RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 C11orf95C9JLR9 678 aaPredicted RBP7.3□□□□□ -1.24
CCDC144A-208ENST00000428950 SOCS7O14512 581 aa7.3□□□□□ -1.24
CCDC144A-208ENST00000428950 BMP1P13497 986 aa7.3□□□□□ -1.24
CCDC144A-208ENST00000428950 ADAM32Q8TC27 787 aa7.3□□□□□ -1.24
CCDC144A-208ENST00000428950 SENP2Q9HC62 589 aa7.3□□□□□ -1.24
CCDC144A-208ENST00000428950 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
CCDC144A-208ENST00000428950 TRIM46Q7Z4K8 759 aa7.29□□□□□ -1.24
CCDC144A-208ENST00000428950 MTMR14Q8NCE2 650 aa7.29□□□□□ -1.24
CCDC144A-208ENST00000428950 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
CCDC144A-208ENST00000428950 ZIC2O95409 532 aaPredicted RBP7.28□□□□□ -1.24
CCDC144A-208ENST00000428950 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
CCDC144A-208ENST00000428950 CCDC116Q8IYX3 515 aa7.28□□□□□ -1.24
CCDC144A-208ENST00000428950 KIFC2Q96AC6 838 aa7.28□□□□□ -1.24
CCDC144A-208ENST00000428950 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
CCDC144A-208ENST00000428950 APBB1O00213 710 aa7.27□□□□□ -1.25
CCDC144A-208ENST00000428950 SNRPBP14678 240 aaKnown RBP7.27□□□□□ -1.25
CCDC144A-208ENST00000428950 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
CCDC144A-208ENST00000428950 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
CCDC144A-208ENST00000428950 SNRKQ9NRH2 765 aa7.27□□□□□ -1.25
CCDC144A-208ENST00000428950 MRPL14Q6P1L8 145 aaKnown RBP7.26□□□□□ -1.25
CCDC144A-208ENST00000428950 EMILIN1Q9Y6C2 1016 aa7.26□□□□□ -1.25
CCDC144A-208ENST00000428950 NDUFB9Q9Y6M9 179 aa7.26□□□□□ -1.25
CCDC144A-208ENST00000428950 ZBBXA8MT70 800 aa7.25□□□□□ -1.25
CCDC144A-208ENST00000428950 GPR37L1O60883 481 aa7.25□□□□□ -1.25
CCDC144A-208ENST00000428950 NBPF20Q3BBV1 942 aa7.25□□□□□ -1.25
CCDC144A-208ENST00000428950 FBXO45P0C2W1 286 aa7.24□□□□□ -1.25
CCDC144A-208ENST00000428950 INTS6LQ5JSJ4 861 aaKnown RBP7.24□□□□□ -1.25
CCDC144A-208ENST00000428950 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
CCDC144A-208ENST00000428950 DZIP3Q86Y13 1208 aaKnown RBP7.24□□□□□ -1.25
CCDC144A-208ENST00000428950 MEIOBQ8N635 442 aa7.24□□□□□ -1.25
CCDC144A-208ENST00000428950 DHX9Q08211 1270 aaKnown RBP7.23□□□□□ -1.25
CCDC144A-208ENST00000428950 SCARF1Q14162 830 aa7.23□□□□□ -1.25
CCDC144A-208ENST00000428950 ZFP42Q96MM3 310 aa7.23□□□□□ -1.25
CCDC144A-208ENST00000428950 PGPEP1Q9NXJ5 209 aa7.23□□□□□ -1.25
CCDC144A-208ENST00000428950 NR1H3Q13133 447 aa7.22□□□□□ -1.25
CCDC144A-208ENST00000428950 PURBQ96QR8 312 aaKnown RBP7.22□□□□□ -1.25
CCDC144A-208ENST00000428950 ESPNB1AK53 854 aa7.21□□□□□ -1.26
CCDC144A-208ENST00000428950 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.26
CCDC144A-208ENST00000428950 PCDHB9Q9Y5E1 797 aa7.21□□□□□ -1.26
CCDC144A-208ENST00000428950 UPP2O95045 317 aa7.2□□□□□ -1.26
CCDC144A-208ENST00000428950 RAB15P59190 212 aa7.2□□□□□ -1.26
CCDC144A-208ENST00000428950 CBLBQ13191 982 aa7.19□□□□□ -1.26
CCDC144A-208ENST00000428950 C6orf118Q5T5N4 469 aa7.19□□□□□ -1.26
CCDC144A-208ENST00000428950 Q6ZVU0 165 aa7.19□□□□□ -1.26
CCDC144A-208ENST00000428950 TBC1D2BQ9UPU7 963 aa7.19□□□□□ -1.26
CCDC144A-208ENST00000428950 TERTO14746 1132 aaKnown RBP7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 BMP2P12643 396 aa7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 MCM6Q14566 821 aa7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 SEPT12Q8IYM1 358 aa7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 TSEN34Q9BSV6 310 aaKnown RBP7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 PRM3Q9NNZ6 103 aa7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 ZNF330Q9Y3S2 320 aaPredicted RBP7.18□□□□□ -1.26
CCDC144A-208ENST00000428950 ERVH48-1M5A8F1 160 aa7.17□□□□□ -1.26
CCDC144A-208ENST00000428950 MCCD1P59942 119 aaPredicted RBP7.17□□□□□ -1.26
CCDC144A-208ENST00000428950 ZNF784Q8NCA9 323 aaPredicted RBP7.17□□□□□ -1.26
CCDC144A-208ENST00000428950 TMPRSS4Q9NRS4 437 aa7.17□□□□□ -1.26
CCDC144A-208ENST00000428950 GIGYF1O75420 1035 aaPredicted RBP7.16□□□□□ -1.26
CCDC144A-208ENST00000428950 SOBPA7XYQ1 873 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 MAN1A2O60476 641 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 LILRA1O75019 489 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 SOS2Q07890 1332 aaPredicted RBP7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 IRF5Q13568 498 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 CCDC125Q86Z20 511 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 ZSCAN1Q8NBB4 408 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 AGBL1Q96MI9 1066 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 GDPD2Q9HCC8 539 aa7.14□□□□□ -1.27
CCDC144A-208ENST00000428950 SPINT1O43278 529 aa7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 ADH1AP07327 375 aa7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 RNF20Q5VTR2 975 aa7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 CYLDQ9NQC7 956 aa7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 NXF1Q9UBU9 619 aaKnown RBP7.13□□□□□ -1.27
CCDC144A-208ENST00000428950 TTLL8A6PVC2 850 aa7.12□□□□□ -1.27
CCDC144A-208ENST00000428950 ADD1P35611 737 aaKnown RBP7.12□□□□□ -1.27
CCDC144A-208ENST00000428950 ABL2P42684 1182 aa7.12□□□□□ -1.27
CCDC144A-208ENST00000428950 RELBQ01201 579 aa7.12□□□□□ -1.27
CCDC144A-208ENST00000428950 DNMT3LQ9UJW3 386 aa7.12□□□□□ -1.27
CCDC144A-208ENST00000428950 TMEM132AQ24JP5 1023 aa7.11□□□□□ -1.27
CCDC144A-208ENST00000428950 NPAS3Q8IXF0 933 aa7.11□□□□□ -1.27
CCDC144A-208ENST00000428950 ERVK-9P63128 1117 aa7.1□□□□□ -1.27
CCDC144A-208ENST00000428950 EIF4G2P78344 907 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCDC144A-208ENST00000428950 SLC16A10Q8TF71 515 aa7.1□□□□□ -1.27
CCDC144A-208ENST00000428950 PCDHB11Q9Y5F2 797 aa7.1□□□□□ -1.27
CCDC144A-208ENST00000428950 H3BM21 787 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 PTGIRP43119 386 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 VEGFBP49765 207 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 WASHC4Q2M389 1173 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 CC2D2BQ6DHV5 1058 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 KCTD17Q8N5Z5 321 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 KDF1Q8NAX2 398 aaPredicted RBP7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 INSM2Q96T92 566 aaPredicted RBP7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 ZNF395Q9H8N7 513 aaPredicted RBP7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 CEP126Q9P2H0 1117 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 COG6Q9Y2V7 657 aa7.09□□□□□ -1.27
CCDC144A-208ENST00000428950 CTSOP43234 321 aaPredicted RBP7.08□□□□□ -1.28
CCDC144A-208ENST00000428950 FLIIQ13045 1269 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms