RNA–Protein interactions for RNA: ENST00000436963.1

LINC00441-202, humanhuman

TSL 3

Gene LINC00441, Length 220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00441-202ENST00000436963 BCL9O00512 1426 aa17.29■□□□□ 0.36
LINC00441-202ENST00000436963 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
LINC00441-202ENST00000436963 PPLO60437 1756 aa17.28■□□□□ 0.36
LINC00441-202ENST00000436963 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.36
LINC00441-202ENST00000436963 DDB1Q16531 1140 aa17.27■□□□□ 0.36
LINC00441-202ENST00000436963 RGS19P49795 217 aa17.26■□□□□ 0.35
LINC00441-202ENST00000436963 MARCH10Q8NA82 808 aaPredicted RBP17.26■□□□□ 0.35
LINC00441-202ENST00000436963 ABHD8Q96I13 439 aa17.26■□□□□ 0.35
LINC00441-202ENST00000436963 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
LINC00441-202ENST00000436963 PNPLA7Q6ZV29 1317 aa17.24■□□□□ 0.35
LINC00441-202ENST00000436963 C16orf71Q8IYS4 520 aaPredicted RBP17.24■□□□□ 0.35
LINC00441-202ENST00000436963 CICQ96RK0 1608 aaPredicted RBP17.23■□□□□ 0.35
LINC00441-202ENST00000436963 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
LINC00441-202ENST00000436963 PRDM10Q9NQV6 1147 aa17.23■□□□□ 0.35
LINC00441-202ENST00000436963 GPRASP1Q5JY77 1395 aa17.23■□□□□ 0.35
LINC00441-202ENST00000436963 BTAF1O14981 1849 aa17.23■□□□□ 0.35
LINC00441-202ENST00000436963 FOXN1O15353 648 aa17.22■□□□□ 0.35
LINC00441-202ENST00000436963 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
LINC00441-202ENST00000436963 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.34
LINC00441-202ENST00000436963 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
LINC00441-202ENST00000436963 LRRC4BQ9NT99 713 aa17.2■□□□□ 0.34
LINC00441-202ENST00000436963 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
LINC00441-202ENST00000436963 CRB1P82279 1406 aa17.19■□□□□ 0.34
LINC00441-202ENST00000436963 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
LINC00441-202ENST00000436963 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
LINC00441-202ENST00000436963 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
LINC00441-202ENST00000436963 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
LINC00441-202ENST00000436963 NUP155O75694 1391 aa17.15■□□□□ 0.34
LINC00441-202ENST00000436963 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
LINC00441-202ENST00000436963 CCDC85CA6NKD9 419 aa17.14■□□□□ 0.33
LINC00441-202ENST00000436963 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
LINC00441-202ENST00000436963 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
LINC00441-202ENST00000436963 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
LINC00441-202ENST00000436963 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
LINC00441-202ENST00000436963 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
LINC00441-202ENST00000436963 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
LINC00441-202ENST00000436963 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
LINC00441-202ENST00000436963 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
LINC00441-202ENST00000436963 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
LINC00441-202ENST00000436963 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
LINC00441-202ENST00000436963 CPDO75976 1380 aa17.1■□□□□ 0.33
LINC00441-202ENST00000436963 ANKRD30BQ9BXX2 1392 aa17.1■□□□□ 0.33
LINC00441-202ENST00000436963 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
LINC00441-202ENST00000436963 ACSBG1Q96GR2 724 aa17.09■□□□□ 0.33
LINC00441-202ENST00000436963 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
LINC00441-202ENST00000436963 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
LINC00441-202ENST00000436963 YTHDC2Q9H6S0 1430 aaKnown RBP17.08■□□□□ 0.32
LINC00441-202ENST00000436963 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
LINC00441-202ENST00000436963 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.32
LINC00441-202ENST00000436963 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
LINC00441-202ENST00000436963 PXDNLA1KZ92 1463 aa17.06■□□□□ 0.32
LINC00441-202ENST00000436963 MSH5O43196 834 aa17.05■□□□□ 0.32
LINC00441-202ENST00000436963 LBX1P52954 281 aa17.05■□□□□ 0.32
LINC00441-202ENST00000436963 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
LINC00441-202ENST00000436963 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
LINC00441-202ENST00000436963 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
LINC00441-202ENST00000436963 USP6P35125 1406 aa17.04■□□□□ 0.32
LINC00441-202ENST00000436963 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
LINC00441-202ENST00000436963 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
LINC00441-202ENST00000436963 SIRT1Q96EB6 747 aa17.03■□□□□ 0.32
LINC00441-202ENST00000436963 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
LINC00441-202ENST00000436963 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
LINC00441-202ENST00000436963 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
LINC00441-202ENST00000436963 KCNQ4P56696 695 aa17.01■□□□□ 0.31
LINC00441-202ENST00000436963 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
LINC00441-202ENST00000436963 AIDAQ96BJ3 306 aa17.01■□□□□ 0.31
LINC00441-202ENST00000436963 CDCA7Q9BWT1 371 aaPredicted RBP17.01■□□□□ 0.31
LINC00441-202ENST00000436963 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
LINC00441-202ENST00000436963 LY75O60449 1722 aa17■□□□□ 0.31
LINC00441-202ENST00000436963 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
LINC00441-202ENST00000436963 RGPD5Q99666 1765 aa17■□□□□ 0.31
LINC00441-202ENST00000436963 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
LINC00441-202ENST00000436963 EXOC5O00471 708 aa16.99■□□□□ 0.31
LINC00441-202ENST00000436963 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
LINC00441-202ENST00000436963 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
LINC00441-202ENST00000436963 QRICH2Q9H0J4 1663 aa16.98■□□□□ 0.31
LINC00441-202ENST00000436963 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
LINC00441-202ENST00000436963 COL18A1P39060 1754 aa16.97■□□□□ 0.31
LINC00441-202ENST00000436963 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
LINC00441-202ENST00000436963 CFAP44Q96MT7 982 aa16.96■□□□□ 0.31
LINC00441-202ENST00000436963 PRAM1Q96QH2 718 aa16.96■□□□□ 0.31
LINC00441-202ENST00000436963 C9orf131Q5VYM1 1079 aa16.94■□□□□ 0.3
LINC00441-202ENST00000436963 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
LINC00441-202ENST00000436963 ABCC6O95255 1503 aa16.94■□□□□ 0.3
LINC00441-202ENST00000436963 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
LINC00441-202ENST00000436963 SBF1O95248 1867 aa16.93■□□□□ 0.3
LINC00441-202ENST00000436963 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
LINC00441-202ENST00000436963 HSPA8P11142 646 aaKnown RBP16.93■□□□□ 0.3
LINC00441-202ENST00000436963 KIF13BQ9NQT8 1826 aa16.92■□□□□ 0.3
LINC00441-202ENST00000436963 GCP02774 474 aa16.92■□□□□ 0.3
LINC00441-202ENST00000436963 BRCA1P38398 1863 aaKnown RBP16.92■□□□□ 0.3
LINC00441-202ENST00000436963 WDR17Q8IZU2 1322 aa16.92■□□□□ 0.3
LINC00441-202ENST00000436963 PRPF38BQ5VTL8 546 aaKnown RBP16.91■□□□□ 0.3
LINC00441-202ENST00000436963 WBP1LQ9NX94 342 aa16.91■□□□□ 0.3
LINC00441-202ENST00000436963 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
LINC00441-202ENST00000436963 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
LINC00441-202ENST00000436963 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
LINC00441-202ENST00000436963 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.3
LINC00441-202ENST00000436963 PIK3C2GO75747 1445 aa16.89■□□□□ 0.29
LINC00441-202ENST00000436963 BCS1LQ9Y276 419 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms