RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
RTN1-204ENST00000432103 EIF4A2Q14240 407 aaKnown RBP18.14■□□□□ 0.49
RTN1-204ENST00000432103 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
RTN1-204ENST00000432103 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
RTN1-204ENST00000432103 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
RTN1-204ENST00000432103 ROBO1Q9Y6N7 1651 aa18.13■□□□□ 0.49
RTN1-204ENST00000432103 ARHGEF25Q86VW2 580 aa18.13■□□□□ 0.49
RTN1-204ENST00000432103 PEAK1Q9H792 1746 aa18.13■□□□□ 0.49
RTN1-204ENST00000432103 APAF1O14727 1248 aa18.12■□□□□ 0.49
RTN1-204ENST00000432103 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
RTN1-204ENST00000432103 LTN1O94822 1766 aa18.1■□□□□ 0.49
RTN1-204ENST00000432103 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
RTN1-204ENST00000432103 PLEKHF1Q96S99 279 aa18.1■□□□□ 0.49
RTN1-204ENST00000432103 ABCC6O95255 1503 aa18.09■□□□□ 0.49
RTN1-204ENST00000432103 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
RTN1-204ENST00000432103 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
RTN1-204ENST00000432103 ZBTB7CA1YPR0 619 aa18.08■□□□□ 0.48
RTN1-204ENST00000432103 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
RTN1-204ENST00000432103 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
RTN1-204ENST00000432103 CPDO75976 1380 aa18.08■□□□□ 0.48
RTN1-204ENST00000432103 UBAP1LF5GYI3 381 aa18.07■□□□□ 0.48
RTN1-204ENST00000432103 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
RTN1-204ENST00000432103 HMOX1P09601 288 aa18.07■□□□□ 0.48
RTN1-204ENST00000432103 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
RTN1-204ENST00000432103 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
RTN1-204ENST00000432103 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
RTN1-204ENST00000432103 IGSF1Q8N6C5 1336 aa18.06■□□□□ 0.48
RTN1-204ENST00000432103 ZC3H6P61129 1189 aaKnown RBP18.05■□□□□ 0.48
RTN1-204ENST00000432103 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
RTN1-204ENST00000432103 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
RTN1-204ENST00000432103 RGPD1P0DJD0 1748 aa18.04■□□□□ 0.48
RTN1-204ENST00000432103 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
RTN1-204ENST00000432103 EYA1Q99502 592 aa18.04■□□□□ 0.48
RTN1-204ENST00000432103 KDRP35968 1356 aa18.03■□□□□ 0.48
RTN1-204ENST00000432103 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
RTN1-204ENST00000432103 TMPOP42166 694 aaKnown RBP18.03■□□□□ 0.48
RTN1-204ENST00000432103 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
RTN1-204ENST00000432103 LMOD3Q0VAK6 560 aa18.03■□□□□ 0.48
RTN1-204ENST00000432103 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
RTN1-204ENST00000432103 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
RTN1-204ENST00000432103 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.48
RTN1-204ENST00000432103 NEUROD2Q15784 382 aa18.02■□□□□ 0.47
RTN1-204ENST00000432103 WWC1Q8IX03 1113 aa18.02■□□□□ 0.47
RTN1-204ENST00000432103 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
RTN1-204ENST00000432103 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
RTN1-204ENST00000432103 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
RTN1-204ENST00000432103 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
RTN1-204ENST00000432103 RIPK4P57078 832 aa18.01■□□□□ 0.47
RTN1-204ENST00000432103 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
RTN1-204ENST00000432103 PRDM11Q9NQV5 511 aa18.01■□□□□ 0.47
RTN1-204ENST00000432103 KIAA0232Q92628 1395 aa18■□□□□ 0.47
RTN1-204ENST00000432103 E9PSI1 815 aa18■□□□□ 0.47
RTN1-204ENST00000432103 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
RTN1-204ENST00000432103 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
RTN1-204ENST00000432103 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
RTN1-204ENST00000432103 COL22A1Q8NFW1 1626 aaPredicted RBP17.99■□□□□ 0.47
RTN1-204ENST00000432103 ERBB3P21860 1342 aa17.98■□□□□ 0.47
RTN1-204ENST00000432103 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
RTN1-204ENST00000432103 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
RTN1-204ENST00000432103 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
RTN1-204ENST00000432103 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
RTN1-204ENST00000432103 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
RTN1-204ENST00000432103 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
RTN1-204ENST00000432103 ABCA3Q99758 1704 aa17.97■□□□□ 0.47
RTN1-204ENST00000432103 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
RTN1-204ENST00000432103 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
RTN1-204ENST00000432103 NBPF6Q5VWK0 638 aa17.96■□□□□ 0.47
RTN1-204ENST00000432103 NBPF4Q96M43 638 aa17.96■□□□□ 0.47
RTN1-204ENST00000432103 IL16Q14005 1332 aa17.96■□□□□ 0.46
RTN1-204ENST00000432103 SLFN5Q08AF3 891 aa17.95■□□□□ 0.46
RTN1-204ENST00000432103 MYH16Q9H6N6 1097 aa17.95■□□□□ 0.46
RTN1-204ENST00000432103 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
RTN1-204ENST00000432103 COL18A1P39060 1754 aa17.95■□□□□ 0.46
RTN1-204ENST00000432103 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
RTN1-204ENST00000432103 CHRNA2Q15822 529 aa17.94■□□□□ 0.46
RTN1-204ENST00000432103 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
RTN1-204ENST00000432103 TRIM35Q9UPQ4 493 aa17.93■□□□□ 0.46
RTN1-204ENST00000432103 AMOTQ4VCS5 1084 aa17.93■□□□□ 0.46
RTN1-204ENST00000432103 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
RTN1-204ENST00000432103 NLRP2Q9NX02 1062 aa17.92■□□□□ 0.46
RTN1-204ENST00000432103 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
RTN1-204ENST00000432103 TRMT2AQ8IZ69 625 aaKnown RBP17.92■□□□□ 0.46
RTN1-204ENST00000432103 PLEKHO1Q53GL0 409 aaPredicted RBP17.91■□□□□ 0.46
RTN1-204ENST00000432103 DUSP27Q5VZP5 1158 aa17.91■□□□□ 0.46
RTN1-204ENST00000432103 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
RTN1-204ENST00000432103 EVA1CP58658 441 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 WDR17Q8IZU2 1322 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 JCADQ9P266 1359 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 NEFLP07196 543 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 RAPGEF4Q8WZA2 1011 aa17.9■□□□□ 0.46
RTN1-204ENST00000432103 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
RTN1-204ENST00000432103 COL14A1Q05707 1796 aaKnown RBP17.89■□□□□ 0.45
RTN1-204ENST00000432103 RGPD5Q99666 1765 aa17.89■□□□□ 0.45
RTN1-204ENST00000432103 FAM83GA6ND36 823 aa17.89■□□□□ 0.45
RTN1-204ENST00000432103 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
RTN1-204ENST00000432103 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
RTN1-204ENST00000432103 GNAT3A8MTJ3 354 aa17.87■□□□□ 0.45
RTN1-204ENST00000432103 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms