RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 TESK2Q96S53 571 aa25.73■■□□□ 1.71
LRRC23-204ENST00000428946 AXIN2Q9Y2T1 843 aa25.73■■□□□ 1.71
LRRC23-204ENST00000428946 PSDA5PKW4 1024 aaPredicted RBP25.71■■□□□ 1.71
LRRC23-204ENST00000428946 THRAP3Q9Y2W1 955 aaKnown RBP25.71■■□□□ 1.71
LRRC23-204ENST00000428946 DISP2A7MBM2 1401 aa25.71■■□□□ 1.71
LRRC23-204ENST00000428946 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
LRRC23-204ENST00000428946 TOM1L2Q6ZVM7 507 aa25.7■■□□□ 1.7
LRRC23-204ENST00000428946 ARHGEF25Q86VW2 580 aa25.7■■□□□ 1.7
LRRC23-204ENST00000428946 KCNH5Q8NCM2 988 aa25.7■■□□□ 1.7
LRRC23-204ENST00000428946 SLC12A5Q9H2X9 1139 aa25.7■■□□□ 1.7
LRRC23-204ENST00000428946 NME9Q86XW9 330 aa25.69■■□□□ 1.7
LRRC23-204ENST00000428946 LTN1O94822 1766 aa25.69■■□□□ 1.7
LRRC23-204ENST00000428946 USP47Q96K76 1375 aa25.69■■□□□ 1.7
LRRC23-204ENST00000428946 EZH2Q15910 746 aaKnown RBP25.68■■□□□ 1.7
LRRC23-204ENST00000428946 WDR17Q8IZU2 1322 aa25.67■■□□□ 1.7
LRRC23-204ENST00000428946 A0A1W2PP64 1363 aa25.67■■□□□ 1.7
LRRC23-204ENST00000428946 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
LRRC23-204ENST00000428946 HDGFL2Q7Z4V5 671 aaPredicted RBP25.66■■□□□ 1.7
LRRC23-204ENST00000428946 APBA3O96018 575 aa25.64■■□□□ 1.7
LRRC23-204ENST00000428946 CSB-PGBD3P0DP91 1061 aa25.64■■□□□ 1.7
LRRC23-204ENST00000428946 USP31Q70CQ4 1352 aa25.64■■□□□ 1.69
LRRC23-204ENST00000428946 RREB1Q92766 1687 aa25.64■■□□□ 1.69
LRRC23-204ENST00000428946 EDC4Q6P2E9 1401 aaKnown RBP25.63■■□□□ 1.69
LRRC23-204ENST00000428946 PUS7Q96PZ0 661 aaKnown RBP25.63■■□□□ 1.69
LRRC23-204ENST00000428946 SBF2Q86WG5 1849 aa25.63■■□□□ 1.69
LRRC23-204ENST00000428946 SLC24A1O60721 1099 aa25.62■■□□□ 1.69
LRRC23-204ENST00000428946 NUP188Q5SRE5 1749 aa25.62■■□□□ 1.69
LRRC23-204ENST00000428946 LRP5O75197 1615 aa25.62■■□□□ 1.69
LRRC23-204ENST00000428946 CAMKK2Q96RR4 588 aa25.61■■□□□ 1.69
LRRC23-204ENST00000428946 ABCC6O95255 1503 aa25.61■■□□□ 1.69
LRRC23-204ENST00000428946 OVOS2A0A0G2JMS6 1433 aa25.61■■□□□ 1.69
LRRC23-204ENST00000428946 OVOS2A0A0J9YW53 1432 aa25.61■■□□□ 1.69
LRRC23-204ENST00000428946 OVOS2Q6IE36 1432 aa25.61■■□□□ 1.69
LRRC23-204ENST00000428946 DDB1Q16531 1140 aa25.6■■□□□ 1.69
LRRC23-204ENST00000428946 TERF2IPQ9NYB0 399 aa25.6■■□□□ 1.69
LRRC23-204ENST00000428946 R3HDM1Q15032 1099 aaKnown RBP25.59■■□□□ 1.69
LRRC23-204ENST00000428946 TMF1P82094 1093 aa25.58■■□□□ 1.69
LRRC23-204ENST00000428946 CARD10Q9BWT7 1032 aa25.57■■□□□ 1.68
LRRC23-204ENST00000428946 PARD3Q8TEW0 1356 aa25.55■■□□□ 1.68
LRRC23-204ENST00000428946 NINLQ9Y2I6 1382 aa25.54■■□□□ 1.68
LRRC23-204ENST00000428946 ERBB3P21860 1342 aa25.53■■□□□ 1.68
LRRC23-204ENST00000428946 MARCH10Q8NA82 808 aaPredicted RBP25.52■■□□□ 1.68
LRRC23-204ENST00000428946 CCDC7Q96M83 1385 aa25.52■■□□□ 1.68
LRRC23-204ENST00000428946 PTF1AQ7RTS3 328 aa25.51■■□□□ 1.67
LRRC23-204ENST00000428946 CDCA7Q9BWT1 371 aaPredicted RBP25.51■■□□□ 1.67
LRRC23-204ENST00000428946 NLRP2Q9NX02 1062 aa25.5■■□□□ 1.67
LRRC23-204ENST00000428946 RGPD3A6NKT7 1758 aaPredicted RBP25.49■■□□□ 1.67
LRRC23-204ENST00000428946 RGPD4Q7Z3J3 1758 aa25.49■■□□□ 1.67
LRRC23-204ENST00000428946 TNS2Q63HR2 1409 aa25.49■■□□□ 1.67
LRRC23-204ENST00000428946 ANKRD36BQ8N2N9 1353 aa25.48■■□□□ 1.67
LRRC23-204ENST00000428946 ANKRD24Q8TF21 1146 aa25.48■■□□□ 1.67
LRRC23-204ENST00000428946 C11orf95C9JLR9 678 aaPredicted RBP25.47■■□□□ 1.67
LRRC23-204ENST00000428946 HSPA5P11021 654 aaKnown RBP25.47■■□□□ 1.67
LRRC23-204ENST00000428946 EIF4G2P78344 907 aaKnown RBP eCLIP25.47■■□□□ 1.67
LRRC23-204ENST00000428946 CDCA8Q53HL2 280 aa25.47■■□□□ 1.67
LRRC23-204ENST00000428946 EXOC5O00471 708 aa25.45■■□□□ 1.66
LRRC23-204ENST00000428946 FBLN1P23142 703 aa25.45■■□□□ 1.66
LRRC23-204ENST00000428946 MYOM1P52179 1685 aa25.45■■□□□ 1.66
LRRC23-204ENST00000428946 KIF20BQ96Q89 1820 aa25.44■■□□□ 1.66
LRRC23-204ENST00000428946 LTV1Q96GA3 475 aaPredicted RBP25.44■■□□□ 1.66
LRRC23-204ENST00000428946 COG3Q96JB2 828 aa25.44■■□□□ 1.66
LRRC23-204ENST00000428946 FAM208AQ9UK61 1670 aaKnown RBP25.44■■□□□ 1.66
LRRC23-204ENST00000428946 RGPD2P0DJD1 1756 aa25.44■■□□□ 1.66
LRRC23-204ENST00000428946 BCL11BQ9C0K0 894 aaPredicted RBP25.43■■□□□ 1.66
LRRC23-204ENST00000428946 BCL9O00512 1426 aa25.42■■□□□ 1.66
LRRC23-204ENST00000428946 NHSQ6T4R5 1651 aa25.42■■□□□ 1.66
LRRC23-204ENST00000428946 MAP3K19Q56UN5 1328 aa25.41■■□□□ 1.66
LRRC23-204ENST00000428946 IP6K1Q92551 441 aa25.41■■□□□ 1.66
LRRC23-204ENST00000428946 IL2RBP14784 551 aa25.4■■□□□ 1.66
LRRC23-204ENST00000428946 NBPF14Q5TI25 921 aa25.4■■□□□ 1.66
LRRC23-204ENST00000428946 POLR3GLQ9BT43 218 aa25.39■■□□□ 1.66
LRRC23-204ENST00000428946 GGNBP2Q9H3C7 697 aa25.39■■□□□ 1.66
LRRC23-204ENST00000428946 KAT6BQ8WYB5 2073 aa25.38■■□□□ 1.65
LRRC23-204ENST00000428946 PLSCR1O15162 318 aa25.38■■□□□ 1.65
LRRC23-204ENST00000428946 ACSBG1Q96GR2 724 aa25.37■■□□□ 1.65
LRRC23-204ENST00000428946 KCNQ2O43526 872 aa25.36■■□□□ 1.65
LRRC23-204ENST00000428946 HOXC9P31274 260 aa25.36■■□□□ 1.65
LRRC23-204ENST00000428946 AMPHP49418 695 aa25.36■■□□□ 1.65
LRRC23-204ENST00000428946 RRS1Q15050 365 aaKnown RBP25.36■■□□□ 1.65
LRRC23-204ENST00000428946 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
LRRC23-204ENST00000428946 FYB1O15117 783 aa25.35■■□□□ 1.65
LRRC23-204ENST00000428946 BTAF1O14981 1849 aa25.35■■□□□ 1.65
LRRC23-204ENST00000428946 CARD14Q9BXL6 1004 aa25.34■■□□□ 1.65
LRRC23-204ENST00000428946 PROM2Q8N271 834 aa25.33■■□□□ 1.65
LRRC23-204ENST00000428946 SHANK3Q9BYB0 1731 aa25.32■■□□□ 1.64
LRRC23-204ENST00000428946 CASZ1Q86V15 1759 aa25.31■■□□□ 1.64
LRRC23-204ENST00000428946 NSD3Q9BZ95 1437 aa25.31■■□□□ 1.64
LRRC23-204ENST00000428946 RTL1A6NKG5 1358 aa25.3■■□□□ 1.64
LRRC23-204ENST00000428946 TXNRD1Q16881 649 aa25.29■■□□□ 1.64
LRRC23-204ENST00000428946 MEGF6O75095 1541 aa25.28■■□□□ 1.64
LRRC23-204ENST00000428946 DDX54Q8TDD1 881 aaKnown RBP25.28■■□□□ 1.64
LRRC23-204ENST00000428946 DOT1LQ8TEK3 1739 aa25.28■■□□□ 1.64
LRRC23-204ENST00000428946 PDGFDQ9GZP0 370 aaPredicted RBP25.26■■□□□ 1.63
LRRC23-204ENST00000428946 USHBP1Q8N6Y0 703 aa25.25■■□□□ 1.63
LRRC23-204ENST00000428946 SMG6Q86US8 1419 aaKnown RBP25.23■■□□□ 1.63
LRRC23-204ENST00000428946 PAPPAQ13219 1627 aa25.23■■□□□ 1.63
LRRC23-204ENST00000428946 NBPF6Q5VWK0 638 aa25.22■■□□□ 1.63
LRRC23-204ENST00000428946 NBPF4Q96M43 638 aa25.22■■□□□ 1.63
LRRC23-204ENST00000428946 SPON1Q9HCB6 807 aa25.22■■□□□ 1.63
LRRC23-204ENST00000428946 HSP90AB2PQ58FF8 381 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms