RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 NINLQ9Y2I6 1382 aa26.43■■□□□ 1.82
UBXN1-203ENST00000436354 WDR17Q8IZU2 1322 aa26.42■■□□□ 1.82
UBXN1-203ENST00000436354 CDCA7Q9BWT1 371 aaPredicted RBP26.42■■□□□ 1.82
UBXN1-203ENST00000436354 WNK3Q9BYP7 1800 aa26.42■■□□□ 1.82
UBXN1-203ENST00000436354 EVC2Q86UK5 1308 aa26.41■■□□□ 1.82
UBXN1-203ENST00000436354 AXIN2Q9Y2T1 843 aa26.4■■□□□ 1.82
UBXN1-203ENST00000436354 CPSF1Q10570 1443 aaKnown RBP26.39■■□□□ 1.82
UBXN1-203ENST00000436354 KCNH5Q8NCM2 988 aa26.39■■□□□ 1.82
UBXN1-203ENST00000436354 ZNF692Q9BU19 519 aaPredicted RBP26.39■■□□□ 1.82
UBXN1-203ENST00000436354 AKAP12Q02952 1782 aa26.38■■□□□ 1.81
UBXN1-203ENST00000436354 BCL9O00512 1426 aa26.38■■□□□ 1.81
UBXN1-203ENST00000436354 ARHGEF25Q86VW2 580 aa26.37■■□□□ 1.81
UBXN1-203ENST00000436354 MARCH10Q8NA82 808 aaPredicted RBP26.37■■□□□ 1.81
UBXN1-203ENST00000436354 TRPM1Q7Z4N2 1603 aa26.36■■□□□ 1.81
UBXN1-203ENST00000436354 PTF1AQ7RTS3 328 aa26.36■■□□□ 1.81
UBXN1-203ENST00000436354 ANO8Q9HCE9 1232 aaPredicted RBP26.36■■□□□ 1.81
UBXN1-203ENST00000436354 CASZ1Q86V15 1759 aa26.35■■□□□ 1.81
UBXN1-203ENST00000436354 CARD10Q9BWT7 1032 aa26.35■■□□□ 1.81
UBXN1-203ENST00000436354 RGPD5Q99666 1765 aa26.35■■□□□ 1.81
UBXN1-203ENST00000436354 TTC21BQ7Z4L5 1316 aa26.35■■□□□ 1.81
UBXN1-203ENST00000436354 CSB-PGBD3P0DP91 1061 aa26.34■■□□□ 1.81
UBXN1-203ENST00000436354 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
UBXN1-203ENST00000436354 PROM2Q8N271 834 aa26.33■■□□□ 1.81
UBXN1-203ENST00000436354 TTC21AQ8NDW8 1320 aa26.33■■□□□ 1.81
UBXN1-203ENST00000436354 SOX12O15370 315 aa26.31■■□□□ 1.8
UBXN1-203ENST00000436354 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
UBXN1-203ENST00000436354 EXOC5O00471 708 aa26.3■■□□□ 1.8
UBXN1-203ENST00000436354 PDGFDQ9GZP0 370 aaPredicted RBP26.28■■□□□ 1.8
UBXN1-203ENST00000436354 CCDC7Q96M83 1385 aa26.28■■□□□ 1.8
UBXN1-203ENST00000436354 ZBTB7AO95365 584 aa26.27■■□□□ 1.8
UBXN1-203ENST00000436354 TXNRD1Q16881 649 aa26.27■■□□□ 1.8
UBXN1-203ENST00000436354 STK32BQ9NY57 414 aa26.27■■□□□ 1.8
UBXN1-203ENST00000436354 NFAT5O94916 1531 aa26.26■■□□□ 1.79
UBXN1-203ENST00000436354 ABCC6O95255 1503 aa26.26■■□□□ 1.79
UBXN1-203ENST00000436354 ROCK2O75116 1388 aaKnown RBP26.26■■□□□ 1.79
UBXN1-203ENST00000436354 KTN1Q86UP2 1357 aaKnown RBP26.26■■□□□ 1.79
UBXN1-203ENST00000436354 MYOM1P52179 1685 aa26.23■■□□□ 1.79
UBXN1-203ENST00000436354 PTGER2P43116 358 aa26.23■■□□□ 1.79
UBXN1-203ENST00000436354 SLC15A2Q16348 729 aa26.23■■□□□ 1.79
UBXN1-203ENST00000436354 TNS2Q63HR2 1409 aa26.22■■□□□ 1.79
UBXN1-203ENST00000436354 ATF5Q9Y2D1 282 aaPredicted RBP26.22■■□□□ 1.79
UBXN1-203ENST00000436354 MON2Q7Z3U7 1717 aa26.21■■□□□ 1.79
UBXN1-203ENST00000436354 NHSQ6T4R5 1651 aa26.19■■□□□ 1.78
UBXN1-203ENST00000436354 SIN3AQ96ST3 1273 aa26.19■■□□□ 1.78
UBXN1-203ENST00000436354 MTFR1LQ9H019 292 aa26.18■■□□□ 1.78
UBXN1-203ENST00000436354 USP31Q70CQ4 1352 aa26.18■■□□□ 1.78
UBXN1-203ENST00000436354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.17■■□□□ 1.78
UBXN1-203ENST00000436354 NLRP2Q9NX02 1062 aa26.16■■□□□ 1.78
UBXN1-203ENST00000436354 USP54Q70EL1 1684 aa26.15■■□□□ 1.78
UBXN1-203ENST00000436354 ERBB3P21860 1342 aa26.15■■□□□ 1.78
UBXN1-203ENST00000436354 NEUROD1Q13562 356 aa26.15■■□□□ 1.78
UBXN1-203ENST00000436354 FHDC1Q9C0D6 1143 aaPredicted RBP26.15■■□□□ 1.78
UBXN1-203ENST00000436354 IL2RBP14784 551 aa26.14■■□□□ 1.78
UBXN1-203ENST00000436354 ACSBG1Q96GR2 724 aa26.14■■□□□ 1.78
UBXN1-203ENST00000436354 SYT17Q9BSW7 474 aa26.14■■□□□ 1.78
UBXN1-203ENST00000436354 SBNO2Q9Y2G9 1366 aa26.14■■□□□ 1.78
UBXN1-203ENST00000436354 LTN1O94822 1766 aa26.14■■□□□ 1.78
UBXN1-203ENST00000436354 NME9Q86XW9 330 aa26.12■■□□□ 1.77
UBXN1-203ENST00000436354 SGIP1Q9BQI5 828 aa26.11■■□□□ 1.77
UBXN1-203ENST00000436354 BTAF1O14981 1849 aa26.09■■□□□ 1.77
UBXN1-203ENST00000436354 HDGFL2Q7Z4V5 671 aaPredicted RBP26.09■■□□□ 1.77
UBXN1-203ENST00000436354 ANKRD24Q8TF21 1146 aa26.09■■□□□ 1.77
UBXN1-203ENST00000436354 PAPPAQ13219 1627 aa26.09■■□□□ 1.77
UBXN1-203ENST00000436354 CD163L1Q9NR16 1453 aa26.09■■□□□ 1.77
UBXN1-203ENST00000436354 TMC1Q8TDI8 760 aa26.08■■□□□ 1.77
UBXN1-203ENST00000436354 ZNF784Q8NCA9 323 aaPredicted RBP26.07■■□□□ 1.76
UBXN1-203ENST00000436354 ARXQ96QS3 562 aa26.07■■□□□ 1.76
UBXN1-203ENST00000436354 KAT6BQ8WYB5 2073 aa26.06■■□□□ 1.76
UBXN1-203ENST00000436354 CHD4Q14839 1912 aa26.05■■□□□ 1.76
UBXN1-203ENST00000436354 EDC4Q6P2E9 1401 aaKnown RBP26.05■■□□□ 1.76
UBXN1-203ENST00000436354 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
UBXN1-203ENST00000436354 SLC12A5Q9H2X9 1139 aa26.04■■□□□ 1.76
UBXN1-203ENST00000436354 TERF2IPQ9NYB0 399 aa26.03■■□□□ 1.76
UBXN1-203ENST00000436354 MAP3K5Q99683 1374 aa26.03■■□□□ 1.76
UBXN1-203ENST00000436354 ZNF827Q17R98 1081 aa26.01■■□□□ 1.75
UBXN1-203ENST00000436354 LRRC4BQ9NT99 713 aa26.01■■□□□ 1.75
UBXN1-203ENST00000436354 SLC27A3Q5K4L6 730 aa25.99■■□□□ 1.75
UBXN1-203ENST00000436354 IP6K1Q92551 441 aa25.99■■□□□ 1.75
UBXN1-203ENST00000436354 FAM208AQ9UK61 1670 aaKnown RBP25.99■■□□□ 1.75
UBXN1-203ENST00000436354 A0A1W2PP64 1363 aa25.98■■□□□ 1.75
UBXN1-203ENST00000436354 DDX54Q8TDD1 881 aaKnown RBP25.98■■□□□ 1.75
UBXN1-203ENST00000436354 SLC16A10Q8TF71 515 aa25.98■■□□□ 1.75
UBXN1-203ENST00000436354 PUS7Q96PZ0 661 aaKnown RBP25.98■■□□□ 1.75
UBXN1-203ENST00000436354 QSER1Q2KHR3 1735 aa25.97■■□□□ 1.75
UBXN1-203ENST00000436354 AKT1S1Q96B36 256 aa25.96■■□□□ 1.75
UBXN1-203ENST00000436354 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.74
UBXN1-203ENST00000436354 LTV1Q96GA3 475 aaPredicted RBP25.94■■□□□ 1.74
UBXN1-203ENST00000436354 POLD1P28340 1107 aa25.93■■□□□ 1.74
UBXN1-203ENST00000436354 GPR162Q16538 588 aa25.93■■□□□ 1.74
UBXN1-203ENST00000436354 UTRNP46939 3433 aa25.91■■□□□ 1.74
UBXN1-203ENST00000436354 SYTL4Q96C24 671 aaPredicted RBP25.91■■□□□ 1.74
UBXN1-203ENST00000436354 TFCP2L1Q9NZI6 479 aa25.91■■□□□ 1.74
UBXN1-203ENST00000436354 PNPLA7Q6ZV29 1317 aa25.9■■□□□ 1.74
UBXN1-203ENST00000436354 COL24A1Q17RW2 1714 aa25.9■■□□□ 1.74
UBXN1-203ENST00000436354 ANKRD36BQ8N2N9 1353 aa25.9■■□□□ 1.74
UBXN1-203ENST00000436354 PRIM1P49642 420 aaKnown RBP25.89■■□□□ 1.74
UBXN1-203ENST00000436354 KLHL34Q8N239 644 aa25.89■■□□□ 1.74
UBXN1-203ENST00000436354 COG3Q96JB2 828 aa25.89■■□□□ 1.74
UBXN1-203ENST00000436354 DOT1LQ8TEK3 1739 aa25.88■■□□□ 1.73
UBXN1-203ENST00000436354 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms