RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 DISP2A7MBM2 1401 aa38.49■■■■□ 3.75
LMO1-202ENST00000428101 USP31Q70CQ4 1352 aa38.48■■■■□ 3.75
LMO1-202ENST00000428101 TRIM37O94972 964 aa38.48■■■■□ 3.75
LMO1-202ENST00000428101 USP54Q70EL1 1684 aa38.47■■■■□ 3.75
LMO1-202ENST00000428101 HDGFL2Q7Z4V5 671 aaPredicted RBP38.47■■■■□ 3.75
LMO1-202ENST00000428101 TOM1L2Q6ZVM7 507 aa38.46■■■■□ 3.75
LMO1-202ENST00000428101 NME9Q86XW9 330 aa38.46■■■■□ 3.75
LMO1-202ENST00000428101 WDR17Q8IZU2 1322 aa38.45■■■■□ 3.75
LMO1-202ENST00000428101 A0A1W2PP64 1363 aa38.44■■■■□ 3.74
LMO1-202ENST00000428101 EDC4Q6P2E9 1401 aaKnown RBP38.42■■■■□ 3.74
LMO1-202ENST00000428101 TERF2IPQ9NYB0 399 aa38.42■■■■□ 3.74
LMO1-202ENST00000428101 EZH2Q15910 746 aaKnown RBP38.38■■■■□ 3.73
LMO1-202ENST00000428101 WNK3Q9BYP7 1800 aa38.38■■■■□ 3.73
LMO1-202ENST00000428101 ABCC6O95255 1503 aa38.38■■■■□ 3.73
LMO1-202ENST00000428101 CAMKK2Q96RR4 588 aa38.37■■■■□ 3.73
LMO1-202ENST00000428101 LRRC37A3O60309 1634 aa38.37■■■■□ 3.73
LMO1-202ENST00000428101 SLC24A1O60721 1099 aa38.36■■■■□ 3.73
LMO1-202ENST00000428101 APBA3O96018 575 aa38.35■■■■□ 3.73
LMO1-202ENST00000428101 CARD10Q9BWT7 1032 aa38.35■■■■□ 3.73
LMO1-202ENST00000428101 NINLQ9Y2I6 1382 aa38.34■■■■□ 3.73
LMO1-202ENST00000428101 CSB-PGBD3P0DP91 1061 aa38.34■■■■□ 3.73
LMO1-202ENST00000428101 PEAK1Q9H792 1746 aa38.33■■■■□ 3.73
LMO1-202ENST00000428101 PSDA5PKW4 1024 aaPredicted RBP38.33■■■■□ 3.73
LMO1-202ENST00000428101 DDB1Q16531 1140 aa38.33■■■■□ 3.73
LMO1-202ENST00000428101 USP47Q96K76 1375 aa38.32■■■■□ 3.73
LMO1-202ENST00000428101 LTN1O94822 1766 aa38.32■■■■□ 3.73
LMO1-202ENST00000428101 OVOS2A0A0J9YW53 1432 aa38.29■■■■□ 3.72
LMO1-202ENST00000428101 OVOS2Q6IE36 1432 aa38.29■■■■□ 3.72
LMO1-202ENST00000428101 CDCA7Q9BWT1 371 aaPredicted RBP38.29■■■■□ 3.72
LMO1-202ENST00000428101 OVOS2A0A0G2JMS6 1433 aa38.29■■■■□ 3.72
LMO1-202ENST00000428101 C11orf95C9JLR9 678 aaPredicted RBP38.28■■■■□ 3.72
LMO1-202ENST00000428101 PARD3Q8TEW0 1356 aa38.27■■■■□ 3.72
LMO1-202ENST00000428101 SBF2Q86WG5 1849 aa38.26■■■■□ 3.72
LMO1-202ENST00000428101 PCGF6Q9BYE7 350 aa38.26■■■■□ 3.72
LMO1-202ENST00000428101 TIMELESSQ9UNS1 1208 aa38.24■■■■□ 3.71
LMO1-202ENST00000428101 CCDC7Q96M83 1385 aa38.23■■■■□ 3.71
LMO1-202ENST00000428101 ERBB3P21860 1342 aa38.23■■■■□ 3.71
LMO1-202ENST00000428101 CLSPNQ9HAW4 1339 aa38.23■■■■□ 3.71
LMO1-202ENST00000428101 TMF1P82094 1093 aa38.23■■■■□ 3.71
LMO1-202ENST00000428101 MARCH10Q8NA82 808 aaPredicted RBP38.23■■■■□ 3.71
LMO1-202ENST00000428101 RREB1Q92766 1687 aa38.23■■■■□ 3.71
LMO1-202ENST00000428101 R3HDM1Q15032 1099 aaKnown RBP38.21■■■■□ 3.71
LMO1-202ENST00000428101 ANKRD36BQ8N2N9 1353 aa38.2■■■■□ 3.71
LMO1-202ENST00000428101 LRP5O75197 1615 aa38.2■■■■□ 3.7
LMO1-202ENST00000428101 NUP188Q5SRE5 1749 aa38.17■■■■□ 3.7
LMO1-202ENST00000428101 BCL9O00512 1426 aa38.16■■■■□ 3.7
LMO1-202ENST00000428101 ANKRD24Q8TF21 1146 aa38.16■■■■□ 3.7
LMO1-202ENST00000428101 NLRP2Q9NX02 1062 aa38.16■■■■□ 3.7
LMO1-202ENST00000428101 EXOC5O00471 708 aa38.15■■■■□ 3.7
LMO1-202ENST00000428101 PTF1AQ7RTS3 328 aa38.14■■■■□ 3.7
LMO1-202ENST00000428101 COG3Q96JB2 828 aa38.14■■■■□ 3.7
LMO1-202ENST00000428101 IP6K1Q92551 441 aa38.13■■■■□ 3.69
LMO1-202ENST00000428101 BCL11BQ9C0K0 894 aaPredicted RBP38.12■■■■□ 3.69
LMO1-202ENST00000428101 TNS2Q63HR2 1409 aa38.11■■■■□ 3.69
LMO1-202ENST00000428101 FBLN1P23142 703 aa38.09■■■■□ 3.69
LMO1-202ENST00000428101 PLSCR1O15162 318 aa38.08■■■■□ 3.69
LMO1-202ENST00000428101 CDCA8Q53HL2 280 aa38.08■■■■□ 3.69
LMO1-202ENST00000428101 RGPD3A6NKT7 1758 aaPredicted RBP38.08■■■■□ 3.69
LMO1-202ENST00000428101 RGPD4Q7Z3J3 1758 aa38.08■■■■□ 3.69
LMO1-202ENST00000428101 MAP3K19Q56UN5 1328 aa38.07■■■■□ 3.68
LMO1-202ENST00000428101 FYB1O15117 783 aa38.06■■■■□ 3.68
LMO1-202ENST00000428101 IL2RBP14784 551 aa38.06■■■■□ 3.68
LMO1-202ENST00000428101 NBPF14Q5TI25 921 aa38.03■■■■□ 3.68
LMO1-202ENST00000428101 HOXC9P31274 260 aa38.02■■■■□ 3.68
LMO1-202ENST00000428101 LTV1Q96GA3 475 aaPredicted RBP38.02■■■■□ 3.68
LMO1-202ENST00000428101 GGNBP2Q9H3C7 697 aa38.02■■■■□ 3.68
LMO1-202ENST00000428101 FAM208AQ9UK61 1670 aaKnown RBP38.01■■■■□ 3.67
LMO1-202ENST00000428101 MYOM1P52179 1685 aa38■■■■□ 3.67
LMO1-202ENST00000428101 AMPHP49418 695 aa37.98■■■■□ 3.67
LMO1-202ENST00000428101 PROM2Q8N271 834 aa37.97■■■■□ 3.67
LMO1-202ENST00000428101 KCNQ2O43526 872 aa37.96■■■■□ 3.67
LMO1-202ENST00000428101 CARD14Q9BXL6 1004 aa37.96■■■■□ 3.67
LMO1-202ENST00000428101 KIF20BQ96Q89 1820 aa37.96■■■■□ 3.67
LMO1-202ENST00000428101 RRS1Q15050 365 aaKnown RBP37.95■■■■□ 3.67
LMO1-202ENST00000428101 RGPD2P0DJD1 1756 aa37.94■■■■□ 3.66
LMO1-202ENST00000428101 NHSQ6T4R5 1651 aa37.93■■■■□ 3.66
LMO1-202ENST00000428101 RTL1A6NKG5 1358 aa37.92■■■■□ 3.66
LMO1-202ENST00000428101 CCER1Q8TC90 406 aaPredicted RBP37.9■■■■□ 3.66
LMO1-202ENST00000428101 ACSBG1Q96GR2 724 aa37.9■■■■□ 3.66
LMO1-202ENST00000428101 KAT6BQ8WYB5 2073 aa37.89■■■■□ 3.66
LMO1-202ENST00000428101 ANO8Q9HCE9 1232 aaPredicted RBP37.89■■■■□ 3.66
LMO1-202ENST00000428101 NSD3Q9BZ95 1437 aa37.87■■■■□ 3.65
LMO1-202ENST00000428101 TXNRD1Q16881 649 aa37.85■■■■□ 3.65
LMO1-202ENST00000428101 NBPF6Q5VWK0 638 aa37.82■■■■□ 3.64
LMO1-202ENST00000428101 DDX54Q8TDD1 881 aaKnown RBP37.82■■■■□ 3.64
LMO1-202ENST00000428101 NBPF4Q96M43 638 aa37.82■■■■□ 3.64
LMO1-202ENST00000428101 BTAF1O14981 1849 aa37.81■■■■□ 3.64
LMO1-202ENST00000428101 HSP90AB2PQ58FF8 381 aa37.79■■■■□ 3.64
LMO1-202ENST00000428101 MEGF6O75095 1541 aa37.78■■■■□ 3.64
LMO1-202ENST00000428101 EIF4G2P78344 907 aaKnown RBP eCLIP37.78■■■■□ 3.64
LMO1-202ENST00000428101 INSRP06213 1382 aa37.78■■■■□ 3.64
LMO1-202ENST00000428101 SHANK3Q9BYB0 1731 aa37.78■■■■□ 3.64
LMO1-202ENST00000428101 HSPA5P11021 654 aaKnown RBP37.77■■■■□ 3.64
LMO1-202ENST00000428101 FLT4P35916 1363 aa37.76■■■■□ 3.64
LMO1-202ENST00000428101 KIF24Q5T7B8 1368 aa37.76■■■■□ 3.64
LMO1-202ENST00000428101 CASZ1Q86V15 1759 aa37.75■■■■□ 3.63
LMO1-202ENST00000428101 USHBP1Q8N6Y0 703 aa37.75■■■■□ 3.63
LMO1-202ENST00000428101 SMG6Q86US8 1419 aaKnown RBP37.74■■■■□ 3.63
LMO1-202ENST00000428101 ZCRB1Q8TBF4 217 aaKnown RBP37.74■■■■□ 3.63
LMO1-202ENST00000428101 POLR3GLQ9BT43 218 aa37.74■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms