RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
CD4-202ENST00000437800 SPATA31A3Q5VYP0 1347 aa19.39■□□□□ 0.69
CD4-202ENST00000437800 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
CD4-202ENST00000437800 CCDC136Q96JN2 1154 aa19.37■□□□□ 0.69
CD4-202ENST00000437800 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
CD4-202ENST00000437800 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
CD4-202ENST00000437800 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
CD4-202ENST00000437800 USP19O94966 1318 aa19.36■□□□□ 0.69
CD4-202ENST00000437800 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
CD4-202ENST00000437800 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
CD4-202ENST00000437800 RTL5Q5HYW3 569 aaPredicted RBP19.36■□□□□ 0.69
CD4-202ENST00000437800 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
CD4-202ENST00000437800 ARHGEF10O15013 1369 aa19.35■□□□□ 0.69
CD4-202ENST00000437800 NBR1Q14596 966 aa19.34■□□□□ 0.69
CD4-202ENST00000437800 RRP1P56182 461 aaKnown RBP19.34■□□□□ 0.69
CD4-202ENST00000437800 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
CD4-202ENST00000437800 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.69
CD4-202ENST00000437800 RCAN3Q9UKA8 241 aa19.31■□□□□ 0.68
CD4-202ENST00000437800 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
CD4-202ENST00000437800 PNPLA6Q8IY17 1366 aa19.31■□□□□ 0.68
CD4-202ENST00000437800 GCP02774 474 aa19.3■□□□□ 0.68
CD4-202ENST00000437800 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
CD4-202ENST00000437800 KCNH5Q8NCM2 988 aa19.28■□□□□ 0.68
CD4-202ENST00000437800 IL27Q8NEV9 243 aa19.28■□□□□ 0.68
CD4-202ENST00000437800 FLT4P35916 1363 aa19.28■□□□□ 0.68
CD4-202ENST00000437800 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
CD4-202ENST00000437800 HSP90AB2PQ58FF8 381 aa19.27■□□□□ 0.67
CD4-202ENST00000437800 AMPHP49418 695 aa19.26■□□□□ 0.67
CD4-202ENST00000437800 RGPD5Q99666 1765 aa19.26■□□□□ 0.67
CD4-202ENST00000437800 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
CD4-202ENST00000437800 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
CD4-202ENST00000437800 CCDC146Q8IYE0 955 aa19.25■□□□□ 0.67
CD4-202ENST00000437800 RTL1A6NKG5 1358 aa19.24■□□□□ 0.67
CD4-202ENST00000437800 DIAPH1O60610 1272 aaKnown RBP19.24■□□□□ 0.67
CD4-202ENST00000437800 HOXC9P31274 260 aa19.24■□□□□ 0.67
CD4-202ENST00000437800 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
CD4-202ENST00000437800 U2SURPO15042 1029 aaKnown RBP19.23■□□□□ 0.67
CD4-202ENST00000437800 ARHGEF25Q86VW2 580 aa19.23■□□□□ 0.67
CD4-202ENST00000437800 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
CD4-202ENST00000437800 COL18A1P39060 1754 aa19.23■□□□□ 0.67
CD4-202ENST00000437800 RGPD1P0DJD0 1748 aa19.22■□□□□ 0.67
CD4-202ENST00000437800 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
CD4-202ENST00000437800 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
CD4-202ENST00000437800 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
CD4-202ENST00000437800 IL13P35225 146 aa19.21■□□□□ 0.67
CD4-202ENST00000437800 HAP1P54257 671 aaPredicted RBP19.21■□□□□ 0.67
CD4-202ENST00000437800 APAF1O14727 1248 aa19.21■□□□□ 0.67
CD4-202ENST00000437800 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
CD4-202ENST00000437800 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
CD4-202ENST00000437800 RGPD2P0DJD1 1756 aa19.2■□□□□ 0.66
CD4-202ENST00000437800 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
CD4-202ENST00000437800 CHRNA2Q15822 529 aa19.19■□□□□ 0.66
CD4-202ENST00000437800 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.19■□□□□ 0.66
CD4-202ENST00000437800 IP6K1Q92551 441 aa19.19■□□□□ 0.66
CD4-202ENST00000437800 LTV1Q96GA3 475 aaPredicted RBP19.19■□□□□ 0.66
CD4-202ENST00000437800 CPDO75976 1380 aa19.18■□□□□ 0.66
CD4-202ENST00000437800 EXOC6Q8TAG9 804 aa19.18■□□□□ 0.66
CD4-202ENST00000437800 LMO7Q8WWI1 1683 aa19.18■□□□□ 0.66
CD4-202ENST00000437800 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
CD4-202ENST00000437800 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
CD4-202ENST00000437800 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
CD4-202ENST00000437800 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
CD4-202ENST00000437800 ABCC6O95255 1503 aa19.17■□□□□ 0.66
CD4-202ENST00000437800 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
CD4-202ENST00000437800 HMOX1P09601 288 aa19.16■□□□□ 0.66
CD4-202ENST00000437800 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
CD4-202ENST00000437800 HSPA1LP34931 641 aa19.15■□□□□ 0.66
CD4-202ENST00000437800 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
CD4-202ENST00000437800 MS4A1P11836 297 aa19.14■□□□□ 0.65
CD4-202ENST00000437800 AEBP1Q8IUX7 1158 aa19.14■□□□□ 0.65
CD4-202ENST00000437800 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.65
CD4-202ENST00000437800 ZBTB47Q9UFB7 747 aaPredicted RBP19.14■□□□□ 0.65
CD4-202ENST00000437800 CAMTA1Q9Y6Y1 1673 aa19.13■□□□□ 0.65
CD4-202ENST00000437800 JCADQ9P266 1359 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
CD4-202ENST00000437800 ERBB3P21860 1342 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 TCP11L2Q8N4U5 519 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 EYA1Q99502 592 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
CD4-202ENST00000437800 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
CD4-202ENST00000437800 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
CD4-202ENST00000437800 IGSF1Q8N6C5 1336 aa19.11■□□□□ 0.65
CD4-202ENST00000437800 NUTM2BA6NNL0 878 aaPredicted RBP19.11■□□□□ 0.65
CD4-202ENST00000437800 NUTM2EB1AL46 878 aaPredicted RBP19.11■□□□□ 0.65
CD4-202ENST00000437800 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
CD4-202ENST00000437800 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
CD4-202ENST00000437800 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
CD4-202ENST00000437800 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
CD4-202ENST00000437800 SULT6B1Q6IMI4 303 aa19.1■□□□□ 0.65
CD4-202ENST00000437800 TRMT2AQ8IZ69 625 aaKnown RBP19.1■□□□□ 0.65
CD4-202ENST00000437800 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
CD4-202ENST00000437800 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
CD4-202ENST00000437800 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
CD4-202ENST00000437800 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
CD4-202ENST00000437800 WWC1Q8IX03 1113 aa19.09■□□□□ 0.65
CD4-202ENST00000437800 SPINK5Q9NQ38 1064 aaPredicted RBP19.09■□□□□ 0.65
CD4-202ENST00000437800 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms