RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
CDH13-203ENST00000431540 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
CDH13-203ENST00000431540 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
CDH13-203ENST00000431540 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
CDH13-203ENST00000431540 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
CDH13-203ENST00000431540 ATP7BP35670 1465 aa12.11□□□□□ -0.47
CDH13-203ENST00000431540 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
CDH13-203ENST00000431540 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
CDH13-203ENST00000431540 IER5LQ5T953 404 aa12.11□□□□□ -0.47
CDH13-203ENST00000431540 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
CDH13-203ENST00000431540 DCAF11Q8TEB1 546 aa12.11□□□□□ -0.47
CDH13-203ENST00000431540 TRAK1Q9UPV9 953 aa12.11□□□□□ -0.47
CDH13-203ENST00000431540 PLEKHG3A1L390 1219 aa12.1□□□□□ -0.47
CDH13-203ENST00000431540 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
CDH13-203ENST00000431540 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
CDH13-203ENST00000431540 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
CDH13-203ENST00000431540 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
CDH13-203ENST00000431540 BARGINQ6ZT62 677 aa12.09□□□□□ -0.47
CDH13-203ENST00000431540 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
CDH13-203ENST00000431540 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
CDH13-203ENST00000431540 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
CDH13-203ENST00000431540 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDH13-203ENST00000431540 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
CDH13-203ENST00000431540 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
CDH13-203ENST00000431540 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
CDH13-203ENST00000431540 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
CDH13-203ENST00000431540 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
CDH13-203ENST00000431540 CPDO75976 1380 aa12.06□□□□□ -0.48
CDH13-203ENST00000431540 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
CDH13-203ENST00000431540 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
CDH13-203ENST00000431540 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
CDH13-203ENST00000431540 CDK19Q9BWU1 502 aa12.05□□□□□ -0.48
CDH13-203ENST00000431540 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
CDH13-203ENST00000431540 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
CDH13-203ENST00000431540 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
CDH13-203ENST00000431540 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
CDH13-203ENST00000431540 TOPAZ1Q8N9V7 1692 aa12.04□□□□□ -0.48
CDH13-203ENST00000431540 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
CDH13-203ENST00000431540 A0A0G2JS52 829 aa12.03□□□□□ -0.48
CDH13-203ENST00000431540 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CDH13-203ENST00000431540 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
CDH13-203ENST00000431540 EVA1CP58658 441 aa12.02□□□□□ -0.49
CDH13-203ENST00000431540 ACEP12821 1306 aa12.02□□□□□ -0.49
CDH13-203ENST00000431540 KIAA0232Q92628 1395 aa12.02□□□□□ -0.49
CDH13-203ENST00000431540 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
CDH13-203ENST00000431540 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
CDH13-203ENST00000431540 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
CDH13-203ENST00000431540 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
CDH13-203ENST00000431540 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
CDH13-203ENST00000431540 USP19O94966 1318 aa12.01□□□□□ -0.49
CDH13-203ENST00000431540 PARP4Q9UKK3 1724 aaKnown RBP12□□□□□ -0.49
CDH13-203ENST00000431540 RGPD3A6NKT7 1758 aaPredicted RBP12□□□□□ -0.49
CDH13-203ENST00000431540 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
CDH13-203ENST00000431540 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
CDH13-203ENST00000431540 CDCA7Q9BWT1 371 aaPredicted RBP11.99□□□□□ -0.49
CDH13-203ENST00000431540 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CDH13-203ENST00000431540 RREB1Q92766 1687 aa11.99□□□□□ -0.49
CDH13-203ENST00000431540 SBF2Q86WG5 1849 aa11.98□□□□□ -0.49
CDH13-203ENST00000431540 CAMTA1Q9Y6Y1 1673 aa11.98□□□□□ -0.49
CDH13-203ENST00000431540 PLSCR1O15162 318 aa11.98□□□□□ -0.49
CDH13-203ENST00000431540 GCP02774 474 aa11.98□□□□□ -0.49
CDH13-203ENST00000431540 BCL9O00512 1426 aa11.97□□□□□ -0.49
CDH13-203ENST00000431540 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
CDH13-203ENST00000431540 APBA3O96018 575 aa11.97□□□□□ -0.49
CDH13-203ENST00000431540 ZC3H6P61129 1189 aaKnown RBP11.97□□□□□ -0.49
CDH13-203ENST00000431540 NRKQ7Z2Y5 1582 aa11.96□□□□□ -0.49
CDH13-203ENST00000431540 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.49
CDH13-203ENST00000431540 TRIM37O94972 964 aa11.96□□□□□ -0.49
CDH13-203ENST00000431540 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
CDH13-203ENST00000431540 CRB1P82279 1406 aa11.95□□□□□ -0.5
CDH13-203ENST00000431540 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
CDH13-203ENST00000431540 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
CDH13-203ENST00000431540 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
CDH13-203ENST00000431540 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
CDH13-203ENST00000431540 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
CDH13-203ENST00000431540 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
CDH13-203ENST00000431540 SRPK2P78362 688 aaKnown RBP11.94□□□□□ -0.5
CDH13-203ENST00000431540 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
CDH13-203ENST00000431540 KCNH5Q8NCM2 988 aa11.94□□□□□ -0.5
CDH13-203ENST00000431540 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
CDH13-203ENST00000431540 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
CDH13-203ENST00000431540 EVC2Q86UK5 1308 aa11.93□□□□□ -0.5
CDH13-203ENST00000431540 COL18A1P39060 1754 aa11.93□□□□□ -0.5
CDH13-203ENST00000431540 SNPHO15079 494 aa11.93□□□□□ -0.5
CDH13-203ENST00000431540 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
CDH13-203ENST00000431540 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
CDH13-203ENST00000431540 SLIT3O75094 1523 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 USP6P35125 1406 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
CDH13-203ENST00000431540 ABCC6O95255 1503 aa11.91□□□□□ -0.5
CDH13-203ENST00000431540 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
CDH13-203ENST00000431540 PLCG2P16885 1265 aa11.91□□□□□ -0.5
CDH13-203ENST00000431540 NLRP6P59044 892 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms