RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 PEAK1Q9H792 1746 aa21.97■■□□□ 1.11
NELFE-204ENST00000436289 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
NELFE-204ENST00000436289 CHD4Q14839 1912 aa21.93■■□□□ 1.1
NELFE-204ENST00000436289 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
NELFE-204ENST00000436289 MARCH10Q8NA82 808 aaPredicted RBP21.93■■□□□ 1.1
NELFE-204ENST00000436289 SGIP1Q9BQI5 828 aa21.92■■□□□ 1.1
NELFE-204ENST00000436289 MAP3K5Q99683 1374 aa21.91■■□□□ 1.1
NELFE-204ENST00000436289 WDR17Q8IZU2 1322 aa21.91■■□□□ 1.1
NELFE-204ENST00000436289 NLRP6P59044 892 aa21.91■■□□□ 1.1
NELFE-204ENST00000436289 PTF1AQ7RTS3 328 aa21.91■■□□□ 1.1
NELFE-204ENST00000436289 ARXQ96QS3 562 aa21.91■■□□□ 1.1
NELFE-204ENST00000436289 ARHGEF28Q8N1W1 1705 aaKnown RBP21.9■■□□□ 1.1
NELFE-204ENST00000436289 EXOC5O00471 708 aa21.9■■□□□ 1.1
NELFE-204ENST00000436289 MYOM1P52179 1685 aa21.89■■□□□ 1.1
NELFE-204ENST00000436289 TOPAZ1Q8N9V7 1692 aa21.89■■□□□ 1.1
NELFE-204ENST00000436289 ZBTB7CA1YPR0 619 aa21.88■■□□□ 1.09
NELFE-204ENST00000436289 SRPK2P78362 688 aaKnown RBP21.88■■□□□ 1.09
NELFE-204ENST00000436289 CARD10Q9BWT7 1032 aa21.88■■□□□ 1.09
NELFE-204ENST00000436289 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
NELFE-204ENST00000436289 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
NELFE-204ENST00000436289 GIGYF1O75420 1035 aaPredicted RBP21.86■■□□□ 1.09
NELFE-204ENST00000436289 GPR162Q16538 588 aa21.85■■□□□ 1.09
NELFE-204ENST00000436289 KCNH5Q8NCM2 988 aa21.85■■□□□ 1.09
NELFE-204ENST00000436289 AXIN2Q9Y2T1 843 aa21.84■■□□□ 1.09
NELFE-204ENST00000436289 CSB-PGBD3P0DP91 1061 aa21.83■■□□□ 1.09
NELFE-204ENST00000436289 SLC16A10Q8TF71 515 aa21.82■■□□□ 1.08
NELFE-204ENST00000436289 USP6P35125 1406 aa21.81■■□□□ 1.08
NELFE-204ENST00000436289 SLIT3O75094 1523 aa21.81■■□□□ 1.08
NELFE-204ENST00000436289 ARHGEF25Q86VW2 580 aa21.81■■□□□ 1.08
NELFE-204ENST00000436289 CABP1Q9NZU7 370 aa21.81■■□□□ 1.08
NELFE-204ENST00000436289 CCDC7Q96M83 1385 aa21.81■■□□□ 1.08
NELFE-204ENST00000436289 ZNF692Q9BU19 519 aaPredicted RBP21.79■■□□□ 1.08
NELFE-204ENST00000436289 CABP2Q9NPB3 220 aa21.79■■□□□ 1.08
NELFE-204ENST00000436289 AKAP12Q02952 1782 aa21.79■■□□□ 1.08
NELFE-204ENST00000436289 RAB3GAP2Q9H2M9 1393 aa21.78■■□□□ 1.08
NELFE-204ENST00000436289 CENPJQ9HC77 1338 aaPredicted RBP21.78■■□□□ 1.08
NELFE-204ENST00000436289 POLD1P28340 1107 aa21.77■■□□□ 1.08
NELFE-204ENST00000436289 CPSF1Q10570 1443 aaKnown RBP21.77■■□□□ 1.08
NELFE-204ENST00000436289 COL18A1P39060 1754 aa21.76■■□□□ 1.07
NELFE-204ENST00000436289 KIAA1210Q9ULL0 1709 aa21.74■■□□□ 1.07
NELFE-204ENST00000436289 GRIN3BO60391 1043 aa21.73■■□□□ 1.07
NELFE-204ENST00000436289 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
NELFE-204ENST00000436289 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
NELFE-204ENST00000436289 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
NELFE-204ENST00000436289 NBPF1Q3BBV0 1214 aa21.71■■□□□ 1.07
NELFE-204ENST00000436289 TTC21AQ8NDW8 1320 aa21.71■■□□□ 1.07
NELFE-204ENST00000436289 CEP350Q5VT06 3117 aa21.71■■□□□ 1.07
NELFE-204ENST00000436289 ACSBG1Q96GR2 724 aa21.7■■□□□ 1.06
NELFE-204ENST00000436289 TTC21BQ7Z4L5 1316 aa21.69■■□□□ 1.06
NELFE-204ENST00000436289 EVC2Q86UK5 1308 aa21.69■■□□□ 1.06
NELFE-204ENST00000436289 ABCC6O95255 1503 aa21.68■■□□□ 1.06
NELFE-204ENST00000436289 NHSQ6T4R5 1651 aa21.67■■□□□ 1.06
NELFE-204ENST00000436289 TRPM1Q7Z4N2 1603 aa21.67■■□□□ 1.06
NELFE-204ENST00000436289 IL2RBP14784 551 aa21.67■■□□□ 1.06
NELFE-204ENST00000436289 ZNF827Q17R98 1081 aa21.67■■□□□ 1.06
NELFE-204ENST00000436289 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
NELFE-204ENST00000436289 KLHL34Q8N239 644 aa21.67■■□□□ 1.06
NELFE-204ENST00000436289 AKT1S1Q96B36 256 aa21.67■■□□□ 1.06
NELFE-204ENST00000436289 LRRC4BQ9NT99 713 aa21.66■■□□□ 1.06
NELFE-204ENST00000436289 PAPPAQ13219 1627 aa21.66■■□□□ 1.06
NELFE-204ENST00000436289 PIK3C2AO00443 1686 aa21.65■■□□□ 1.06
NELFE-204ENST00000436289 SOX12O15370 315 aa21.64■■□□□ 1.05
NELFE-204ENST00000436289 NLRP2Q9NX02 1062 aa21.64■■□□□ 1.05
NELFE-204ENST00000436289 TFCP2L1Q9NZI6 479 aa21.64■■□□□ 1.05
NELFE-204ENST00000436289 QRICH2Q9H0J4 1663 aa21.63■■□□□ 1.05
NELFE-204ENST00000436289 ERBB3P21860 1342 aa21.62■■□□□ 1.05
NELFE-204ENST00000436289 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
NELFE-204ENST00000436289 GOLGB1Q14789 3259 aaKnown RBP21.61■■□□□ 1.05
NELFE-204ENST00000436289 RGPD5Q99666 1765 aa21.6■■□□□ 1.05
NELFE-204ENST00000436289 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
NELFE-204ENST00000436289 KAT6BQ8WYB5 2073 aa21.59■■□□□ 1.05
NELFE-204ENST00000436289 NLGN2Q8NFZ4 835 aa21.58■■□□□ 1.05
NELFE-204ENST00000436289 NFAT5O94916 1531 aa21.58■■□□□ 1.04
NELFE-204ENST00000436289 QSER1Q2KHR3 1735 aa21.58■■□□□ 1.04
NELFE-204ENST00000436289 BTAF1O14981 1849 aa21.57■■□□□ 1.04
NELFE-204ENST00000436289 GPBP1L1Q9HC44 474 aaPredicted RBP21.57■■□□□ 1.04
NELFE-204ENST00000436289 COL24A1Q17RW2 1714 aa21.57■■□□□ 1.04
NELFE-204ENST00000436289 SHANK3Q9BYB0 1731 aa21.57■■□□□ 1.04
NELFE-204ENST00000436289 HSPA6P17066 643 aa21.56■■□□□ 1.04
NELFE-204ENST00000436289 USP31Q70CQ4 1352 aa21.56■■□□□ 1.04
NELFE-204ENST00000436289 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
NELFE-204ENST00000436289 YBX3P16989 372 aaKnown RBP eCLIP21.55■■□□□ 1.047e-7■□□□□ 10.2
NELFE-204ENST00000436289 ANKRD24Q8TF21 1146 aa21.54■■□□□ 1.04
NELFE-204ENST00000436289 CD2APQ9Y5K6 639 aa21.53■■□□□ 1.04
NELFE-204ENST00000436289 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
NELFE-204ENST00000436289 DDX54Q8TDD1 881 aaKnown RBP21.52■■□□□ 1.04
NELFE-204ENST00000436289 ANKRD36BQ8N2N9 1353 aa21.49■■□□□ 1.03
NELFE-204ENST00000436289 MSH5O43196 834 aa21.49■■□□□ 1.03
NELFE-204ENST00000436289 PRIM1P49642 420 aaKnown RBP21.49■■□□□ 1.03
NELFE-204ENST00000436289 SYTL4Q96C24 671 aaPredicted RBP21.49■■□□□ 1.03
NELFE-204ENST00000436289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.48■■□□□ 1.03
NELFE-204ENST00000436289 FLAD1Q8NFF5 587 aa21.48■■□□□ 1.03
NELFE-204ENST00000436289 CCNL1Q9UK58 526 aaPredicted RBP21.47■■□□□ 1.03
NELFE-204ENST00000436289 COL23A1Q86Y22 540 aaPredicted RBP21.46■■□□□ 1.03
NELFE-204ENST00000436289 IP6K1Q92551 441 aa21.45■■□□□ 1.02
NELFE-204ENST00000436289 KCNQ4P56696 695 aa21.44■■□□□ 1.02
NELFE-204ENST00000436289 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
NELFE-204ENST00000436289 NME9Q86XW9 330 aa21.43■■□□□ 1.02
NELFE-204ENST00000436289 ADCY9O60503 1353 aa21.43■■□□□ 1.02
NELFE-204ENST00000436289 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms