RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CRB1P82279 1406 aa23.82■■□□□ 1.4
UBE3D-204ENST00000430071 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
UBE3D-204ENST00000430071 HDGFL2Q7Z4V5 671 aaPredicted RBP23.81■■□□□ 1.4
UBE3D-204ENST00000430071 PUS7Q96PZ0 661 aaKnown RBP23.81■■□□□ 1.4
UBE3D-204ENST00000430071 EDC4Q6P2E9 1401 aaKnown RBP23.81■■□□□ 1.4
UBE3D-204ENST00000430071 SBF2Q86WG5 1849 aa23.8■■□□□ 1.4
UBE3D-204ENST00000430071 SF3B2Q13435 895 aaKnown RBP23.79■■□□□ 1.4
UBE3D-204ENST00000430071 KCNH5Q8NCM2 988 aa23.79■■□□□ 1.4
UBE3D-204ENST00000430071 SRCAPQ6ZRS2 3230 aa23.79■■□□□ 1.4
UBE3D-204ENST00000430071 LRRC37A3O60309 1634 aa23.78■■□□□ 1.4
UBE3D-204ENST00000430071 TERF2IPQ9NYB0 399 aa23.78■■□□□ 1.4
UBE3D-204ENST00000430071 TRIM37O94972 964 aa23.77■■□□□ 1.4
UBE3D-204ENST00000430071 TOM1L2Q6ZVM7 507 aa23.77■■□□□ 1.4
UBE3D-204ENST00000430071 THRAP3Q9Y2W1 955 aaKnown RBP23.77■■□□□ 1.4
UBE3D-204ENST00000430071 WDR17Q8IZU2 1322 aa23.76■■□□□ 1.39
UBE3D-204ENST00000430071 MYOM1P52179 1685 aa23.76■■□□□ 1.39
UBE3D-204ENST00000430071 EN1Q05925 392 aaPredicted RBP23.76■■□□□ 1.39
UBE3D-204ENST00000430071 PEAK1Q9H792 1746 aa23.76■■□□□ 1.39
UBE3D-204ENST00000430071 PDE3BQ13370 1112 aa23.75■■□□□ 1.39
UBE3D-204ENST00000430071 OVOS2A0A0J9YW53 1432 aa23.75■■□□□ 1.39
UBE3D-204ENST00000430071 OVOS2Q6IE36 1432 aa23.75■■□□□ 1.39
UBE3D-204ENST00000430071 FBLN1P23142 703 aa23.74■■□□□ 1.39
UBE3D-204ENST00000430071 KAT6BQ8WYB5 2073 aa23.74■■□□□ 1.39
UBE3D-204ENST00000430071 RGPD2P0DJD1 1756 aa23.73■■□□□ 1.39
UBE3D-204ENST00000430071 BAG6P46379 1132 aa23.73■■□□□ 1.39
UBE3D-204ENST00000430071 FAM196AQ6ZSG2 479 aa23.73■■□□□ 1.39
UBE3D-204ENST00000430071 TMF1P82094 1093 aa23.72■■□□□ 1.39
UBE3D-204ENST00000430071 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
UBE3D-204ENST00000430071 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.38
UBE3D-204ENST00000430071 KIF20BQ96Q89 1820 aa23.7■■□□□ 1.38
UBE3D-204ENST00000430071 ANKRD36BQ8N2N9 1353 aa23.7■■□□□ 1.38
UBE3D-204ENST00000430071 ABCC6O95255 1503 aa23.69■■□□□ 1.38
UBE3D-204ENST00000430071 EZH2Q15910 746 aaKnown RBP23.69■■□□□ 1.38
UBE3D-204ENST00000430071 CARD10Q9BWT7 1032 aa23.68■■□□□ 1.38
UBE3D-204ENST00000430071 DISP2A7MBM2 1401 aa23.68■■□□□ 1.38
UBE3D-204ENST00000430071 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
UBE3D-204ENST00000430071 RREB1Q92766 1687 aa23.66■■□□□ 1.38
UBE3D-204ENST00000430071 APBA3O96018 575 aa23.65■■□□□ 1.38
UBE3D-204ENST00000430071 DDB1Q16531 1140 aa23.65■■□□□ 1.38
UBE3D-204ENST00000430071 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
UBE3D-204ENST00000430071 CAMKK2Q96RR4 588 aa23.65■■□□□ 1.38
UBE3D-204ENST00000430071 ERBB3P21860 1342 aa23.65■■□□□ 1.38
UBE3D-204ENST00000430071 PSDA5PKW4 1024 aaPredicted RBP23.65■■□□□ 1.38
UBE3D-204ENST00000430071 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
UBE3D-204ENST00000430071 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.37
UBE3D-204ENST00000430071 FYB1O15117 783 aa23.63■■□□□ 1.37
UBE3D-204ENST00000430071 ANKRD24Q8TF21 1146 aa23.63■■□□□ 1.37
UBE3D-204ENST00000430071 GGNBP2Q9H3C7 697 aa23.63■■□□□ 1.37
UBE3D-204ENST00000430071 COG3Q96JB2 828 aa23.62■■□□□ 1.37
UBE3D-204ENST00000430071 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
UBE3D-204ENST00000430071 NLRP2Q9NX02 1062 aa23.62■■□□□ 1.37
UBE3D-204ENST00000430071 OVOS2A0A0G2JMS6 1433 aa23.61■■□□□ 1.37
UBE3D-204ENST00000430071 MAP3K19Q56UN5 1328 aa23.61■■□□□ 1.37
UBE3D-204ENST00000430071 IP6K1Q92551 441 aa23.6■■□□□ 1.37
UBE3D-204ENST00000430071 LTV1Q96GA3 475 aaPredicted RBP23.6■■□□□ 1.37
UBE3D-204ENST00000430071 CCDC7Q96M83 1385 aa23.59■■□□□ 1.37
UBE3D-204ENST00000430071 FAM208AQ9UK61 1670 aaKnown RBP23.58■■□□□ 1.37
UBE3D-204ENST00000430071 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
UBE3D-204ENST00000430071 HSPA5P11021 654 aaKnown RBP23.57■■□□□ 1.36
UBE3D-204ENST00000430071 RRS1Q15050 365 aaKnown RBP23.57■■□□□ 1.36
UBE3D-204ENST00000430071 CDCA8Q53HL2 280 aa23.56■■□□□ 1.36
UBE3D-204ENST00000430071 CDCA7Q9BWT1 371 aaPredicted RBP23.56■■□□□ 1.36
UBE3D-204ENST00000430071 EXOC5O00471 708 aa23.55■■□□□ 1.36
UBE3D-204ENST00000430071 HOXC9P31274 260 aa23.55■■□□□ 1.36
UBE3D-204ENST00000430071 R3HDM1Q15032 1099 aaKnown RBP23.55■■□□□ 1.36
UBE3D-204ENST00000430071 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
UBE3D-204ENST00000430071 NSD3Q9BZ95 1437 aa23.54■■□□□ 1.36
UBE3D-204ENST00000430071 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
UBE3D-204ENST00000430071 SHANK3Q9BYB0 1731 aa23.53■■□□□ 1.36
UBE3D-204ENST00000430071 RGPD3A6NKT7 1758 aaPredicted RBP23.53■■□□□ 1.36
UBE3D-204ENST00000430071 RGPD4Q7Z3J3 1758 aa23.53■■□□□ 1.36
UBE3D-204ENST00000430071 AMPHP49418 695 aa23.52■■□□□ 1.36
UBE3D-204ENST00000430071 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.36
UBE3D-204ENST00000430071 IL2RBP14784 551 aa23.52■■□□□ 1.36
UBE3D-204ENST00000430071 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
UBE3D-204ENST00000430071 KCNQ2O43526 872 aa23.51■■□□□ 1.35
UBE3D-204ENST00000430071 NHSQ6T4R5 1651 aa23.5■■□□□ 1.35
UBE3D-204ENST00000430071 BCL9O00512 1426 aa23.5■■□□□ 1.35
UBE3D-204ENST00000430071 LRP5O75197 1615 aa23.49■■□□□ 1.35
UBE3D-204ENST00000430071 PARD3Q8TEW0 1356 aa23.49■■□□□ 1.35
UBE3D-204ENST00000430071 BTAF1O14981 1849 aa23.49■■□□□ 1.35
UBE3D-204ENST00000430071 C11orf95C9JLR9 678 aaPredicted RBP23.49■■□□□ 1.35
UBE3D-204ENST00000430071 BCL11BQ9C0K0 894 aaPredicted RBP23.49■■□□□ 1.35
UBE3D-204ENST00000430071 ACSBG1Q96GR2 724 aa23.48■■□□□ 1.35
UBE3D-204ENST00000430071 ANKRD26Q9UPS8 1709 aa23.47■■□□□ 1.35
UBE3D-204ENST00000430071 PROM2Q8N271 834 aa23.47■■□□□ 1.35
UBE3D-204ENST00000430071 HSP90AB2PQ58FF8 381 aa23.45■■□□□ 1.34
UBE3D-204ENST00000430071 NBPF6Q5VWK0 638 aa23.45■■□□□ 1.34
UBE3D-204ENST00000430071 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.34
UBE3D-204ENST00000430071 NBPF4Q96M43 638 aa23.45■■□□□ 1.34
UBE3D-204ENST00000430071 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
UBE3D-204ENST00000430071 PLSCR1O15162 318 aa23.44■■□□□ 1.34
UBE3D-204ENST00000430071 RTL1A6NKG5 1358 aa23.44■■□□□ 1.34
UBE3D-204ENST00000430071 MEGF6O75095 1541 aa23.44■■□□□ 1.34
UBE3D-204ENST00000430071 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
UBE3D-204ENST00000430071 DDX54Q8TDD1 881 aaKnown RBP23.41■■□□□ 1.34
UBE3D-204ENST00000430071 ANO8Q9HCE9 1232 aaPredicted RBP23.41■■□□□ 1.34
UBE3D-204ENST00000430071 PANK3Q9H999 370 aa23.4■■□□□ 1.34
UBE3D-204ENST00000430071 INSRP06213 1382 aa23.39■■□□□ 1.33
UBE3D-204ENST00000430071 FLT4P35916 1363 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms