RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
NUP98-207ENST00000429801 AATKQ6ZMQ8 1374 aa11.42□□□□□ -0.58
NUP98-207ENST00000429801 MTHFSP49914 203 aa11.42□□□□□ -0.58
NUP98-207ENST00000429801 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
NUP98-207ENST00000429801 CFAP53Q96M91 514 aa11.42□□□□□ -0.58
NUP98-207ENST00000429801 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
NUP98-207ENST00000429801 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
NUP98-207ENST00000429801 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
NUP98-207ENST00000429801 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
NUP98-207ENST00000429801 TRPM3Q9HCF6 1732 aaPredicted RBP11.4□□□□□ -0.58
NUP98-207ENST00000429801 TOM1O60784 492 aa11.4□□□□□ -0.58
NUP98-207ENST00000429801 USP54Q70EL1 1684 aa11.4□□□□□ -0.58
NUP98-207ENST00000429801 RRP9O43818 475 aaKnown RBP11.4□□□□□ -0.59
NUP98-207ENST00000429801 DDX17Q92841 729 aaKnown RBP11.4□□□□□ -0.59
NUP98-207ENST00000429801 IQSEC2Q5JU85 1478 aa11.4□□□□□ -0.59
NUP98-207ENST00000429801 PXDNQ92626 1479 aa11.39□□□□□ -0.59
NUP98-207ENST00000429801 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
NUP98-207ENST00000429801 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
NUP98-207ENST00000429801 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
NUP98-207ENST00000429801 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
NUP98-207ENST00000429801 SOS2Q07890 1332 aaPredicted RBP11.38□□□□□ -0.59
NUP98-207ENST00000429801 WDR43Q15061 677 aaKnown RBP eCLIP11.38□□□□□ -0.59
NUP98-207ENST00000429801 KCNH5Q8NCM2 988 aa11.38□□□□□ -0.59
NUP98-207ENST00000429801 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
NUP98-207ENST00000429801 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
NUP98-207ENST00000429801 SMG6Q86US8 1419 aaKnown RBP11.38□□□□□ -0.59
NUP98-207ENST00000429801 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 NEFMP07197 916 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 FBLN1P23142 703 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 IPO4Q8TEX9 1081 aaKnown RBP11.37□□□□□ -0.59
NUP98-207ENST00000429801 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 PNPLA6Q8IY17 1366 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 NHSL1Q5SYE7 1610 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
NUP98-207ENST00000429801 MAP2P11137 1827 aaKnown RBP11.37□□□□□ -0.59
NUP98-207ENST00000429801 ALS2Q96Q42 1657 aa11.37□□□□□ -0.59
NUP98-207ENST00000429801 INSRP06213 1382 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 ROBO1Q9Y6N7 1651 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 SOX12O15370 315 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
NUP98-207ENST00000429801 MARF1Q9Y4F3 1742 aaKnown RBP11.36□□□□□ -0.59
NUP98-207ENST00000429801 CERKQ8TCT0 537 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 USP19O94966 1318 aa11.36□□□□□ -0.59
NUP98-207ENST00000429801 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
NUP98-207ENST00000429801 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
NUP98-207ENST00000429801 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
NUP98-207ENST00000429801 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
NUP98-207ENST00000429801 SLIT3O75094 1523 aa11.34□□□□□ -0.59
NUP98-207ENST00000429801 GCP02774 474 aa11.34□□□□□ -0.59
NUP98-207ENST00000429801 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
NUP98-207ENST00000429801 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
NUP98-207ENST00000429801 AMPHP49418 695 aa11.34□□□□□ -0.59
NUP98-207ENST00000429801 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
NUP98-207ENST00000429801 AHDC1Q5TGY3 1603 aaPredicted RBP11.34□□□□□ -0.59
NUP98-207ENST00000429801 FLT4P35916 1363 aa11.33□□□□□ -0.6
NUP98-207ENST00000429801 LRRC59Q96AG4 307 aaKnown RBP11.33□□□□□ -0.6
NUP98-207ENST00000429801 NFAT5O94916 1531 aa11.33□□□□□ -0.6
NUP98-207ENST00000429801 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
NUP98-207ENST00000429801 RTL1A6NKG5 1358 aa11.32□□□□□ -0.6
NUP98-207ENST00000429801 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
NUP98-207ENST00000429801 SHPRHQ149N8 1683 aa11.32□□□□□ -0.6
NUP98-207ENST00000429801 MED1Q15648 1581 aaPredicted RBP11.31□□□□□ -0.6
NUP98-207ENST00000429801 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
NUP98-207ENST00000429801 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
NUP98-207ENST00000429801 HOXC9P31274 260 aa11.31□□□□□ -0.6
NUP98-207ENST00000429801 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP98-207ENST00000429801 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
NUP98-207ENST00000429801 BLMP54132 1417 aaPredicted RBP11.3□□□□□ -0.6
NUP98-207ENST00000429801 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
NUP98-207ENST00000429801 IL13P35225 146 aa11.3□□□□□ -0.6
NUP98-207ENST00000429801 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
NUP98-207ENST00000429801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
NUP98-207ENST00000429801 ARHGEF25Q86VW2 580 aa11.3□□□□□ -0.6
NUP98-207ENST00000429801 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
NUP98-207ENST00000429801 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
NUP98-207ENST00000429801 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
NUP98-207ENST00000429801 IP6K1Q92551 441 aa11.3□□□□□ -0.6
NUP98-207ENST00000429801 PHRF1Q9P1Y6 1649 aaKnown RBP11.29□□□□□ -0.6
NUP98-207ENST00000429801 LTN1O94822 1766 aa11.29□□□□□ -0.6
NUP98-207ENST00000429801 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
NUP98-207ENST00000429801 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
NUP98-207ENST00000429801 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
NUP98-207ENST00000429801 PHLPP1O60346 1717 aa11.28□□□□□ -0.6
NUP98-207ENST00000429801 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
NUP98-207ENST00000429801 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
NUP98-207ENST00000429801 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
NUP98-207ENST00000429801 CRYBG1Q9Y4K1 1723 aa11.28□□□□□ -0.6
NUP98-207ENST00000429801 FCHSD2O94868 740 aa11.27□□□□□ -0.61
NUP98-207ENST00000429801 RUNDC1Q96C34 613 aa11.27□□□□□ -0.61
NUP98-207ENST00000429801 CPDO75976 1380 aa11.27□□□□□ -0.61
NUP98-207ENST00000429801 CCDC146Q8IYE0 955 aa11.27□□□□□ -0.61
NUP98-207ENST00000429801 COL16A1Q07092 1604 aaPredicted RBP11.26□□□□□ -0.61
NUP98-207ENST00000429801 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
NUP98-207ENST00000429801 ABCC6O95255 1503 aa11.26□□□□□ -0.61
NUP98-207ENST00000429801 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
NUP98-207ENST00000429801 COL22A1Q8NFW1 1626 aaPredicted RBP11.25□□□□□ -0.61
NUP98-207ENST00000429801 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
NUP98-207ENST00000429801 IPO9Q96P70 1041 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms