R3HDM1-208ENST00000438014 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
R3HDM1-208ENST00000438014 PTGER2P43116 358 aa12.29□□□□□ -0.44
R3HDM1-208ENST00000438014 LARP1Q6PKG0 1096 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-208ENST00000438014 FHDC1Q9C0D6 1143 aaPredicted RBP12.29□□□□□ -0.44
R3HDM1-208ENST00000438014 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
R3HDM1-208ENST00000438014 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms