RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 INSRP06213 1382 aa31.19■■■□□ 2.58
SMARCAL1-208ENST00000434435 PLCH1Q4KWH8 1693 aa31.19■■■□□ 2.58
SMARCAL1-208ENST00000434435 HOXC9P31274 260 aa31.17■■■□□ 2.58
SMARCAL1-208ENST00000434435 CCDC184Q52MB2 194 aa31.17■■■□□ 2.58
SMARCAL1-208ENST00000434435 PRDM11Q9NQV5 511 aa31.17■■■□□ 2.58
SMARCAL1-208ENST00000434435 BLMP54132 1417 aaPredicted RBP31.16■■■□□ 2.58
SMARCAL1-208ENST00000434435 NUTM2BA6NNL0 878 aaPredicted RBP31.16■■■□□ 2.58
SMARCAL1-208ENST00000434435 NUTM2EB1AL46 878 aaPredicted RBP31.16■■■□□ 2.58
SMARCAL1-208ENST00000434435 NUTM2AQ8IVF1 878 aaPredicted RBP31.16■■■□□ 2.58
SMARCAL1-208ENST00000434435 IP6K1Q92551 441 aa31.16■■■□□ 2.58
SMARCAL1-208ENST00000434435 FAM208AQ9UK61 1670 aaKnown RBP31.16■■■□□ 2.58
SMARCAL1-208ENST00000434435 LRP6O75581 1613 aa31.13■■■□□ 2.57
SMARCAL1-208ENST00000434435 NWD2Q9ULI1 1742 aa31.12■■■□□ 2.57
SMARCAL1-208ENST00000434435 CHRNA2Q15822 529 aa31.12■■■□□ 2.57
SMARCAL1-208ENST00000434435 RGPD2P0DJD1 1756 aa31.11■■■□□ 2.57
SMARCAL1-208ENST00000434435 HSP90AB2PQ58FF8 381 aa31.11■■■□□ 2.57
SMARCAL1-208ENST00000434435 ADAMTS2O95450 1211 aa31.1■■■□□ 2.57
SMARCAL1-208ENST00000434435 RGPD1P0DJD0 1748 aa31.1■■■□□ 2.57
SMARCAL1-208ENST00000434435 DIAPH1O60610 1272 aaKnown RBP31.09■■■□□ 2.57
SMARCAL1-208ENST00000434435 CAMTA1Q9Y6Y1 1673 aa31.09■■■□□ 2.57
SMARCAL1-208ENST00000434435 NRAPQ86VF7 1730 aa31.07■■■□□ 2.56
SMARCAL1-208ENST00000434435 FAM83GA6ND36 823 aa31.06■■■□□ 2.56
SMARCAL1-208ENST00000434435 NUDCQ9Y266 331 aa31.06■■■□□ 2.56
SMARCAL1-208ENST00000434435 EIF4A2Q14240 407 aaKnown RBP31.05■■■□□ 2.56
SMARCAL1-208ENST00000434435 AXIN2Q9Y2T1 843 aa31.05■■■□□ 2.56
SMARCAL1-208ENST00000434435 COL5A2P05997 1499 aaPredicted RBP31.04■■■□□ 2.56
SMARCAL1-208ENST00000434435 IL13P35225 146 aa31.03■■■□□ 2.56
SMARCAL1-208ENST00000434435 WDR43Q15061 677 aaKnown RBP eCLIP31.03■■■□□ 2.56
SMARCAL1-208ENST00000434435 ANKRD24Q8TF21 1146 aa31.02■■■□□ 2.56
SMARCAL1-208ENST00000434435 LTV1Q96GA3 475 aaPredicted RBP31.02■■■□□ 2.56
SMARCAL1-208ENST00000434435 ERBB3P21860 1342 aa31.01■■■□□ 2.56
SMARCAL1-208ENST00000434435 PNISRQ8TF01 805 aaKnown RBP31.01■■■□□ 2.55
SMARCAL1-208ENST00000434435 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.01■■■□□ 2.55
SMARCAL1-208ENST00000434435 MEX3CQ5U5Q3 659 aaKnown RBP31■■■□□ 2.55
SMARCAL1-208ENST00000434435 U2SURPO15042 1029 aaKnown RBP30.99■■■□□ 2.55
SMARCAL1-208ENST00000434435 SLIT2O94813 1529 aa30.98■■■□□ 2.55
SMARCAL1-208ENST00000434435 BTG4Q9NY30 223 aa30.98■■■□□ 2.55
SMARCAL1-208ENST00000434435 C8orf37Q96NL8 207 aa30.96■■■□□ 2.55
SMARCAL1-208ENST00000434435 U2AF1L5P0DN76 240 aaPredicted RBP30.95■■■□□ 2.55
SMARCAL1-208ENST00000434435 CSB-PGBD3P0DP91 1061 aa30.95■■■□□ 2.55
SMARCAL1-208ENST00000434435 U2AF1Q01081 240 aaKnown RBP eCLIP30.95■■■□□ 2.55
SMARCAL1-208ENST00000434435 FAM9BQ8IZU0 186 aa30.95■■■□□ 2.55
SMARCAL1-208ENST00000434435 WDR17Q8IZU2 1322 aa30.94■■■□□ 2.54
SMARCAL1-208ENST00000434435 IGSF1Q8N6C5 1336 aa30.94■■■□□ 2.54
SMARCAL1-208ENST00000434435 EVA1CP58658 441 aa30.93■■■□□ 2.54
SMARCAL1-208ENST00000434435 NGLY1Q96IV0 654 aa30.93■■■□□ 2.54
SMARCAL1-208ENST00000434435 EYA1Q99502 592 aa30.92■■■□□ 2.54
SMARCAL1-208ENST00000434435 STRN4Q9NRL3 753 aa30.92■■■□□ 2.54
SMARCAL1-208ENST00000434435 NCAPD2Q15021 1401 aa30.9■■■□□ 2.54
SMARCAL1-208ENST00000434435 WNK3Q9BYP7 1800 aa30.9■■■□□ 2.54
SMARCAL1-208ENST00000434435 ADAMTS8Q9UP79 889 aa30.9■■■□□ 2.54
SMARCAL1-208ENST00000434435 CRB1P82279 1406 aa30.89■■■□□ 2.53
SMARCAL1-208ENST00000434435 NBPF6Q5VWK0 638 aa30.88■■■□□ 2.53
SMARCAL1-208ENST00000434435 NBPF4Q96M43 638 aa30.88■■■□□ 2.53
SMARCAL1-208ENST00000434435 NLRP2Q9NX02 1062 aa30.88■■■□□ 2.53
SMARCAL1-208ENST00000434435 TOM1L2Q6ZVM7 507 aa30.87■■■□□ 2.53
SMARCAL1-208ENST00000434435 FNBP4Q8N3X1 1017 aaPredicted RBP30.87■■■□□ 2.53
SMARCAL1-208ENST00000434435 KDRP35968 1356 aa30.87■■■□□ 2.53
SMARCAL1-208ENST00000434435 HMOX1P09601 288 aa30.86■■■□□ 2.53
SMARCAL1-208ENST00000434435 SULT6B1Q6IMI4 303 aa30.86■■■□□ 2.53
SMARCAL1-208ENST00000434435 PARP4Q9UKK3 1724 aaKnown RBP30.86■■■□□ 2.53
SMARCAL1-208ENST00000434435 BCL9LQ86UU0 1499 aa30.85■■■□□ 2.53
SMARCAL1-208ENST00000434435 LARP1Q6PKG0 1096 aaKnown RBP30.85■■■□□ 2.53
SMARCAL1-208ENST00000434435 UNC5CLQ8IV45 518 aa30.84■■■□□ 2.53
SMARCAL1-208ENST00000434435 USHBP1Q8N6Y0 703 aa30.84■■■□□ 2.53
SMARCAL1-208ENST00000434435 PNNQ9H307 717 aaKnown RBP30.84■■■□□ 2.53
SMARCAL1-208ENST00000434435 AFF2P51816 1311 aa30.83■■■□□ 2.53
SMARCAL1-208ENST00000434435 FCHSD2O94868 740 aa30.83■■■□□ 2.53
SMARCAL1-208ENST00000434435 AEBP1Q8IUX7 1158 aa30.83■■■□□ 2.53
SMARCAL1-208ENST00000434435 CARD10Q9BWT7 1032 aa30.83■■■□□ 2.53
SMARCAL1-208ENST00000434435 RSPH6AQ9H0K4 717 aa30.83■■■□□ 2.53
SMARCAL1-208ENST00000434435 USP21Q9UK80 565 aa30.82■■■□□ 2.52
SMARCAL1-208ENST00000434435 PRKAR2BP31323 418 aa30.79■■■□□ 2.52
SMARCAL1-208ENST00000434435 ILDR1Q86SU0 546 aaPredicted RBP30.78■■■□□ 2.52
SMARCAL1-208ENST00000434435 CCDC146Q8IYE0 955 aa30.78■■■□□ 2.52
SMARCAL1-208ENST00000434435 NEFMP07197 916 aa30.77■■■□□ 2.52
SMARCAL1-208ENST00000434435 RUNDC1Q96C34 613 aa30.77■■■□□ 2.52
SMARCAL1-208ENST00000434435 DLG5Q8TDM6 1919 aa30.77■■■□□ 2.52
SMARCAL1-208ENST00000434435 MAPK8IP3Q9UPT6 1336 aa30.76■■■□□ 2.52
SMARCAL1-208ENST00000434435 PKD1L3Q7Z443 1732 aa30.76■■■□□ 2.52
SMARCAL1-208ENST00000434435 VPS72Q15906 364 aa30.75■■■□□ 2.51
SMARCAL1-208ENST00000434435 PLEKHF1Q96S99 279 aa30.75■■■□□ 2.51
SMARCAL1-208ENST00000434435 SPATA31A1Q5TZJ5 1347 aa30.74■■■□□ 2.51
SMARCAL1-208ENST00000434435 SPATA31A5Q5VU36 1347 aa30.74■■■□□ 2.51
SMARCAL1-208ENST00000434435 SPATA31A7Q8IWB4 1347 aa30.74■■■□□ 2.51
SMARCAL1-208ENST00000434435 CCDC9Q9Y3X0 531 aaKnown RBP30.74■■■□□ 2.51
SMARCAL1-208ENST00000434435 MEGF6O75095 1541 aa30.73■■■□□ 2.51
SMARCAL1-208ENST00000434435 RAPGEF4Q8WZA2 1011 aa30.73■■■□□ 2.51
SMARCAL1-208ENST00000434435 USP35Q9P2H5 1018 aa30.73■■■□□ 2.51
SMARCAL1-208ENST00000434435 ATRNO75882 1429 aa30.73■■■□□ 2.51
SMARCAL1-208ENST00000434435 PLEKHG2Q9H7P9 1386 aa30.72■■■□□ 2.51
SMARCAL1-208ENST00000434435 TATP17735 454 aaPredicted RBP30.7■■■□□ 2.51
SMARCAL1-208ENST00000434435 TCP11L2Q8N4U5 519 aa30.7■■■□□ 2.51
SMARCAL1-208ENST00000434435 THRAP3Q9Y2W1 955 aaKnown RBP30.7■■■□□ 2.51
SMARCAL1-208ENST00000434435 GLI3P10071 1580 aa30.7■■■□□ 2.5
SMARCAL1-208ENST00000434435 TRPC5Q9UL62 973 aaPredicted RBP30.69■■■□□ 2.5
SMARCAL1-208ENST00000434435 VIRMAQ69YN4 1812 aaKnown RBP30.68■■■□□ 2.5
SMARCAL1-208ENST00000434435 SHANK3Q9BYB0 1731 aa30.68■■■□□ 2.5
SMARCAL1-208ENST00000434435 OVOS2A0A0G2JMS6 1433 aa30.68■■■□□ 2.5
SMARCAL1-208ENST00000434435 DISP2A7MBM2 1401 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms