RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
CCDC171-202ENST00000432954 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 SRLQ86TD4 932 aa13.1□□□□□ -0.31
CCDC171-202ENST00000432954 TRIM74Q86UV6 250 aa13.1□□□□□ -0.31
CCDC171-202ENST00000432954 TRIM73Q86UV7 250 aa13.1□□□□□ -0.31
CCDC171-202ENST00000432954 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
CCDC171-202ENST00000432954 MAGEA9P43362 315 aa13.1□□□□□ -0.31
CCDC171-202ENST00000432954 AP1ARQ63HQ0 302 aa13.1□□□□□ -0.31
CCDC171-202ENST00000432954 BRD1O95696 1058 aa13.09□□□□□ -0.31
CCDC171-202ENST00000432954 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
CCDC171-202ENST00000432954 PACS2Q86VP3 889 aa13.09□□□□□ -0.31
CCDC171-202ENST00000432954 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
CCDC171-202ENST00000432954 GET4Q7L5D6 327 aaPredicted RBP13.08□□□□□ -0.31
CCDC171-202ENST00000432954 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.31
CCDC171-202ENST00000432954 ZNF396Q96N95 335 aaPredicted RBP13.08□□□□□ -0.31
CCDC171-202ENST00000432954 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.31
CCDC171-202ENST00000432954 MRS2Q9HD23 443 aa13.08□□□□□ -0.31
CCDC171-202ENST00000432954 SUN2Q9UH99 717 aa13.08□□□□□ -0.31
CCDC171-202ENST00000432954 CNTLNQ9NXG0 1405 aa13.08□□□□□ -0.32
CCDC171-202ENST00000432954 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.32
CCDC171-202ENST00000432954 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.32
CCDC171-202ENST00000432954 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
CCDC171-202ENST00000432954 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
CCDC171-202ENST00000432954 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
CCDC171-202ENST00000432954 PAX3P23760 479 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
CCDC171-202ENST00000432954 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 SLX1AQ9BQ83 275 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 SYNPO2Q9UMS6 1093 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
CCDC171-202ENST00000432954 RWDD2BP57060 319 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 NUTM2GQ5VZR2 741 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 TTC19Q6DKK2 380 aaPredicted RBP13.07□□□□□ -0.32
CCDC171-202ENST00000432954 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
CCDC171-202ENST00000432954 ARPC5LQ9BPX5 153 aa13.07□□□□□ -0.32
CCDC171-202ENST00000432954 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
CCDC171-202ENST00000432954 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
CCDC171-202ENST00000432954 CCDC26Q8TAB7 109 aa13.06□□□□□ -0.32
CCDC171-202ENST00000432954 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
CCDC171-202ENST00000432954 E2F4Q16254 413 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
CCDC171-202ENST00000432954 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
CCDC171-202ENST00000432954 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 ECEL1O95672 775 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 NAT1P18440 290 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC171-202ENST00000432954 CXorf38Q8TB03 319 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 SH3GL3Q99963 347 aa13.05□□□□□ -0.32
CCDC171-202ENST00000432954 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
CCDC171-202ENST00000432954 RIOK3O14730 519 aaKnown RBP13.04□□□□□ -0.32
CCDC171-202ENST00000432954 CPP00450 1065 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 RHBDL3P58872 404 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
CCDC171-202ENST00000432954 GPT2Q8TD30 523 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 SNRNP27Q8WVK2 155 aaKnown RBP13.04□□□□□ -0.32
CCDC171-202ENST00000432954 MIEF2Q96C03 454 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 LCMT1Q9UIC8 334 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 RRP15Q9Y3B9 282 aaKnown RBP13.04□□□□□ -0.32
CCDC171-202ENST00000432954 SYNRGQ9UMZ2 1314 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
CCDC171-202ENST00000432954 NEXNQ0ZGT2 675 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 PDCD2Q16342 344 aaPredicted RBP13.04□□□□□ -0.32
CCDC171-202ENST00000432954 STAG1Q8WVM7 1258 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
CCDC171-202ENST00000432954 WIZO95785 1651 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 TPM1P09493 284 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 RASA3Q14644 834 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC171-202ENST00000432954 SMC2O95347 1197 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 KLHL40Q2TBA0 621 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 SKAP1Q86WV1 359 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
CCDC171-202ENST00000432954 CPSF2Q9P2I0 782 aaKnown RBP13.03□□□□□ -0.32
CCDC171-202ENST00000432954 MYBL2P10244 700 aa13.02□□□□□ -0.33
CCDC171-202ENST00000432954 ICA1Q05084 483 aa13.02□□□□□ -0.33
CCDC171-202ENST00000432954 FOXD4Q12950 439 aaPredicted RBP13.02□□□□□ -0.33
CCDC171-202ENST00000432954 APBB1IPQ7Z5R6 666 aaPredicted RBP13.02□□□□□ -0.33
CCDC171-202ENST00000432954 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
CCDC171-202ENST00000432954 TMX4Q9H1E5 349 aaPredicted RBP13.02□□□□□ -0.33
CCDC171-202ENST00000432954 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
CCDC171-202ENST00000432954 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
CCDC171-202ENST00000432954 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
CCDC171-202ENST00000432954 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
CCDC171-202ENST00000432954 PES1O00541 588 aaKnown RBP13.01□□□□□ -0.33
CCDC171-202ENST00000432954 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 CCDC125Q86Z20 511 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 EFCAB13Q8IY85 973 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms