RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 BARGINQ6ZT62 677 aa17.64■□□□□ 0.41
SMPD4-204ENST00000430682 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
SMPD4-204ENST00000430682 MYOM1P52179 1685 aa17.64■□□□□ 0.41
SMPD4-204ENST00000430682 CRB1P82279 1406 aa17.64■□□□□ 0.41
SMPD4-204ENST00000430682 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
SMPD4-204ENST00000430682 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
SMPD4-204ENST00000430682 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
SMPD4-204ENST00000430682 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
SMPD4-204ENST00000430682 OVOS2A0A0J9YW53 1432 aa17.62■□□□□ 0.41
SMPD4-204ENST00000430682 OVOS2Q6IE36 1432 aa17.62■□□□□ 0.41
SMPD4-204ENST00000430682 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
SMPD4-204ENST00000430682 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
SMPD4-204ENST00000430682 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
SMPD4-204ENST00000430682 WDR17Q8IZU2 1322 aa17.6■□□□□ 0.41
SMPD4-204ENST00000430682 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-204ENST00000430682 FBLN1P23142 703 aa17.58■□□□□ 0.4
SMPD4-204ENST00000430682 TMF1P82094 1093 aa17.58■□□□□ 0.4
SMPD4-204ENST00000430682 THRAP3Q9Y2W1 955 aaKnown RBP17.58■□□□□ 0.4
SMPD4-204ENST00000430682 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.4
SMPD4-204ENST00000430682 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
SMPD4-204ENST00000430682 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
SMPD4-204ENST00000430682 ABCC6O95255 1503 aa17.57■□□□□ 0.4
SMPD4-204ENST00000430682 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
SMPD4-204ENST00000430682 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
SMPD4-204ENST00000430682 TRIM37O94972 964 aa17.56■□□□□ 0.4
SMPD4-204ENST00000430682 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-204ENST00000430682 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
SMPD4-204ENST00000430682 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
SMPD4-204ENST00000430682 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
SMPD4-204ENST00000430682 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
SMPD4-204ENST00000430682 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
SMPD4-204ENST00000430682 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
SMPD4-204ENST00000430682 FYB1O15117 783 aa17.52■□□□□ 0.4
SMPD4-204ENST00000430682 BAG6P46379 1132 aa17.52■□□□□ 0.4
SMPD4-204ENST00000430682 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
SMPD4-204ENST00000430682 ERBB3P21860 1342 aa17.51■□□□□ 0.39
SMPD4-204ENST00000430682 CSB-PGBD3P0DP91 1061 aa17.51■□□□□ 0.39
SMPD4-204ENST00000430682 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
SMPD4-204ENST00000430682 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
SMPD4-204ENST00000430682 RREB1Q92766 1687 aa17.51■□□□□ 0.39
SMPD4-204ENST00000430682 EZH2Q15910 746 aaKnown RBP17.5■□□□□ 0.39
SMPD4-204ENST00000430682 DDB1Q16531 1140 aa17.5■□□□□ 0.39
SMPD4-204ENST00000430682 MARCH10Q8NA82 808 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-204ENST00000430682 HSPA5P11021 654 aaKnown RBP17.49■□□□□ 0.39
SMPD4-204ENST00000430682 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
SMPD4-204ENST00000430682 COG3Q96JB2 828 aa17.49■□□□□ 0.39
SMPD4-204ENST00000430682 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
SMPD4-204ENST00000430682 NUP188Q5SRE5 1749 aa17.49■□□□□ 0.39
SMPD4-204ENST00000430682 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
SMPD4-204ENST00000430682 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
SMPD4-204ENST00000430682 IP6K1Q92551 441 aa17.48■□□□□ 0.39
SMPD4-204ENST00000430682 APBA3O96018 575 aa17.47■□□□□ 0.39
SMPD4-204ENST00000430682 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
SMPD4-204ENST00000430682 CCDC7Q96M83 1385 aa17.47■□□□□ 0.39
SMPD4-204ENST00000430682 FAM208AQ9UK61 1670 aaKnown RBP17.47■□□□□ 0.39
SMPD4-204ENST00000430682 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
SMPD4-204ENST00000430682 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-204ENST00000430682 RRS1Q15050 365 aaKnown RBP17.46■□□□□ 0.39
SMPD4-204ENST00000430682 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
SMPD4-204ENST00000430682 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.39
SMPD4-204ENST00000430682 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
SMPD4-204ENST00000430682 C11orf95C9JLR9 678 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-204ENST00000430682 HOXC9P31274 260 aa17.45■□□□□ 0.38
SMPD4-204ENST00000430682 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-204ENST00000430682 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
SMPD4-204ENST00000430682 CDCA7Q9BWT1 371 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-204ENST00000430682 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
SMPD4-204ENST00000430682 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMPD4-204ENST00000430682 EXOC5O00471 708 aa17.42■□□□□ 0.38
SMPD4-204ENST00000430682 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
SMPD4-204ENST00000430682 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
SMPD4-204ENST00000430682 RGPD3A6NKT7 1758 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-204ENST00000430682 RGPD4Q7Z3J3 1758 aa17.41■□□□□ 0.38
SMPD4-204ENST00000430682 BCL9O00512 1426 aa17.41■□□□□ 0.38
SMPD4-204ENST00000430682 NHSQ6T4R5 1651 aa17.4■□□□□ 0.38
SMPD4-204ENST00000430682 IL2RBP14784 551 aa17.4■□□□□ 0.38
SMPD4-204ENST00000430682 AMPHP49418 695 aa17.4■□□□□ 0.38
SMPD4-204ENST00000430682 R3HDM1Q15032 1099 aaKnown RBP17.4■□□□□ 0.38
SMPD4-204ENST00000430682 KCNQ2O43526 872 aa17.39■□□□□ 0.37
SMPD4-204ENST00000430682 BTAF1O14981 1849 aa17.38■□□□□ 0.37
SMPD4-204ENST00000430682 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
SMPD4-204ENST00000430682 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
SMPD4-204ENST00000430682 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
SMPD4-204ENST00000430682 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-204ENST00000430682 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
SMPD4-204ENST00000430682 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
SMPD4-204ENST00000430682 PROM2Q8N271 834 aa17.37■□□□□ 0.37
SMPD4-204ENST00000430682 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
SMPD4-204ENST00000430682 MEGF6O75095 1541 aa17.37■□□□□ 0.37
SMPD4-204ENST00000430682 LRP5O75197 1615 aa17.36■□□□□ 0.37
SMPD4-204ENST00000430682 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
SMPD4-204ENST00000430682 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
SMPD4-204ENST00000430682 PLSCR1O15162 318 aa17.34■□□□□ 0.37
SMPD4-204ENST00000430682 INSRP06213 1382 aa17.34■□□□□ 0.37
SMPD4-204ENST00000430682 PANK3Q9H999 370 aa17.34■□□□□ 0.37
SMPD4-204ENST00000430682 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
SMPD4-204ENST00000430682 FLT4P35916 1363 aa17.33■□□□□ 0.36
SMPD4-204ENST00000430682 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
SMPD4-204ENST00000430682 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
SMPD4-204ENST00000430682 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms