RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
NUP50-210ENST00000434760 TCP11L2Q8N4U5 519 aa22.31■■□□□ 1.16
NUP50-210ENST00000434760 EVA1CP58658 441 aa22.3■■□□□ 1.16
NUP50-210ENST00000434760 NUP188Q5SRE5 1749 aa22.29■■□□□ 1.16
NUP50-210ENST00000434760 KCNH5Q8NCM2 988 aa22.29■■□□□ 1.16
NUP50-210ENST00000434760 SLC12A5Q9H2X9 1139 aa22.29■■□□□ 1.16
NUP50-210ENST00000434760 ZRANB1Q9UGI0 708 aa22.29■■□□□ 1.16
NUP50-210ENST00000434760 AXIN2Q9Y2T1 843 aa22.29■■□□□ 1.16
NUP50-210ENST00000434760 THRAP3Q9Y2W1 955 aaKnown RBP22.29■■□□□ 1.16
NUP50-210ENST00000434760 RGPD3A6NKT7 1758 aaPredicted RBP22.29■■□□□ 1.16
NUP50-210ENST00000434760 RGPD4Q7Z3J3 1758 aa22.29■■□□□ 1.16
NUP50-210ENST00000434760 SF3B2Q13435 895 aaKnown RBP22.28■■□□□ 1.16
NUP50-210ENST00000434760 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
NUP50-210ENST00000434760 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
NUP50-210ENST00000434760 ZBTB7CA1YPR0 619 aa22.27■■□□□ 1.16
NUP50-210ENST00000434760 NME9Q86XW9 330 aa22.27■■□□□ 1.16
NUP50-210ENST00000434760 LRP5O75197 1615 aa22.27■■□□□ 1.16
NUP50-210ENST00000434760 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.15
NUP50-210ENST00000434760 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
NUP50-210ENST00000434760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.26■■□□□ 1.15
NUP50-210ENST00000434760 SOX12O15370 315 aa22.25■■□□□ 1.15
NUP50-210ENST00000434760 TMC1Q8TDI8 760 aa22.25■■□□□ 1.15
NUP50-210ENST00000434760 BAG6P46379 1132 aa22.24■■□□□ 1.15
NUP50-210ENST00000434760 HDGFL2Q7Z4V5 671 aaPredicted RBP22.24■■□□□ 1.15
NUP50-210ENST00000434760 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
NUP50-210ENST00000434760 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
NUP50-210ENST00000434760 FAM196AQ6ZSG2 479 aa22.22■■□□□ 1.15
NUP50-210ENST00000434760 TERF2IPQ9NYB0 399 aa22.22■■□□□ 1.15
NUP50-210ENST00000434760 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
NUP50-210ENST00000434760 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
NUP50-210ENST00000434760 ERBB3P21860 1342 aa22.19■■□□□ 1.14
NUP50-210ENST00000434760 TNS2Q63HR2 1409 aa22.19■■□□□ 1.14
NUP50-210ENST00000434760 PARD3Q8TEW0 1356 aa22.18■■□□□ 1.14
NUP50-210ENST00000434760 TRIM37O94972 964 aa22.18■■□□□ 1.14
NUP50-210ENST00000434760 EN1Q05925 392 aaPredicted RBP22.18■■□□□ 1.14
NUP50-210ENST00000434760 PDE3BQ13370 1112 aa22.18■■□□□ 1.14
NUP50-210ENST00000434760 RGPD2P0DJD1 1756 aa22.17■■□□□ 1.14
NUP50-210ENST00000434760 BCL9O00512 1426 aa22.17■■□□□ 1.14
NUP50-210ENST00000434760 CCDC7Q96M83 1385 aa22.17■■□□□ 1.14
NUP50-210ENST00000434760 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
NUP50-210ENST00000434760 SLC24A1O60721 1099 aa22.16■■□□□ 1.14
NUP50-210ENST00000434760 NHSQ6T4R5 1651 aa22.16■■□□□ 1.14
NUP50-210ENST00000434760 CAMKK2Q96RR4 588 aa22.15■■□□□ 1.14
NUP50-210ENST00000434760 SHANK3Q9BYB0 1731 aa22.14■■□□□ 1.14
NUP50-210ENST00000434760 TMF1P82094 1093 aa22.14■■□□□ 1.13
NUP50-210ENST00000434760 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
NUP50-210ENST00000434760 ANKRD26Q9UPS8 1709 aa22.14■■□□□ 1.13
NUP50-210ENST00000434760 EZH2Q15910 746 aaKnown RBP22.12■■□□□ 1.13
NUP50-210ENST00000434760 DDB1Q16531 1140 aa22.12■■□□□ 1.13
NUP50-210ENST00000434760 CDCA7Q9BWT1 371 aaPredicted RBP22.11■■□□□ 1.13
NUP50-210ENST00000434760 CSB-PGBD3P0DP91 1061 aa22.1■■□□□ 1.13
NUP50-210ENST00000434760 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
NUP50-210ENST00000434760 PSDA5PKW4 1024 aaPredicted RBP22.08■■□□□ 1.13
NUP50-210ENST00000434760 C11orf95C9JLR9 678 aaPredicted RBP22.08■■□□□ 1.13
NUP50-210ENST00000434760 APBA3O96018 575 aa22.08■■□□□ 1.13
NUP50-210ENST00000434760 RTL1A6NKG5 1358 aa22.08■■□□□ 1.12
NUP50-210ENST00000434760 MAP3K19Q56UN5 1328 aa22.07■■□□□ 1.12
NUP50-210ENST00000434760 ANKRD24Q8TF21 1146 aa22.07■■□□□ 1.12
NUP50-210ENST00000434760 BTAF1O14981 1849 aa22.06■■□□□ 1.12
NUP50-210ENST00000434760 PTF1AQ7RTS3 328 aa22.05■■□□□ 1.12
NUP50-210ENST00000434760 COG3Q96JB2 828 aa22.05■■□□□ 1.12
NUP50-210ENST00000434760 IP6K1Q92551 441 aa22.04■■□□□ 1.12
NUP50-210ENST00000434760 CASZ1Q86V15 1759 aa22.04■■□□□ 1.12
NUP50-210ENST00000434760 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
NUP50-210ENST00000434760 FYB1O15117 783 aa22.03■■□□□ 1.12
NUP50-210ENST00000434760 CDCA8Q53HL2 280 aa22.03■■□□□ 1.12
NUP50-210ENST00000434760 DOT1LQ8TEK3 1739 aa22.03■■□□□ 1.12
NUP50-210ENST00000434760 FBLN1P23142 703 aa22.02■■□□□ 1.12
NUP50-210ENST00000434760 R3HDM1Q15032 1099 aaKnown RBP22.02■■□□□ 1.12
NUP50-210ENST00000434760 NLRP2Q9NX02 1062 aa22.02■■□□□ 1.12
NUP50-210ENST00000434760 PAPPAQ13219 1627 aa22.02■■□□□ 1.11
NUP50-210ENST00000434760 HOXC9P31274 260 aa22.01■■□□□ 1.11
NUP50-210ENST00000434760 MEGF6O75095 1541 aa22.01■■□□□ 1.11
NUP50-210ENST00000434760 IL2RBP14784 551 aa22■■□□□ 1.11
NUP50-210ENST00000434760 CARD14Q9BXL6 1004 aa22■■□□□ 1.11
NUP50-210ENST00000434760 GGNBP2Q9H3C7 697 aa22■■□□□ 1.11
NUP50-210ENST00000434760 BCL11BQ9C0K0 894 aaPredicted RBP21.99■■□□□ 1.11
NUP50-210ENST00000434760 MAP2P11137 1827 aaKnown RBP21.97■■□□□ 1.11
NUP50-210ENST00000434760 EXOC5O00471 708 aa21.97■■□□□ 1.11
NUP50-210ENST00000434760 PLSCR1O15162 318 aa21.97■■□□□ 1.11
NUP50-210ENST00000434760 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
NUP50-210ENST00000434760 CCER1Q8TC90 406 aaPredicted RBP21.96■■□□□ 1.11
NUP50-210ENST00000434760 PKD1L3Q7Z443 1732 aa21.96■■□□□ 1.11
NUP50-210ENST00000434760 KIF24Q5T7B8 1368 aa21.95■■□□□ 1.1
NUP50-210ENST00000434760 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
NUP50-210ENST00000434760 ANO8Q9HCE9 1232 aaPredicted RBP21.94■■□□□ 1.1
NUP50-210ENST00000434760 FLT4P35916 1363 aa21.94■■□□□ 1.1
NUP50-210ENST00000434760 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
NUP50-210ENST00000434760 INSRP06213 1382 aa21.93■■□□□ 1.1
NUP50-210ENST00000434760 AMPHP49418 695 aa21.93■■□□□ 1.1
NUP50-210ENST00000434760 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
NUP50-210ENST00000434760 LY75O60449 1722 aa21.92■■□□□ 1.1
NUP50-210ENST00000434760 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
NUP50-210ENST00000434760 KCNQ2O43526 872 aa21.91■■□□□ 1.1
NUP50-210ENST00000434760 HSPA5P11021 654 aaKnown RBP21.91■■□□□ 1.1
NUP50-210ENST00000434760 PROM2Q8N271 834 aa21.91■■□□□ 1.1
NUP50-210ENST00000434760 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
NUP50-210ENST00000434760 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
NUP50-210ENST00000434760 QSER1Q2KHR3 1735 aa21.89■■□□□ 1.1
NUP50-210ENST00000434760 EIF4G2P78344 907 aaKnown RBP eCLIP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms