RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
PSPC1-202ENST00000427943 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
PSPC1-202ENST00000427943 AXIN2Q9Y2T1 843 aa25.93■■□□□ 1.74
PSPC1-202ENST00000427943 USP31Q70CQ4 1352 aa25.92■■□□□ 1.74
PSPC1-202ENST00000427943 PUS7Q96PZ0 661 aaKnown RBP25.91■■□□□ 1.74
PSPC1-202ENST00000427943 THRAP3Q9Y2W1 955 aaKnown RBP25.91■■□□□ 1.74
PSPC1-202ENST00000427943 ABCC6O95255 1503 aa25.9■■□□□ 1.74
PSPC1-202ENST00000427943 BAG6P46379 1132 aa25.9■■□□□ 1.74
PSPC1-202ENST00000427943 TERF2IPQ9NYB0 399 aa25.9■■□□□ 1.74
PSPC1-202ENST00000427943 TOM1L2Q6ZVM7 507 aa25.89■■□□□ 1.74
PSPC1-202ENST00000427943 WDR17Q8IZU2 1322 aa25.88■■□□□ 1.73
PSPC1-202ENST00000427943 NINLQ9Y2I6 1382 aa25.88■■□□□ 1.73
PSPC1-202ENST00000427943 PDE3BQ13370 1112 aa25.88■■□□□ 1.73
PSPC1-202ENST00000427943 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
PSPC1-202ENST00000427943 OVOS2A0A0J9YW53 1432 aa25.87■■□□□ 1.73
PSPC1-202ENST00000427943 OVOS2Q6IE36 1432 aa25.87■■□□□ 1.73
PSPC1-202ENST00000427943 PEAK1Q9H792 1746 aa25.86■■□□□ 1.73
PSPC1-202ENST00000427943 FAM196AQ6ZSG2 479 aa25.86■■□□□ 1.73
PSPC1-202ENST00000427943 SBF2Q86WG5 1849 aa25.86■■□□□ 1.73
PSPC1-202ENST00000427943 TRIM37O94972 964 aa25.85■■□□□ 1.73
PSPC1-202ENST00000427943 MYOM1P52179 1685 aa25.84■■□□□ 1.73
PSPC1-202ENST00000427943 CSB-PGBD3P0DP91 1061 aa25.84■■□□□ 1.73
PSPC1-202ENST00000427943 EN1Q05925 392 aaPredicted RBP25.84■■□□□ 1.73
PSPC1-202ENST00000427943 DISP2A7MBM2 1401 aa25.83■■□□□ 1.73
PSPC1-202ENST00000427943 SLC24A1O60721 1099 aa25.83■■□□□ 1.73
PSPC1-202ENST00000427943 TMF1P82094 1093 aa25.83■■□□□ 1.73
PSPC1-202ENST00000427943 KIF20BQ96Q89 1820 aa25.82■■□□□ 1.72
PSPC1-202ENST00000427943 TIMELESSQ9UNS1 1208 aa25.82■■□□□ 1.72
PSPC1-202ENST00000427943 ANKRD36BQ8N2N9 1353 aa25.81■■□□□ 1.72
PSPC1-202ENST00000427943 RREB1Q92766 1687 aa25.8■■□□□ 1.72
PSPC1-202ENST00000427943 OVOS2A0A0G2JMS6 1433 aa25.79■■□□□ 1.72
PSPC1-202ENST00000427943 CARD10Q9BWT7 1032 aa25.78■■□□□ 1.72
PSPC1-202ENST00000427943 NUP188Q5SRE5 1749 aa25.77■■□□□ 1.72
PSPC1-202ENST00000427943 DDB1Q16531 1140 aa25.77■■□□□ 1.72
PSPC1-202ENST00000427943 EZH2Q15910 746 aaKnown RBP25.76■■□□□ 1.71
PSPC1-202ENST00000427943 FAM208AQ9UK61 1670 aaKnown RBP25.76■■□□□ 1.71
PSPC1-202ENST00000427943 ERBB3P21860 1342 aa25.75■■□□□ 1.71
PSPC1-202ENST00000427943 APBA3O96018 575 aa25.75■■□□□ 1.71
PSPC1-202ENST00000427943 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
PSPC1-202ENST00000427943 CCDC7Q96M83 1385 aa25.74■■□□□ 1.71
PSPC1-202ENST00000427943 PSDA5PKW4 1024 aaPredicted RBP25.74■■□□□ 1.71
PSPC1-202ENST00000427943 SRCAPQ6ZRS2 3230 aa25.73■■□□□ 1.71
PSPC1-202ENST00000427943 RGPD2P0DJD1 1756 aa25.73■■□□□ 1.71
PSPC1-202ENST00000427943 COG3Q96JB2 828 aa25.72■■□□□ 1.71
PSPC1-202ENST00000427943 CDCA7Q9BWT1 371 aaPredicted RBP25.72■■□□□ 1.71
PSPC1-202ENST00000427943 ANKRD24Q8TF21 1146 aa25.71■■□□□ 1.71
PSPC1-202ENST00000427943 CAMKK2Q96RR4 588 aa25.71■■□□□ 1.71
PSPC1-202ENST00000427943 RGPD3A6NKT7 1758 aaPredicted RBP25.7■■□□□ 1.7
PSPC1-202ENST00000427943 RGPD4Q7Z3J3 1758 aa25.7■■□□□ 1.7
PSPC1-202ENST00000427943 CDCA8Q53HL2 280 aa25.7■■□□□ 1.7
PSPC1-202ENST00000427943 NLRP2Q9NX02 1062 aa25.7■■□□□ 1.7
PSPC1-202ENST00000427943 TNS2Q63HR2 1409 aa25.7■■□□□ 1.7
PSPC1-202ENST00000427943 MARCH10Q8NA82 808 aaPredicted RBP25.69■■□□□ 1.7
PSPC1-202ENST00000427943 LRP5O75197 1615 aa25.69■■□□□ 1.7
PSPC1-202ENST00000427943 FBLN1P23142 703 aa25.68■■□□□ 1.7
PSPC1-202ENST00000427943 PARD3Q8TEW0 1356 aa25.68■■□□□ 1.7
PSPC1-202ENST00000427943 C11orf95C9JLR9 678 aaPredicted RBP25.67■■□□□ 1.7
PSPC1-202ENST00000427943 GGNBP2Q9H3C7 697 aa25.67■■□□□ 1.7
PSPC1-202ENST00000427943 MAP3K19Q56UN5 1328 aa25.66■■□□□ 1.7
PSPC1-202ENST00000427943 IP6K1Q92551 441 aa25.65■■□□□ 1.7
PSPC1-202ENST00000427943 LTV1Q96GA3 475 aaPredicted RBP25.65■■□□□ 1.7
PSPC1-202ENST00000427943 EXOC5O00471 708 aa25.64■■□□□ 1.7
PSPC1-202ENST00000427943 FYB1O15117 783 aa25.64■■□□□ 1.7
PSPC1-202ENST00000427943 R3HDM1Q15032 1099 aaKnown RBP25.64■■□□□ 1.7
PSPC1-202ENST00000427943 NSD3Q9BZ95 1437 aa25.63■■□□□ 1.69
PSPC1-202ENST00000427943 PTF1AQ7RTS3 328 aa25.63■■□□□ 1.69
PSPC1-202ENST00000427943 NHSQ6T4R5 1651 aa25.63■■□□□ 1.69
PSPC1-202ENST00000427943 BCL9O00512 1426 aa25.62■■□□□ 1.69
PSPC1-202ENST00000427943 KAT6BQ8WYB5 2073 aa25.61■■□□□ 1.69
PSPC1-202ENST00000427943 IL2RBP14784 551 aa25.61■■□□□ 1.69
PSPC1-202ENST00000427943 HOXC9P31274 260 aa25.61■■□□□ 1.69
PSPC1-202ENST00000427943 AMPHP49418 695 aa25.61■■□□□ 1.69
PSPC1-202ENST00000427943 RRS1Q15050 365 aaKnown RBP25.6■■□□□ 1.69
PSPC1-202ENST00000427943 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
PSPC1-202ENST00000427943 POLR3GLQ9BT43 218 aa25.59■■□□□ 1.69
PSPC1-202ENST00000427943 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
PSPC1-202ENST00000427943 SHANK3Q9BYB0 1731 aa25.58■■□□□ 1.69
PSPC1-202ENST00000427943 BCL11BQ9C0K0 894 aaPredicted RBP25.58■■□□□ 1.69
PSPC1-202ENST00000427943 ANKRD26Q9UPS8 1709 aa25.57■■□□□ 1.68
PSPC1-202ENST00000427943 BTAF1O14981 1849 aa25.57■■□□□ 1.68
PSPC1-202ENST00000427943 HSPA5P11021 654 aaKnown RBP25.56■■□□□ 1.68
PSPC1-202ENST00000427943 EIF4G2P78344 907 aaKnown RBP eCLIP25.56■■□□□ 1.68
PSPC1-202ENST00000427943 MAP2P11137 1827 aaKnown RBP25.54■■□□□ 1.68
PSPC1-202ENST00000427943 DOT1LQ8TEK3 1739 aa25.53■■□□□ 1.68
PSPC1-202ENST00000427943 PLSCR1O15162 318 aa25.52■■□□□ 1.68
PSPC1-202ENST00000427943 ACSBG1Q96GR2 724 aa25.52■■□□□ 1.68
PSPC1-202ENST00000427943 KCNQ2O43526 872 aa25.51■■□□□ 1.67
PSPC1-202ENST00000427943 NBPF14Q5TI25 921 aa25.51■■□□□ 1.67
PSPC1-202ENST00000427943 MEGF6O75095 1541 aa25.51■■□□□ 1.67
PSPC1-202ENST00000427943 SMG6Q86US8 1419 aaKnown RBP25.5■■□□□ 1.67
PSPC1-202ENST00000427943 FLT4P35916 1363 aa25.48■■□□□ 1.67
PSPC1-202ENST00000427943 INSRP06213 1382 aa25.47■■□□□ 1.67
PSPC1-202ENST00000427943 USHBP1Q8N6Y0 703 aa25.47■■□□□ 1.67
PSPC1-202ENST00000427943 CGNL1Q0VF96 1302 aa25.46■■□□□ 1.67
PSPC1-202ENST00000427943 HSP90AB2PQ58FF8 381 aa25.46■■□□□ 1.67
PSPC1-202ENST00000427943 NBPF6Q5VWK0 638 aa25.46■■□□□ 1.67
PSPC1-202ENST00000427943 DDX54Q8TDD1 881 aaKnown RBP25.46■■□□□ 1.67
PSPC1-202ENST00000427943 NBPF4Q96M43 638 aa25.46■■□□□ 1.67
PSPC1-202ENST00000427943 ANO8Q9HCE9 1232 aaPredicted RBP25.46■■□□□ 1.67
PSPC1-202ENST00000427943 EMILIN1Q9Y6C2 1016 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms