RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
NIF3L1-208ENST00000436412 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
NIF3L1-208ENST00000436412 TMEM131LA2VDJ0 1609 aa13.04□□□□□ -0.32
NIF3L1-208ENST00000436412 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
NIF3L1-208ENST00000436412 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
NIF3L1-208ENST00000436412 PPP1R3GB7ZBB8 358 aa13.03□□□□□ -0.32
NIF3L1-208ENST00000436412 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
NIF3L1-208ENST00000436412 EPAS1Q99814 870 aa13.03□□□□□ -0.32
NIF3L1-208ENST00000436412 DCCP43146 1447 aa13.03□□□□□ -0.32
NIF3L1-208ENST00000436412 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.32
NIF3L1-208ENST00000436412 LOC105371045A0A1W2PR82 267 aa13.02□□□□□ -0.33
NIF3L1-208ENST00000436412 DDX12PQ92771 950 aa13.02□□□□□ -0.33
NIF3L1-208ENST00000436412 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 AFF2P51816 1311 aa13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
NIF3L1-208ENST00000436412 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
NIF3L1-208ENST00000436412 TRPM2O94759 1503 aa12.99□□□□□ -0.33
NIF3L1-208ENST00000436412 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
NIF3L1-208ENST00000436412 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
NIF3L1-208ENST00000436412 PROX2Q3B8N5 592 aa12.98□□□□□ -0.33
NIF3L1-208ENST00000436412 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
NIF3L1-208ENST00000436412 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
NIF3L1-208ENST00000436412 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
NIF3L1-208ENST00000436412 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
NIF3L1-208ENST00000436412 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
NIF3L1-208ENST00000436412 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
NIF3L1-208ENST00000436412 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
NIF3L1-208ENST00000436412 PTPRUQ92729 1446 aa12.96□□□□□ -0.34
NIF3L1-208ENST00000436412 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-208ENST00000436412 NGLY1Q96IV0 654 aa12.95□□□□□ -0.34
NIF3L1-208ENST00000436412 MST1RQ04912 1400 aa12.95□□□□□ -0.34
NIF3L1-208ENST00000436412 EP400Q96L91 3159 aa12.95□□□□□ -0.34
NIF3L1-208ENST00000436412 UNC13BO14795 1591 aa12.94□□□□□ -0.34
NIF3L1-208ENST00000436412 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
NIF3L1-208ENST00000436412 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
NIF3L1-208ENST00000436412 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
NIF3L1-208ENST00000436412 RGS12O14924 1447 aa12.94□□□□□ -0.34
NIF3L1-208ENST00000436412 E9PCH4 1651 aa12.93□□□□□ -0.34
NIF3L1-208ENST00000436412 NBR1Q14596 966 aa12.93□□□□□ -0.34
NIF3L1-208ENST00000436412 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
NIF3L1-208ENST00000436412 PNPLA6Q8IY17 1366 aa12.93□□□□□ -0.34
NIF3L1-208ENST00000436412 XRN1Q8IZH2 1706 aaKnown RBP12.92□□□□□ -0.34
NIF3L1-208ENST00000436412 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
NIF3L1-208ENST00000436412 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
NIF3L1-208ENST00000436412 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
NIF3L1-208ENST00000436412 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-208ENST00000436412 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-208ENST00000436412 ROCK1Q13464 1354 aa12.91□□□□□ -0.34
NIF3L1-208ENST00000436412 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
NIF3L1-208ENST00000436412 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
NIF3L1-208ENST00000436412 NUP155O75694 1391 aa12.89□□□□□ -0.35
NIF3L1-208ENST00000436412 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
NIF3L1-208ENST00000436412 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-208ENST00000436412 THSD4Q6ZMP0 1018 aa12.88□□□□□ -0.35
NIF3L1-208ENST00000436412 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-208ENST00000436412 METP08581 1390 aa12.88□□□□□ -0.35
NIF3L1-208ENST00000436412 ADAMTS2O95450 1211 aa12.87□□□□□ -0.35
NIF3L1-208ENST00000436412 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-208ENST00000436412 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
NIF3L1-208ENST00000436412 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
NIF3L1-208ENST00000436412 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 MAP3K7O43318 606 aa12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 OSBPP22059 807 aa12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 FNBP4Q8N3X1 1017 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 DDX17Q92841 729 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 WNT2BQ93097 391 aa12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 USP21Q9UK80 565 aa12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 PTCH1Q13635 1447 aa12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-208ENST00000436412 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
NIF3L1-208ENST00000436412 LAMC1P11047 1609 aa12.85□□□□□ -0.35
NIF3L1-208ENST00000436412 GRXCR2A6NFK2 248 aa12.85□□□□□ -0.35
NIF3L1-208ENST00000436412 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
NIF3L1-208ENST00000436412 PTPN5P54829 565 aa12.83□□□□□ -0.36
NIF3L1-208ENST00000436412 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
NIF3L1-208ENST00000436412 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
NIF3L1-208ENST00000436412 ATRNO75882 1429 aa12.82□□□□□ -0.36
NIF3L1-208ENST00000436412 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
NIF3L1-208ENST00000436412 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
NIF3L1-208ENST00000436412 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
NIF3L1-208ENST00000436412 LAPTM4BQ86VI4 370 aa12.81□□□□□ -0.36
NIF3L1-208ENST00000436412 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-208ENST00000436412 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
NIF3L1-208ENST00000436412 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
NIF3L1-208ENST00000436412 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
NIF3L1-208ENST00000436412 NEXMIFQ5QGS0 1516 aa12.79□□□□□ -0.36
NIF3L1-208ENST00000436412 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
NIF3L1-208ENST00000436412 FAM198AQ9UFP1 575 aa12.79□□□□□ -0.36
NIF3L1-208ENST00000436412 SEPT9Q9UHD8 586 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-208ENST00000436412 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
NIF3L1-208ENST00000436412 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-208ENST00000436412 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
NIF3L1-208ENST00000436412 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
NIF3L1-208ENST00000436412 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
NIF3L1-208ENST00000436412 MYOM2P54296 1465 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms