RNA–Protein interactions for RNA: ENST00000435964.1

SCRN3-205, Transcript of secernin 3, humanhuman

TSL 3

Gene SCRN3, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-205ENST00000435964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.21■■■□□ 2.11
SCRN3-205ENST00000435964 ABCC6O95255 1503 aa28.21■■■□□ 2.11
SCRN3-205ENST00000435964 WDR17Q8IZU2 1322 aa28.2■■■□□ 2.11
SCRN3-205ENST00000435964 TRIM37O94972 964 aa28.2■■■□□ 2.1
SCRN3-205ENST00000435964 TERF2IPQ9NYB0 399 aa28.2■■■□□ 2.1
SCRN3-205ENST00000435964 USP31Q70CQ4 1352 aa28.19■■■□□ 2.1
SCRN3-205ENST00000435964 EDC4Q6P2E9 1401 aaKnown RBP28.18■■■□□ 2.1
SCRN3-205ENST00000435964 LRRC37A3O60309 1634 aa28.18■■■□□ 2.1
SCRN3-205ENST00000435964 C11orf95C9JLR9 678 aaPredicted RBP28.18■■■□□ 2.1
SCRN3-205ENST00000435964 AXIN2Q9Y2T1 843 aa28.18■■■□□ 2.1
SCRN3-205ENST00000435964 LTN1O94822 1766 aa28.18■■■□□ 2.1
SCRN3-205ENST00000435964 SLC12A5Q9H2X9 1139 aa28.17■■■□□ 2.1
SCRN3-205ENST00000435964 NINLQ9Y2I6 1382 aa28.16■■■□□ 2.1
SCRN3-205ENST00000435964 CSB-PGBD3P0DP91 1061 aa28.16■■■□□ 2.1
SCRN3-205ENST00000435964 ST20-MTHFSA0A0A6YYL1 179 aa28.15■■■□□ 2.1
SCRN3-205ENST00000435964 APBA3O96018 575 aa28.15■■■□□ 2.1
SCRN3-205ENST00000435964 PARD3Q8TEW0 1356 aa28.14■■■□□ 2.1
SCRN3-205ENST00000435964 A0A1W2PP64 1363 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 OVOS2A0A0G2JMS6 1433 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 OVOS2A0A0J9YW53 1432 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 OVOS2Q6IE36 1432 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 DDB1Q16531 1140 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 NME9Q86XW9 330 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 TESK2Q96S53 571 aa28.13■■■□□ 2.09
SCRN3-205ENST00000435964 CDCA7Q9BWT1 371 aaPredicted RBP28.13■■■□□ 2.09
SCRN3-205ENST00000435964 EZH2Q15910 746 aaKnown RBP28.12■■■□□ 2.09
SCRN3-205ENST00000435964 SBF2Q86WG5 1849 aa28.12■■■□□ 2.09
SCRN3-205ENST00000435964 PEAK1Q9H792 1746 aa28.12■■■□□ 2.09
SCRN3-205ENST00000435964 LRP5O75197 1615 aa28.11■■■□□ 2.09
SCRN3-205ENST00000435964 RREB1Q92766 1687 aa28.11■■■□□ 2.09
SCRN3-205ENST00000435964 CARD10Q9BWT7 1032 aa28.11■■■□□ 2.09
SCRN3-205ENST00000435964 SRCAPQ6ZRS2 3230 aa28.11■■■□□ 2.09
SCRN3-205ENST00000435964 PSDA5PKW4 1024 aaPredicted RBP28.1■■■□□ 2.09
SCRN3-205ENST00000435964 CAMKK2Q96RR4 588 aa28.1■■■□□ 2.09
SCRN3-205ENST00000435964 CCDC7Q96M83 1385 aa28.09■■■□□ 2.09
SCRN3-205ENST00000435964 USP47Q96K76 1375 aa28.07■■■□□ 2.08
SCRN3-205ENST00000435964 NUP188Q5SRE5 1749 aa28.06■■■□□ 2.08
SCRN3-205ENST00000435964 RGPD3A6NKT7 1758 aaPredicted RBP28.04■■■□□ 2.08
SCRN3-205ENST00000435964 RGPD4Q7Z3J3 1758 aa28.04■■■□□ 2.08
SCRN3-205ENST00000435964 TMF1P82094 1093 aa28.04■■■□□ 2.08
SCRN3-205ENST00000435964 R3HDM1Q15032 1099 aaKnown RBP28.03■■■□□ 2.08
SCRN3-205ENST00000435964 TIMELESSQ9UNS1 1208 aa28.03■■■□□ 2.08
SCRN3-205ENST00000435964 CLSPNQ9HAW4 1339 aa28.02■■■□□ 2.08
SCRN3-205ENST00000435964 ERBB3P21860 1342 aa28.01■■■□□ 2.07
SCRN3-205ENST00000435964 ANKRD36BQ8N2N9 1353 aa28■■■□□ 2.07
SCRN3-205ENST00000435964 EXOC5O00471 708 aa28■■■□□ 2.07
SCRN3-205ENST00000435964 FAM208AQ9UK61 1670 aaKnown RBP28■■■□□ 2.07
SCRN3-205ENST00000435964 NBPF14Q5TI25 921 aa27.99■■■□□ 2.07
SCRN3-205ENST00000435964 COG3Q96JB2 828 aa27.99■■■□□ 2.07
SCRN3-205ENST00000435964 CDCA8Q53HL2 280 aa27.98■■■□□ 2.07
SCRN3-205ENST00000435964 MARCH10Q8NA82 808 aaPredicted RBP27.98■■■□□ 2.07
SCRN3-205ENST00000435964 PCGF6Q9BYE7 350 aa27.98■■■□□ 2.07
SCRN3-205ENST00000435964 NLRP2Q9NX02 1062 aa27.98■■■□□ 2.07
SCRN3-205ENST00000435964 BCL9O00512 1426 aa27.98■■■□□ 2.07
SCRN3-205ENST00000435964 TNS2Q63HR2 1409 aa27.98■■■□□ 2.07
SCRN3-205ENST00000435964 ANKRD24Q8TF21 1146 aa27.97■■■□□ 2.07
SCRN3-205ENST00000435964 BCL11BQ9C0K0 894 aaPredicted RBP27.96■■■□□ 2.07
SCRN3-205ENST00000435964 PLSCR1O15162 318 aa27.93■■■□□ 2.06
SCRN3-205ENST00000435964 KIF20BQ96Q89 1820 aa27.92■■■□□ 2.06
SCRN3-205ENST00000435964 IP6K1Q92551 441 aa27.92■■■□□ 2.06
SCRN3-205ENST00000435964 IL2RBP14784 551 aa27.91■■■□□ 2.06
SCRN3-205ENST00000435964 NHSQ6T4R5 1651 aa27.89■■■□□ 2.06
SCRN3-205ENST00000435964 MYOM1P52179 1685 aa27.87■■■□□ 2.05
SCRN3-205ENST00000435964 AMPHP49418 695 aa27.87■■■□□ 2.05
SCRN3-205ENST00000435964 MAP3K19Q56UN5 1328 aa27.87■■■□□ 2.05
SCRN3-205ENST00000435964 KAT6BQ8WYB5 2073 aa27.86■■■□□ 2.05
SCRN3-205ENST00000435964 LTV1Q96GA3 475 aaPredicted RBP27.85■■■□□ 2.05
SCRN3-205ENST00000435964 HOXC9P31274 260 aa27.84■■■□□ 2.05
SCRN3-205ENST00000435964 PTF1AQ7RTS3 328 aa27.84■■■□□ 2.05
SCRN3-205ENST00000435964 RTL1A6NKG5 1358 aa27.84■■■□□ 2.05
SCRN3-205ENST00000435964 RGPD2P0DJD1 1756 aa27.83■■■□□ 2.05
SCRN3-205ENST00000435964 FYB1O15117 783 aa27.83■■■□□ 2.05
SCRN3-205ENST00000435964 GGNBP2Q9H3C7 697 aa27.82■■■□□ 2.04
SCRN3-205ENST00000435964 BTAF1O14981 1849 aa27.79■■■□□ 2.04
SCRN3-205ENST00000435964 FBLN1P23142 703 aa27.78■■■□□ 2.04
SCRN3-205ENST00000435964 SMG6Q86US8 1419 aaKnown RBP27.77■■■□□ 2.04
SCRN3-205ENST00000435964 ACSBG1Q96GR2 724 aa27.77■■■□□ 2.04
SCRN3-205ENST00000435964 KCNQ2O43526 872 aa27.76■■■□□ 2.03
SCRN3-205ENST00000435964 RRS1Q15050 365 aaKnown RBP27.76■■■□□ 2.03
SCRN3-205ENST00000435964 CCER1Q8TC90 406 aaPredicted RBP27.76■■■□□ 2.03
SCRN3-205ENST00000435964 TXNRD1Q16881 649 aa27.75■■■□□ 2.03
SCRN3-205ENST00000435964 NSD3Q9BZ95 1437 aa27.75■■■□□ 2.03
SCRN3-205ENST00000435964 PROM2Q8N271 834 aa27.74■■■□□ 2.03
SCRN3-205ENST00000435964 SPON1Q9HCB6 807 aa27.73■■■□□ 2.03
SCRN3-205ENST00000435964 ANO8Q9HCE9 1232 aaPredicted RBP27.73■■■□□ 2.03
SCRN3-205ENST00000435964 CASZ1Q86V15 1759 aa27.73■■■□□ 2.03
SCRN3-205ENST00000435964 DDX54Q8TDD1 881 aaKnown RBP27.72■■■□□ 2.03
SCRN3-205ENST00000435964 KIF24Q5T7B8 1368 aa27.72■■■□□ 2.03
SCRN3-205ENST00000435964 CARD14Q9BXL6 1004 aa27.71■■■□□ 2.03
SCRN3-205ENST00000435964 SHANK3Q9BYB0 1731 aa27.71■■■□□ 2.03
SCRN3-205ENST00000435964 STK32BQ9NY57 414 aa27.71■■■□□ 2.03
SCRN3-205ENST00000435964 FLT4P35916 1363 aa27.7■■■□□ 2.02
SCRN3-205ENST00000435964 DOT1LQ8TEK3 1739 aa27.7■■■□□ 2.02
SCRN3-205ENST00000435964 INSRP06213 1382 aa27.69■■■□□ 2.02
SCRN3-205ENST00000435964 EIF4G2P78344 907 aaKnown RBP eCLIP27.68■■■□□ 2.02
SCRN3-205ENST00000435964 PPP1R1BQ9UD71 204 aaPredicted RBP27.68■■■□□ 2.02
SCRN3-205ENST00000435964 ZCRB1Q8TBF4 217 aaKnown RBP27.67■■■□□ 2.02
SCRN3-205ENST00000435964 POLR3GLQ9BT43 218 aa27.67■■■□□ 2.02
SCRN3-205ENST00000435964 MAP2P11137 1827 aaKnown RBP27.67■■■□□ 2.02
SCRN3-205ENST00000435964 MEGF6O75095 1541 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms