RNA–Protein interactions for RNA: ENST00000432071.1

VAMP8-203, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-203ENST00000432071 NFAT5O94916 1531 aa20.31■□□□□ 0.84
VAMP8-203ENST00000432071 THSD7AQ9UPZ6 1657 aa20.3■□□□□ 0.84
VAMP8-203ENST00000432071 CSB-PGBD3P0DP91 1061 aa20.29■□□□□ 0.84
VAMP8-203ENST00000432071 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
VAMP8-203ENST00000432071 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
VAMP8-203ENST00000432071 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
VAMP8-203ENST00000432071 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
VAMP8-203ENST00000432071 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.84
VAMP8-203ENST00000432071 CRB1P82279 1406 aa20.27■□□□□ 0.84
VAMP8-203ENST00000432071 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
VAMP8-203ENST00000432071 SF3B2Q13435 895 aaKnown RBP20.26■□□□□ 0.83
VAMP8-203ENST00000432071 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
VAMP8-203ENST00000432071 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
VAMP8-203ENST00000432071 WDR17Q8IZU2 1322 aa20.26■□□□□ 0.83
VAMP8-203ENST00000432071 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.83
VAMP8-203ENST00000432071 PDE3BQ13370 1112 aa20.25■□□□□ 0.83
VAMP8-203ENST00000432071 COG3Q96JB2 828 aa20.25■□□□□ 0.83
VAMP8-203ENST00000432071 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
VAMP8-203ENST00000432071 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
VAMP8-203ENST00000432071 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
VAMP8-203ENST00000432071 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
VAMP8-203ENST00000432071 FYB1O15117 783 aa20.23■□□□□ 0.83
VAMP8-203ENST00000432071 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
VAMP8-203ENST00000432071 TRIM37O94972 964 aa20.22■□□□□ 0.83
VAMP8-203ENST00000432071 LTV1Q96GA3 475 aaPredicted RBP20.22■□□□□ 0.83
VAMP8-203ENST00000432071 LTN1O94822 1766 aa20.21■□□□□ 0.83
VAMP8-203ENST00000432071 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
VAMP8-203ENST00000432071 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
VAMP8-203ENST00000432071 FAM196AQ6ZSG2 479 aa20.2■□□□□ 0.82
VAMP8-203ENST00000432071 ANKRD24Q8TF21 1146 aa20.2■□□□□ 0.82
VAMP8-203ENST00000432071 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
VAMP8-203ENST00000432071 RRS1Q15050 365 aaKnown RBP20.19■□□□□ 0.82
VAMP8-203ENST00000432071 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
VAMP8-203ENST00000432071 MYOM1P52179 1685 aa20.19■□□□□ 0.82
VAMP8-203ENST00000432071 C11orf95C9JLR9 678 aaPredicted RBP20.18■□□□□ 0.82
VAMP8-203ENST00000432071 BAG6P46379 1132 aa20.17■□□□□ 0.82
VAMP8-203ENST00000432071 DDB1Q16531 1140 aa20.17■□□□□ 0.82
VAMP8-203ENST00000432071 IP6K1Q92551 441 aa20.17■□□□□ 0.82
VAMP8-203ENST00000432071 ERBB3P21860 1342 aa20.17■□□□□ 0.82
VAMP8-203ENST00000432071 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
VAMP8-203ENST00000432071 AMPHP49418 695 aa20.16■□□□□ 0.82
VAMP8-203ENST00000432071 PARP4Q9UKK3 1724 aaKnown RBP20.15■□□□□ 0.82
VAMP8-203ENST00000432071 APBA3O96018 575 aa20.14■□□□□ 0.81
VAMP8-203ENST00000432071 HOXC9P31274 260 aa20.14■□□□□ 0.81
VAMP8-203ENST00000432071 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
VAMP8-203ENST00000432071 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
VAMP8-203ENST00000432071 PTF1AQ7RTS3 328 aa20.13■□□□□ 0.81
VAMP8-203ENST00000432071 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
VAMP8-203ENST00000432071 CCDC7Q96M83 1385 aa20.12■□□□□ 0.81
VAMP8-203ENST00000432071 RGPD1P0DJD0 1748 aa20.12■□□□□ 0.81
VAMP8-203ENST00000432071 ABCC6O95255 1503 aa20.12■□□□□ 0.81
VAMP8-203ENST00000432071 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
VAMP8-203ENST00000432071 EXOC5O00471 708 aa20.11■□□□□ 0.81
VAMP8-203ENST00000432071 CDCA7Q9BWT1 371 aaPredicted RBP20.11■□□□□ 0.81
VAMP8-203ENST00000432071 PANK3Q9H999 370 aa20.11■□□□□ 0.81
VAMP8-203ENST00000432071 KIF20BQ96Q89 1820 aa20.11■□□□□ 0.81
VAMP8-203ENST00000432071 WNK3Q9BYP7 1800 aa20.11■□□□□ 0.81
VAMP8-203ENST00000432071 TNS1Q9HBL0 1735 aaKnown RBP20.1■□□□□ 0.81
VAMP8-203ENST00000432071 PSDA5PKW4 1024 aaPredicted RBP20.08■□□□□ 0.81
VAMP8-203ENST00000432071 IL2RBP14784 551 aa20.08■□□□□ 0.81
VAMP8-203ENST00000432071 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.81
VAMP8-203ENST00000432071 CAMKK2Q96RR4 588 aa20.08■□□□□ 0.81
VAMP8-203ENST00000432071 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.81
VAMP8-203ENST00000432071 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
VAMP8-203ENST00000432071 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
VAMP8-203ENST00000432071 USHBP1Q8N6Y0 703 aa20.07■□□□□ 0.8
VAMP8-203ENST00000432071 RGPD2P0DJD1 1756 aa20.06■□□□□ 0.8
VAMP8-203ENST00000432071 PPM1GO15355 546 aaPredicted RBP20.06■□□□□ 0.8
VAMP8-203ENST00000432071 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
VAMP8-203ENST00000432071 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
VAMP8-203ENST00000432071 NBPF6Q5VWK0 638 aa20.05■□□□□ 0.8
VAMP8-203ENST00000432071 NBPF4Q96M43 638 aa20.05■□□□□ 0.8
VAMP8-203ENST00000432071 ACSBG1Q96GR2 724 aa20.04■□□□□ 0.8
VAMP8-203ENST00000432071 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
VAMP8-203ENST00000432071 KCNQ2O43526 872 aa20.03■□□□□ 0.8
VAMP8-203ENST00000432071 SBF2Q86WG5 1849 aa20.03■□□□□ 0.8
VAMP8-203ENST00000432071 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.8
VAMP8-203ENST00000432071 TNS2Q63HR2 1409 aa20.02■□□□□ 0.8
VAMP8-203ENST00000432071 DDX54Q8TDD1 881 aaKnown RBP20.02■□□□□ 0.8
VAMP8-203ENST00000432071 RTL1A6NKG5 1358 aa20.01■□□□□ 0.79
VAMP8-203ENST00000432071 R3HDM1Q15032 1099 aaKnown RBP20.01■□□□□ 0.79
VAMP8-203ENST00000432071 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
VAMP8-203ENST00000432071 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
VAMP8-203ENST00000432071 INSRP06213 1382 aa19.98■□□□□ 0.79
VAMP8-203ENST00000432071 FLT4P35916 1363 aa19.98■□□□□ 0.79
VAMP8-203ENST00000432071 MAP2P11137 1827 aaKnown RBP19.98■□□□□ 0.79
VAMP8-203ENST00000432071 FAM208AQ9UK61 1670 aaKnown RBP19.97■□□□□ 0.79
VAMP8-203ENST00000432071 MEGF6O75095 1541 aa19.97■□□□□ 0.79
VAMP8-203ENST00000432071 SMG6Q86US8 1419 aaKnown RBP19.95■□□□□ 0.78
VAMP8-203ENST00000432071 PROM2Q8N271 834 aa19.95■□□□□ 0.78
VAMP8-203ENST00000432071 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
VAMP8-203ENST00000432071 BCL9O00512 1426 aa19.94■□□□□ 0.78
VAMP8-203ENST00000432071 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
VAMP8-203ENST00000432071 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
VAMP8-203ENST00000432071 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
VAMP8-203ENST00000432071 KNSTRNQ9Y448 316 aa19.94■□□□□ 0.78
VAMP8-203ENST00000432071 PLSCR1O15162 318 aa19.93■□□□□ 0.78
VAMP8-203ENST00000432071 RAPGEF4Q8WZA2 1011 aa19.93■□□□□ 0.78
VAMP8-203ENST00000432071 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
VAMP8-203ENST00000432071 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms