RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 USP31Q70CQ4 1352 aa28.79■■■□□ 2.2
HSPG2-205ENST00000427897 FAM182BQ5T319 152 aa28.78■■■□□ 2.2
HSPG2-205ENST00000427897 CRB1P82279 1406 aa28.77■■■□□ 2.2
HSPG2-205ENST00000427897 AXIN2Q9Y2T1 843 aa28.77■■■□□ 2.2
HSPG2-205ENST00000427897 THSD7AQ9UPZ6 1657 aa28.75■■■□□ 2.19
HSPG2-205ENST00000427897 COG3Q96JB2 828 aa28.75■■■□□ 2.19
HSPG2-205ENST00000427897 POLR3GLQ9BT43 218 aa28.75■■■□□ 2.19
HSPG2-205ENST00000427897 ANKRD36BQ8N2N9 1353 aa28.75■■■□□ 2.19
HSPG2-205ENST00000427897 EIF4G2P78344 907 aaKnown RBP eCLIP28.74■■■□□ 2.19
HSPG2-205ENST00000427897 WDR17Q8IZU2 1322 aa28.73■■■□□ 2.19
HSPG2-205ENST00000427897 COL18A1P39060 1754 aa28.71■■■□□ 2.19
HSPG2-205ENST00000427897 NFAT5O94916 1531 aa28.71■■■□□ 2.19
HSPG2-205ENST00000427897 FAM196AQ6ZSG2 479 aa28.71■■■□□ 2.19
HSPG2-205ENST00000427897 RGPD5Q99666 1765 aa28.7■■■□□ 2.19
HSPG2-205ENST00000427897 BAG6P46379 1132 aa28.7■■■□□ 2.18
HSPG2-205ENST00000427897 EP400Q96L91 3159 aa28.7■■■□□ 2.18
HSPG2-205ENST00000427897 DEFB132Q7Z7B7 95 aa28.69■■■□□ 2.18
HSPG2-205ENST00000427897 USP54Q70EL1 1684 aa28.68■■■□□ 2.18
HSPG2-205ENST00000427897 CARD10Q9BWT7 1032 aa28.66■■■□□ 2.18
HSPG2-205ENST00000427897 LTN1O94822 1766 aa28.65■■■□□ 2.18
HSPG2-205ENST00000427897 DDB1Q16531 1140 aa28.65■■■□□ 2.18
HSPG2-205ENST00000427897 OVOS2A0A0J9YW53 1432 aa28.64■■■□□ 2.18
HSPG2-205ENST00000427897 OVOS2Q6IE36 1432 aa28.64■■■□□ 2.18
HSPG2-205ENST00000427897 HSPA5P11021 654 aaKnown RBP28.64■■■□□ 2.18
HSPG2-205ENST00000427897 CDCA7Q9BWT1 371 aaPredicted RBP28.64■■■□□ 2.18
HSPG2-205ENST00000427897 NLRP2Q9NX02 1062 aa28.64■■■□□ 2.18
HSPG2-205ENST00000427897 TRIM37O94972 964 aa28.63■■■□□ 2.17
HSPG2-205ENST00000427897 ABCC6O95255 1503 aa28.63■■■□□ 2.17
HSPG2-205ENST00000427897 AMPHP49418 695 aa28.62■■■□□ 2.17
HSPG2-205ENST00000427897 GGNBP2Q9H3C7 697 aa28.62■■■□□ 2.17
HSPG2-205ENST00000427897 RGPD1P0DJD0 1748 aa28.61■■■□□ 2.17
HSPG2-205ENST00000427897 C11orf95C9JLR9 678 aaPredicted RBP28.61■■■□□ 2.17
HSPG2-205ENST00000427897 ANKRD24Q8TF21 1146 aa28.61■■■□□ 2.17
HSPG2-205ENST00000427897 FYB1O15117 783 aa28.6■■■□□ 2.17
HSPG2-205ENST00000427897 CCDC7Q96M83 1385 aa28.6■■■□□ 2.17
HSPG2-205ENST00000427897 PARP4Q9UKK3 1724 aaKnown RBP28.6■■■□□ 2.17
HSPG2-205ENST00000427897 EXOC5O00471 708 aa28.58■■■□□ 2.17
HSPG2-205ENST00000427897 IP6K1Q92551 441 aa28.58■■■□□ 2.17
HSPG2-205ENST00000427897 LTV1Q96GA3 475 aaPredicted RBP28.58■■■□□ 2.17
HSPG2-205ENST00000427897 ERBB3P21860 1342 aa28.58■■■□□ 2.17
HSPG2-205ENST00000427897 APBA3O96018 575 aa28.57■■■□□ 2.16
HSPG2-205ENST00000427897 EN1Q05925 392 aaPredicted RBP28.57■■■□□ 2.16
HSPG2-205ENST00000427897 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
HSPG2-205ENST00000427897 FBLN1P23142 703 aa28.54■■■□□ 2.16
HSPG2-205ENST00000427897 NSD3Q9BZ95 1437 aa28.53■■■□□ 2.16
HSPG2-205ENST00000427897 CARD14Q9BXL6 1004 aa28.53■■■□□ 2.16
HSPG2-205ENST00000427897 MYOM1P52179 1685 aa28.53■■■□□ 2.16
HSPG2-205ENST00000427897 KIF20BQ96Q89 1820 aa28.53■■■□□ 2.16
HSPG2-205ENST00000427897 OVOS2A0A0G2JMS6 1433 aa28.52■■■□□ 2.16
HSPG2-205ENST00000427897 WNK3Q9BYP7 1800 aa28.51■■■□□ 2.15
HSPG2-205ENST00000427897 HOXC9P31274 260 aa28.51■■■□□ 2.15
HSPG2-205ENST00000427897 RRS1Q15050 365 aaKnown RBP28.51■■■□□ 2.15
HSPG2-205ENST00000427897 LRRC37A3O60309 1634 aa28.51■■■□□ 2.15
HSPG2-205ENST00000427897 IL2RBP14784 551 aa28.5■■■□□ 2.15
HSPG2-205ENST00000427897 CGNL1Q0VF96 1302 aa28.49■■■□□ 2.15
HSPG2-205ENST00000427897 TNS1Q9HBL0 1735 aaKnown RBP28.47■■■□□ 2.15
HSPG2-205ENST00000427897 EZH2Q15910 746 aaKnown RBP28.47■■■□□ 2.15
HSPG2-205ENST00000427897 MARCH10Q8NA82 808 aaPredicted RBP28.46■■■□□ 2.15
HSPG2-205ENST00000427897 DISP2A7MBM2 1401 aa28.44■■■□□ 2.14
HSPG2-205ENST00000427897 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
HSPG2-205ENST00000427897 RTL1A6NKG5 1358 aa28.43■■■□□ 2.14
HSPG2-205ENST00000427897 FAM208AQ9UK61 1670 aaKnown RBP28.42■■■□□ 2.14
HSPG2-205ENST00000427897 PPM1GO15355 546 aaPredicted RBP28.42■■■□□ 2.14
HSPG2-205ENST00000427897 PANK3Q9H999 370 aa28.42■■■□□ 2.14
HSPG2-205ENST00000427897 CAMKK2Q96RR4 588 aa28.41■■■□□ 2.14
HSPG2-205ENST00000427897 TNS2Q63HR2 1409 aa28.4■■■□□ 2.14
HSPG2-205ENST00000427897 PARD3Q8TEW0 1356 aa28.39■■■□□ 2.14
HSPG2-205ENST00000427897 BCL11BQ9C0K0 894 aaPredicted RBP28.39■■■□□ 2.14
HSPG2-205ENST00000427897 PSDA5PKW4 1024 aaPredicted RBP28.38■■■□□ 2.13
HSPG2-205ENST00000427897 PEAK1Q9H792 1746 aa28.38■■■□□ 2.13
HSPG2-205ENST00000427897 NBPF14Q5TI25 921 aa28.37■■■□□ 2.13
HSPG2-205ENST00000427897 FLT4P35916 1363 aa28.37■■■□□ 2.13
HSPG2-205ENST00000427897 HSP90AB2PQ58FF8 381 aa28.36■■■□□ 2.13
HSPG2-205ENST00000427897 DDX54Q8TDD1 881 aaKnown RBP28.36■■■□□ 2.13
HSPG2-205ENST00000427897 SBF2Q86WG5 1849 aa28.36■■■□□ 2.13
HSPG2-205ENST00000427897 TNNT2P45379 298 aaPredicted RBP28.35■■■□□ 2.13
HSPG2-205ENST00000427897 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
HSPG2-205ENST00000427897 EMILIN1Q9Y6C2 1016 aa28.34■■■□□ 2.13
HSPG2-205ENST00000427897 INSRP06213 1382 aa28.34■■■□□ 2.13
HSPG2-205ENST00000427897 R3HDM1Q15032 1099 aaKnown RBP28.33■■■□□ 2.13
HSPG2-205ENST00000427897 RAPGEF4Q8WZA2 1011 aa28.33■■■□□ 2.13
HSPG2-205ENST00000427897 ACSBG1Q96GR2 724 aa28.33■■■□□ 2.13
HSPG2-205ENST00000427897 KNSTRNQ9Y448 316 aa28.33■■■□□ 2.13
HSPG2-205ENST00000427897 RGPD2P0DJD1 1756 aa28.32■■■□□ 2.12
HSPG2-205ENST00000427897 NBPF6Q5VWK0 638 aa28.32■■■□□ 2.12
HSPG2-205ENST00000427897 NBPF4Q96M43 638 aa28.32■■■□□ 2.12
HSPG2-205ENST00000427897 PLSCR1O15162 318 aa28.31■■■□□ 2.12
HSPG2-205ENST00000427897 USHBP1Q8N6Y0 703 aa28.31■■■□□ 2.12
HSPG2-205ENST00000427897 BCL9O00512 1426 aa28.31■■■□□ 2.12
HSPG2-205ENST00000427897 ZCRB1Q8TBF4 217 aaKnown RBP28.3■■■□□ 2.12
HSPG2-205ENST00000427897 MAP2P11137 1827 aaKnown RBP28.29■■■□□ 2.12
HSPG2-205ENST00000427897 TATP17735 454 aaPredicted RBP28.28■■■□□ 2.12
HSPG2-205ENST00000427897 PTF1AQ7RTS3 328 aa28.28■■■□□ 2.12
HSPG2-205ENST00000427897 MORC1Q86VD1 984 aa28.27■■■□□ 2.12
HSPG2-205ENST00000427897 KIF7Q2M1P5 1343 aa28.26■■■□□ 2.11
HSPG2-205ENST00000427897 KCNQ2O43526 872 aa28.26■■■□□ 2.11
HSPG2-205ENST00000427897 ANKRD26Q9UPS8 1709 aa28.26■■■□□ 2.11
HSPG2-205ENST00000427897 KAT6BQ8WYB5 2073 aa28.25■■■□□ 2.11
HSPG2-205ENST00000427897 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
HSPG2-205ENST00000427897 NSD2O96028 1365 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms