RNA–Protein interactions for RNA: ENST00000434073.1

PCDH9-AS3-201, PCDH9 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene PCDH9-AS3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS3-201ENST00000434073 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
PCDH9-AS3-201ENST00000434073 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-AS3-201ENST00000434073 RAD21O60216 631 aa9.46□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 ESPNB1AK53 854 aa9.45□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 PCDHB9Q9Y5E1 797 aa9.45□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 AAASQ9NRG9 546 aa9.44□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 TIMP2P16035 220 aa9.42□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 EIF4G2P78344 907 aaKnown RBP eCLIP9.42□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 VAC14Q08AM6 782 aa9.42□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 AXIN1O15169 862 aa9.41□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 SOX11P35716 441 aa9.41□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 DHX9Q08211 1270 aaKnown RBP9.41□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 CLUAP1Q96AJ1 413 aa9.41□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 A6NJR5 290 aa9.4□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 FNBP4Q8N3X1 1017 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.9
PCDH9-AS3-201ENST00000434073 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 PPP1R26Q5T8A7 1209 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 ITPKCQ96DU7 683 aa9.39□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 ZIC2O95409 532 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 RNF20Q5VTR2 975 aa9.37□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 ALG2Q9H553 416 aa9.35□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 MEIOBQ8N635 442 aa9.34□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
PCDH9-AS3-201ENST00000434073 POM121CA8CG34 1229 aa9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 RAB15P59190 212 aa9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 Q6ZVU0 165 aa9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 ZNF784Q8NCA9 323 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 LILRA1O75019 489 aa9.31□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 BMP1P13497 986 aa9.31□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 CCDC85AQ96PX6 553 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 TRAK2O60296 914 aa9.28□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 CBLBQ13191 982 aa9.28□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 SENP2Q9HC62 589 aa9.28□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 PCDHB11Q9Y5F2 797 aa9.28□□□□□ -0.92
PCDH9-AS3-201ENST00000434073 CC2D2BQ6DHV5 1058 aa9.27□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 TRIM47Q96LD4 638 aa9.27□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 TSEN34Q9BSV6 310 aaKnown RBP9.27□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 CYLDQ9NQC7 956 aa9.27□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 GMPR2Q9P2T1 348 aaKnown RBP9.27□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 ADH1AP07327 375 aa9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 ADD1P35611 737 aaKnown RBP9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 SCTRP47872 440 aa9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 GLMNQ92990 594 aa9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 ZMYND15Q9H091 742 aa9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 DOLKQ9UPQ8 538 aa9.26□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 POTECB2RU33 542 aa9.25□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 SCARF1Q14162 830 aa9.25□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 MAP7D1Q3KQU3 841 aa9.25□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 HDGFL1Q5TGJ6 251 aa9.25□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 PIK3CDO00329 1044 aa9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 UPP2O95045 317 aa9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 KDF1Q8NAX2 398 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 UCN2Q96RP3 112 aa9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 SPINT1O43278 529 aa9.23□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 OSBPL3Q9H4L5 887 aa9.23□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
PCDH9-AS3-201ENST00000434073 C11orf95C9JLR9 678 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 MYCP01106 439 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 BMP2P12643 396 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms