RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 C9orf84Q5VXU9 1444 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 IPO7O95373 1038 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 REREQ9P2R6 1566 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 MCTP1Q6DN14 999 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 POTEDQ86YR6 584 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 MYRIPQ8NFW9 859 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 IFT57Q9NWB7 429 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 SOX12O15370 315 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 GSDMDP57764 484 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 RUFY1Q96T51 708 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 NOL8Q76FK4 1167 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 DYDC1Q8WWB3 177 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 SH2D4BQ5SQS7 431 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 GGT6Q6P531 493 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 TMCO3Q6UWJ1 677 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 UHRF1BP1LA0JNW5 1464 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 KIF3CO14782 793 aa8.93□□□□□ -0.98
SYNPO2-202ENST00000429713 SLMAPQ14BN4 828 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 RAPGEF6Q8TEU7 1601 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 EVC2Q86UK5 1308 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 TRAK1Q9UPV9 953 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 RPRD2Q5VT52 1461 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 KIF3BO15066 747 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 SLC4A10Q6U841 1118 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 GRIN2BQ13224 1484 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 TCHHQ07283 1943 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 BECN2A8MW95 431 aa8.92□□□□□ -0.98
SYNPO2-202ENST00000429713 ERBINQ96RT1 1412 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 GNL2Q13823 731 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 ATP6V1AP38606 617 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 ERC1Q8IUD2 1116 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 JPH4Q96JJ6 628 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 NKTRP30414 1462 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 EZRP15311 586 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 NEXNQ0ZGT2 675 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 YEATS2Q9ULM3 1422 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 RNF123Q5XPI4 1314 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 KDM5AP29375 1690 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 NBPF8Q3BBV2 869 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 SHTN1A0MZ66 631 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 TUBB2AQ13885 445 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 FOXD4L6Q3SYB3 417 aaPredicted RBP8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 FOXD4L3Q6VB84 417 aaPredicted RBP8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 TUBB2BQ9BVA1 445 aa8.91□□□□□ -0.98
SYNPO2-202ENST00000429713 PIP4K2AP48426 406 aaPredicted RBP8.9□□□□□ -0.98
SYNPO2-202ENST00000429713 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.98
SYNPO2-202ENST00000429713 UGGT2Q9NYU1 1516 aa8.9□□□□□ -0.98
SYNPO2-202ENST00000429713 SMTNL1A8MU46 457 aa8.9□□□□□ -0.98
SYNPO2-202ENST00000429713 ZNF397Q8NF99 534 aaPredicted RBP8.9□□□□□ -0.98
SYNPO2-202ENST00000429713 RILPL2Q969X0 211 aa8.9□□□□□ -0.98
SYNPO2-202ENST00000429713 CYB5RLQ6IPT4 315 aa8.9□□□□□ -0.99
SYNPO2-202ENST00000429713 WDR33Q9C0J8 1336 aaKnown RBP8.9□□□□□ -0.99
SYNPO2-202ENST00000429713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.9□□□□□ -0.99
SYNPO2-202ENST00000429713 ATP8B1O43520 1251 aa8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 TSR1Q2NL82 804 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 RBBP5Q15291 538 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 FAM135AQ9P2D6 1515 aa8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 NF2P35240 595 aa8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 TTC31Q49AM3 519 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 INTS3Q68E01 1043 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 NOC3LQ8WTT2 800 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 UBXN4Q92575 508 aa8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 DNMT1P26358 1616 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 SNX21Q969T3 373 aa8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 LNPKQ9C0E8 428 aa8.89□□□□□ -0.99
SYNPO2-202ENST00000429713 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 ABCA10Q8WWZ4 1543 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 ARHGEF12Q9NZN5 1544 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 RRP12Q5JTH9 1297 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 NOL10Q9BSC4 688 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 MYH10P35580 1976 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 FSD2A1L4K1 749 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 ITGB1BP2Q9UKP3 347 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 EIF5P55010 431 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 RAD50Q92878 1312 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 PPP2R1AP30153 589 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 ZSCAN12O43309 604 aa8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 NBPF7P0C2Y1 421 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-202ENST00000429713 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
SYNPO2-202ENST00000429713 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
SYNPO2-202ENST00000429713 RIPK4P57078 832 aa8.87□□□□□ -0.99
SYNPO2-202ENST00000429713 CT47A1Q5JQC4 288 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-202ENST00000429713 ZHX1Q9UKY1 873 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-202ENST00000429713 ANKRD30BQ9BXX2 1392 aa8.87□□□□□ -0.99
SYNPO2-202ENST00000429713 BCAR3O75815 825 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 SNAPC4Q5SXM2 1469 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 B4GALNT4Q76KP1 1039 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 BANK1Q8NDB2 785 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 CTCFLQ8NI51 663 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 HOMER1Q86YM7 354 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 CBFA2T2O43439 604 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 CDC45O75419 566 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 FAM210AQ96ND0 272 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms