RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 PEAK1Q9H792 1746 aa28.76■■■□□ 2.19
COL6A2-206ENST00000436769 CD163L1Q9NR16 1453 aa28.76■■■□□ 2.19
COL6A2-206ENST00000436769 NFAT5O94916 1531 aa28.75■■■□□ 2.19
COL6A2-206ENST00000436769 TONSLQ96HA7 1378 aa28.74■■■□□ 2.19
COL6A2-206ENST00000436769 RREB1Q92766 1687 aa28.74■■■□□ 2.19
COL6A2-206ENST00000436769 LRRC37A3O60309 1634 aa28.73■■■□□ 2.19
COL6A2-206ENST00000436769 SOX12O15370 315 aa28.73■■■□□ 2.19
COL6A2-206ENST00000436769 WNK3Q9BYP7 1800 aa28.72■■■□□ 2.19
COL6A2-206ENST00000436769 USP31Q70CQ4 1352 aa28.72■■■□□ 2.19
COL6A2-206ENST00000436769 SBF2Q86WG5 1849 aa28.71■■■□□ 2.19
COL6A2-206ENST00000436769 C11orf95C9JLR9 678 aaPredicted RBP28.71■■■□□ 2.19
COL6A2-206ENST00000436769 DDB1Q16531 1140 aa28.71■■■□□ 2.19
COL6A2-206ENST00000436769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.7■■■□□ 2.18
COL6A2-206ENST00000436769 SLC12A5Q9H2X9 1139 aa28.7■■■□□ 2.18
COL6A2-206ENST00000436769 USP54Q70EL1 1684 aa28.7■■■□□ 2.18
COL6A2-206ENST00000436769 CARD10Q9BWT7 1032 aa28.69■■■□□ 2.18
COL6A2-206ENST00000436769 NUP188Q5SRE5 1749 aa28.69■■■□□ 2.18
COL6A2-206ENST00000436769 OVOS2A0A0G2JMS6 1433 aa28.69■■■□□ 2.18
COL6A2-206ENST00000436769 OVOS2A0A0J9YW53 1432 aa28.69■■■□□ 2.18
COL6A2-206ENST00000436769 OVOS2Q6IE36 1432 aa28.69■■■□□ 2.18
COL6A2-206ENST00000436769 NME9Q86XW9 330 aa28.67■■■□□ 2.18
COL6A2-206ENST00000436769 TMC1Q8TDI8 760 aa28.67■■■□□ 2.18
COL6A2-206ENST00000436769 PUS7Q96PZ0 661 aaKnown RBP28.67■■■□□ 2.18
COL6A2-206ENST00000436769 CDCA7Q9BWT1 371 aaPredicted RBP28.66■■■□□ 2.18
COL6A2-206ENST00000436769 ABCC6O95255 1503 aa28.65■■■□□ 2.18
COL6A2-206ENST00000436769 MARCH10Q8NA82 808 aaPredicted RBP28.65■■■□□ 2.18
COL6A2-206ENST00000436769 CSB-PGBD3P0DP91 1061 aa28.64■■■□□ 2.18
COL6A2-206ENST00000436769 PTF1AQ7RTS3 328 aa28.63■■■□□ 2.17
COL6A2-206ENST00000436769 HDGFL2Q7Z4V5 671 aaPredicted RBP28.63■■■□□ 2.17
COL6A2-206ENST00000436769 TESK2Q96S53 571 aa28.63■■■□□ 2.17
COL6A2-206ENST00000436769 BCL9O00512 1426 aa28.61■■■□□ 2.17
COL6A2-206ENST00000436769 A0A1W2PP64 1363 aa28.61■■■□□ 2.17
COL6A2-206ENST00000436769 EDC4Q6P2E9 1401 aaKnown RBP28.6■■■□□ 2.17
COL6A2-206ENST00000436769 PLSCR1O15162 318 aa28.6■■■□□ 2.17
COL6A2-206ENST00000436769 BCL11BQ9C0K0 894 aaPredicted RBP28.6■■■□□ 2.17
COL6A2-206ENST00000436769 LTN1O94822 1766 aa28.6■■■□□ 2.17
COL6A2-206ENST00000436769 ST20-MTHFSA0A0A6YYL1 179 aa28.59■■■□□ 2.17
COL6A2-206ENST00000436769 NBPF14Q5TI25 921 aa28.59■■■□□ 2.17
COL6A2-206ENST00000436769 TERF2IPQ9NYB0 399 aa28.59■■■□□ 2.17
COL6A2-206ENST00000436769 RGPD3A6NKT7 1758 aaPredicted RBP28.59■■■□□ 2.17
COL6A2-206ENST00000436769 RGPD4Q7Z3J3 1758 aa28.59■■■□□ 2.17
COL6A2-206ENST00000436769 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
COL6A2-206ENST00000436769 TRIM26Q12899 539 aaPredicted RBP28.58■■■□□ 2.17
COL6A2-206ENST00000436769 EXOC5O00471 708 aa28.56■■■□□ 2.16
COL6A2-206ENST00000436769 ERBB3P21860 1342 aa28.56■■■□□ 2.16
COL6A2-206ENST00000436769 PROM2Q8N271 834 aa28.53■■■□□ 2.16
COL6A2-206ENST00000436769 TNS2Q63HR2 1409 aa28.51■■■□□ 2.15
COL6A2-206ENST00000436769 NINLQ9Y2I6 1382 aa28.5■■■□□ 2.15
COL6A2-206ENST00000436769 NLRP2Q9NX02 1062 aa28.5■■■□□ 2.15
COL6A2-206ENST00000436769 SLC24A1O60721 1099 aa28.49■■■□□ 2.15
COL6A2-206ENST00000436769 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
COL6A2-206ENST00000436769 ANO8Q9HCE9 1232 aaPredicted RBP28.47■■■□□ 2.15
COL6A2-206ENST00000436769 IP6K1Q92551 441 aa28.46■■■□□ 2.15
COL6A2-206ENST00000436769 KCNQ2O43526 872 aa28.45■■■□□ 2.14
COL6A2-206ENST00000436769 IL2RBP14784 551 aa28.45■■■□□ 2.14
COL6A2-206ENST00000436769 FBLN1P23142 703 aa28.41■■■□□ 2.14
COL6A2-206ENST00000436769 TXNRD1Q16881 649 aa28.41■■■□□ 2.14
COL6A2-206ENST00000436769 COG3Q96JB2 828 aa28.41■■■□□ 2.14
COL6A2-206ENST00000436769 SPON1Q9HCB6 807 aa28.41■■■□□ 2.14
COL6A2-206ENST00000436769 NHSQ6T4R5 1651 aa28.41■■■□□ 2.14
COL6A2-206ENST00000436769 ANKRD36BQ8N2N9 1353 aa28.4■■■□□ 2.14
COL6A2-206ENST00000436769 CASZ1Q86V15 1759 aa28.39■■■□□ 2.14
COL6A2-206ENST00000436769 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.14
COL6A2-206ENST00000436769 USP47Q96K76 1375 aa28.39■■■□□ 2.14
COL6A2-206ENST00000436769 MAP3K19Q56UN5 1328 aa28.39■■■□□ 2.13
COL6A2-206ENST00000436769 ACSBG1Q96GR2 724 aa28.38■■■□□ 2.13
COL6A2-206ENST00000436769 PDGFDQ9GZP0 370 aaPredicted RBP28.38■■■□□ 2.13
COL6A2-206ENST00000436769 TMF1P82094 1093 aa28.37■■■□□ 2.13
COL6A2-206ENST00000436769 FAM208AQ9UK61 1670 aaKnown RBP28.36■■■□□ 2.13
COL6A2-206ENST00000436769 HOXC9P31274 260 aa28.36■■■□□ 2.13
COL6A2-206ENST00000436769 LTV1Q96GA3 475 aaPredicted RBP28.36■■■□□ 2.13
COL6A2-206ENST00000436769 FYB1O15117 783 aa28.35■■■□□ 2.13
COL6A2-206ENST00000436769 RGPD2P0DJD1 1756 aa28.33■■■□□ 2.13
COL6A2-206ENST00000436769 BTAF1O14981 1849 aa28.32■■■□□ 2.12
COL6A2-206ENST00000436769 AMPHP49418 695 aa28.31■■■□□ 2.12
COL6A2-206ENST00000436769 SLC15A2Q16348 729 aa28.31■■■□□ 2.12
COL6A2-206ENST00000436769 GGNBP2Q9H3C7 697 aa28.3■■■□□ 2.12
COL6A2-206ENST00000436769 STK32BQ9NY57 414 aa28.3■■■□□ 2.12
COL6A2-206ENST00000436769 PPP1R1BQ9UD71 204 aaPredicted RBP28.29■■■□□ 2.12
COL6A2-206ENST00000436769 RRS1Q15050 365 aaKnown RBP28.28■■■□□ 2.12
COL6A2-206ENST00000436769 UTRNP46939 3433 aa28.27■■■□□ 2.12
COL6A2-206ENST00000436769 DDX54Q8TDD1 881 aaKnown RBP28.27■■■□□ 2.12
COL6A2-206ENST00000436769 TIMELESSQ9UNS1 1208 aa28.27■■■□□ 2.12
COL6A2-206ENST00000436769 ZBTB7AO95365 584 aa28.26■■■□□ 2.11
COL6A2-206ENST00000436769 RTL1A6NKG5 1358 aa28.25■■■□□ 2.11
COL6A2-206ENST00000436769 PAPPAQ13219 1627 aa28.25■■■□□ 2.11
COL6A2-206ENST00000436769 PTGER2P43116 358 aa28.25■■■□□ 2.11
COL6A2-206ENST00000436769 CDCA8Q53HL2 280 aa28.25■■■□□ 2.11
COL6A2-206ENST00000436769 SHANK3Q9BYB0 1731 aa28.23■■■□□ 2.11
COL6A2-206ENST00000436769 NBPF6Q5VWK0 638 aa28.23■■■□□ 2.11
COL6A2-206ENST00000436769 NBPF4Q96M43 638 aa28.23■■■□□ 2.11
COL6A2-206ENST00000436769 CARD14Q9BXL6 1004 aa28.23■■■□□ 2.11
COL6A2-206ENST00000436769 LRRC4BQ9NT99 713 aa28.23■■■□□ 2.11
COL6A2-206ENST00000436769 KIF20BQ96Q89 1820 aa28.22■■■□□ 2.11
COL6A2-206ENST00000436769 ATF5Q9Y2D1 282 aaPredicted RBP28.22■■■□□ 2.11
COL6A2-206ENST00000436769 MEGF6O75095 1541 aa28.22■■■□□ 2.11
COL6A2-206ENST00000436769 MYOM1P52179 1685 aa28.21■■■□□ 2.11
COL6A2-206ENST00000436769 ZCRB1Q8TBF4 217 aaKnown RBP28.2■■■□□ 2.1
COL6A2-206ENST00000436769 CLSPNQ9HAW4 1339 aa28.18■■■□□ 2.1
COL6A2-206ENST00000436769 HSP90AB2PQ58FF8 381 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms