RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 BCL11AQ9H165 835 aa11.37□□□□□ -0.59
GABPB1-205ENST00000429662 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-205ENST00000429662 USP32Q8NFA0 1604 aa11.36□□□□□ -0.59
GABPB1-205ENST00000429662 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
GABPB1-205ENST00000429662 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
GABPB1-205ENST00000429662 ADAMTS8Q9UP79 889 aa11.36□□□□□ -0.59
GABPB1-205ENST00000429662 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
GABPB1-205ENST00000429662 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
GABPB1-205ENST00000429662 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
GABPB1-205ENST00000429662 ZNF521Q96K83 1311 aa11.35□□□□□ -0.59
GABPB1-205ENST00000429662 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
GABPB1-205ENST00000429662 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
GABPB1-205ENST00000429662 SALL2Q9Y467 1007 aaPredicted RBP11.35□□□□□ -0.59
GABPB1-205ENST00000429662 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 SBNO2Q9Y2G9 1366 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 CENPQQ7L2Z9 268 aaPredicted RBP11.34□□□□□ -0.59
GABPB1-205ENST00000429662 ORAI2Q96SN7 254 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 RREB1Q92766 1687 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 CLTCL1P53675 1640 aa11.34□□□□□ -0.59
GABPB1-205ENST00000429662 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.33□□□□□ -0.6
GABPB1-205ENST00000429662 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
GABPB1-205ENST00000429662 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
GABPB1-205ENST00000429662 DISP2A7MBM2 1401 aa11.32□□□□□ -0.6
GABPB1-205ENST00000429662 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
GABPB1-205ENST00000429662 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
GABPB1-205ENST00000429662 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
GABPB1-205ENST00000429662 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
GABPB1-205ENST00000429662 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
GABPB1-205ENST00000429662 SLFN5Q08AF3 891 aa11.31□□□□□ -0.6
GABPB1-205ENST00000429662 IFFO2Q5TF58 517 aa11.31□□□□□ -0.6
GABPB1-205ENST00000429662 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
GABPB1-205ENST00000429662 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
GABPB1-205ENST00000429662 NUP188Q5SRE5 1749 aa11.31□□□□□ -0.6
GABPB1-205ENST00000429662 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
GABPB1-205ENST00000429662 E9PSI1 815 aa11.3□□□□□ -0.6
GABPB1-205ENST00000429662 YY1P25490 414 aa11.3□□□□□ -0.6
GABPB1-205ENST00000429662 NRXN1Q9ULB1 1477 aa11.3□□□□□ -0.6
GABPB1-205ENST00000429662 ROBO2Q9HCK4 1378 aa11.3□□□□□ -0.6
GABPB1-205ENST00000429662 KDM2BQ8NHM5 1336 aa11.3□□□□□ -0.6
GABPB1-205ENST00000429662 AAMPQ13685 434 aa11.29□□□□□ -0.6
GABPB1-205ENST00000429662 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
GABPB1-205ENST00000429662 THSD7AQ9UPZ6 1657 aa11.29□□□□□ -0.6
GABPB1-205ENST00000429662 PLEKHH1Q9ULM0 1364 aa11.29□□□□□ -0.6
GABPB1-205ENST00000429662 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
GABPB1-205ENST00000429662 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
GABPB1-205ENST00000429662 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
GABPB1-205ENST00000429662 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
GABPB1-205ENST00000429662 METRNQ9UJH8 293 aa11.28□□□□□ -0.6
GABPB1-205ENST00000429662 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-205ENST00000429662 UNC5CLQ8IV45 518 aa11.28□□□□□ -0.6
GABPB1-205ENST00000429662 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
GABPB1-205ENST00000429662 GOLGB1Q14789 3259 aaKnown RBP11.27□□□□□ -0.61
GABPB1-205ENST00000429662 PLIN1O60240 522 aa11.27□□□□□ -0.61
GABPB1-205ENST00000429662 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
GABPB1-205ENST00000429662 MYOM1P52179 1685 aa11.27□□□□□ -0.61
GABPB1-205ENST00000429662 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
GABPB1-205ENST00000429662 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
GABPB1-205ENST00000429662 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
GABPB1-205ENST00000429662 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
GABPB1-205ENST00000429662 NBR1Q14596 966 aa11.25□□□□□ -0.61
GABPB1-205ENST00000429662 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
GABPB1-205ENST00000429662 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
GABPB1-205ENST00000429662 KIF1BO60333 1816 aa11.25□□□□□ -0.61
GABPB1-205ENST00000429662 CGNL1Q0VF96 1302 aa11.24□□□□□ -0.61
GABPB1-205ENST00000429662 CENPJQ9HC77 1338 aaPredicted RBP11.24□□□□□ -0.61
GABPB1-205ENST00000429662 CRYBG1Q9Y4K1 1723 aa11.24□□□□□ -0.61
GABPB1-205ENST00000429662 C7P10643 843 aa11.24□□□□□ -0.61
GABPB1-205ENST00000429662 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
GABPB1-205ENST00000429662 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
GABPB1-205ENST00000429662 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
GABPB1-205ENST00000429662 TRPC6Q9Y210 931 aa11.24□□□□□ -0.61
GABPB1-205ENST00000429662 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
GABPB1-205ENST00000429662 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
GABPB1-205ENST00000429662 VPS72Q15906 364 aa11.23□□□□□ -0.61
GABPB1-205ENST00000429662 IFT172Q9UG01 1749 aa11.23□□□□□ -0.61
GABPB1-205ENST00000429662 ADGRF5Q8IZF2 1346 aa11.22□□□□□ -0.61
GABPB1-205ENST00000429662 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-205ENST00000429662 CASZ1Q86V15 1759 aa11.22□□□□□ -0.61
GABPB1-205ENST00000429662 KRT27Q7Z3Y8 459 aa11.22□□□□□ -0.61
GABPB1-205ENST00000429662 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
GABPB1-205ENST00000429662 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-205ENST00000429662 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
GABPB1-205ENST00000429662 NSD2O96028 1365 aa11.21□□□□□ -0.61
GABPB1-205ENST00000429662 APAF1O14727 1248 aa11.21□□□□□ -0.61
GABPB1-205ENST00000429662 MAP3K13O43283 966 aa11.21□□□□□ -0.61
GABPB1-205ENST00000429662 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
GABPB1-205ENST00000429662 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
GABPB1-205ENST00000429662 BAG6P46379 1132 aa11.21□□□□□ -0.61
GABPB1-205ENST00000429662 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.61
GABPB1-205ENST00000429662 C20orf194Q5TEA3 1177 aa11.21□□□□□ -0.61
GABPB1-205ENST00000429662 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.62
GABPB1-205ENST00000429662 CCDC27Q2M243 656 aa11.2□□□□□ -0.62
GABPB1-205ENST00000429662 WDR63Q8IWG1 891 aa11.2□□□□□ -0.62
GABPB1-205ENST00000429662 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
GABPB1-205ENST00000429662 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
GABPB1-205ENST00000429662 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
GABPB1-205ENST00000429662 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
GABPB1-205ENST00000429662 SF3B2Q13435 895 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms