RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
LDB3-205ENST00000429277 AFAP1Q8N556 730 aa15.18■□□□□ 0.02
LDB3-205ENST00000429277 KRT32Q14532 448 aa15.18■□□□□ 0.02
LDB3-205ENST00000429277 ZSCAN31Q96LW9 406 aaPredicted RBP15.18■□□□□ 0.02
LDB3-205ENST00000429277 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.02
LDB3-205ENST00000429277 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
LDB3-205ENST00000429277 POGZQ7Z3K3 1410 aa15.18■□□□□ 0.02
LDB3-205ENST00000429277 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
LDB3-205ENST00000429277 TMEM132AQ24JP5 1023 aa15.17■□□□□ 0.02
LDB3-205ENST00000429277 ZNF530Q6P9A1 599 aaPredicted RBP15.17■□□□□ 0.02
LDB3-205ENST00000429277 KRT85P78386 507 aa15.17■□□□□ 0.02
LDB3-205ENST00000429277 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
LDB3-205ENST00000429277 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
LDB3-205ENST00000429277 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
LDB3-205ENST00000429277 CAVIN1Q6NZI2 390 aaKnown RBP15.16■□□□□ 0.02
LDB3-205ENST00000429277 PRG4Q92954 1404 aaPredicted RBP15.16■□□□□ 0.02
LDB3-205ENST00000429277 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
LDB3-205ENST00000429277 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
LDB3-205ENST00000429277 CDK19Q9BWU1 502 aa15.16■□□□□ 0.02
LDB3-205ENST00000429277 NOB1Q9ULX3 412 aaKnown RBP15.16■□□□□ 0.02
LDB3-205ENST00000429277 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
LDB3-205ENST00000429277 CCDC57Q2TAC2 916 aa15.16■□□□□ 0.02
LDB3-205ENST00000429277 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
LDB3-205ENST00000429277 CIZ1Q9ULV3 898 aaPredicted RBP15.15■□□□□ 0.02
LDB3-205ENST00000429277 ZRSR2Q15696 482 aaKnown RBP15.15■□□□□ 0.02
LDB3-205ENST00000429277 WASF1Q92558 559 aa15.15■□□□□ 0.02
LDB3-205ENST00000429277 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
LDB3-205ENST00000429277 RPAP2Q8IXW5 612 aaPredicted RBP15.15■□□□□ 0.02
LDB3-205ENST00000429277 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
LDB3-205ENST00000429277 DAPK1P53355 1430 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 FCHSD2O94868 740 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 ATP2B1P20020 1258 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 PPFIBP1Q86W92 1011 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 MTMR7Q9Y216 660 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 PRPF40AO75400 957 aaKnown RBP15.14■□□□□ 0.01
LDB3-205ENST00000429277 TOM1L2Q6ZVM7 507 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
LDB3-205ENST00000429277 BMP2KQ9NSY1 1161 aaPredicted RBP15.14■□□□□ 0.01
LDB3-205ENST00000429277 SF3B2Q13435 895 aaKnown RBP15.13■□□□□ 0.01
LDB3-205ENST00000429277 MVPQ14764 893 aaKnown RBP15.13■□□□□ 0.01
LDB3-205ENST00000429277 VSIG10Q8N0Z9 540 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 FIBPO43427 364 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 RNF214Q8ND24 703 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 K7ELQ4 463 aaPredicted RBP15.13■□□□□ 0.01
LDB3-205ENST00000429277 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 BLOC1S2Q6QNY1 142 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 CEP126Q9P2H0 1117 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
LDB3-205ENST00000429277 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
LDB3-205ENST00000429277 ERBINQ96RT1 1412 aa15.12■□□□□ 0.01
LDB3-205ENST00000429277 SERPINC1P01008 464 aa15.12■□□□□ 0.01
LDB3-205ENST00000429277 STRN4Q9NRL3 753 aa15.12■□□□□ 0.01
LDB3-205ENST00000429277 CABP1Q9NZU7 370 aa15.12■□□□□ 0.01
LDB3-205ENST00000429277 TNMDQ9H2S6 317 aa15.11■□□□□ 0.01
LDB3-205ENST00000429277 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
LDB3-205ENST00000429277 FAM177BA6PVY3 158 aa15.11■□□□□ 0.01
LDB3-205ENST00000429277 H0YHG0 523 aa15.11■□□□□ 0.01
LDB3-205ENST00000429277 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
LDB3-205ENST00000429277 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
LDB3-205ENST00000429277 IQCEQ6IPM2 695 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 GOLGA6L10A6NI86 522 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 CFTRP13569 1480 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 ME1P48163 572 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 SLC12A5Q9H2X9 1139 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 DESP17661 470 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 ERLIN1O75477 346 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 LARP1BQ659C4 914 aaKnown RBP15.1■□□□□ 0.01
LDB3-205ENST00000429277 CHD1LQ86WJ1 897 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 UBAC1Q9BSL1 405 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 DEF6Q9H4E7 631 aa15.1■□□□□ 0.01
LDB3-205ENST00000429277 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
LDB3-205ENST00000429277 PAF1Q8N7H5 531 aa15.09■□□□□ 0.01
LDB3-205ENST00000429277 CEP57L1Q8IYX8 460 aa15.08■□□□□ 0.01
LDB3-205ENST00000429277 CEP131Q9UPN4 1083 aa15.08■□□□□ 0.01
LDB3-205ENST00000429277 PRDM11Q9NQV5 511 aa15.08■□□□□ 0
LDB3-205ENST00000429277 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
LDB3-205ENST00000429277 TTLL5Q6EMB2 1281 aa15.08■□□□□ 0
LDB3-205ENST00000429277 LEKR1Q6ZMV7 388 aa15.08■□□□□ 0
LDB3-205ENST00000429277 AACSQ86V21 672 aa15.08■□□□□ 0
LDB3-205ENST00000429277 TSR2Q969E8 191 aaKnown RBP15.08■□□□□ 0
LDB3-205ENST00000429277 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
LDB3-205ENST00000429277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 0
LDB3-205ENST00000429277 SRGAP3O43295 1099 aa15.07■□□□□ 0
LDB3-205ENST00000429277 CCDC181Q5TID7 509 aa15.07■□□□□ 0
LDB3-205ENST00000429277 C1orf115Q9H7X2 142 aa15.07■□□□□ 0
LDB3-205ENST00000429277 SMTNL1A8MU46 457 aa15.07■□□□□ 0
LDB3-205ENST00000429277 IGHMBP2P38935 993 aaKnown RBP15.07■□□□□ 0
LDB3-205ENST00000429277 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
LDB3-205ENST00000429277 PDRG1Q9NUG6 133 aa15.07■□□□□ 0
LDB3-205ENST00000429277 NFE2L2Q16236 605 aa15.07■□□□□ 0
LDB3-205ENST00000429277 ABCC11Q96J66 1382 aa15.07■□□□□ 0
LDB3-205ENST00000429277 BTBD11A6QL63 1104 aa15.07■□□□□ 0
LDB3-205ENST00000429277 AKAP2Q9Y2D5 859 aa15.07■□□□□ 0
LDB3-205ENST00000429277 RAB11FIP3O75154 756 aa15.06■□□□□ 0
LDB3-205ENST00000429277 EIF3JO75822 258 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms