RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
SMARCAL1-206ENST00000427645 ALS2Q96Q42 1657 aa11.21□□□□□ -0.61
SMARCAL1-206ENST00000427645 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
SMARCAL1-206ENST00000427645 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.62
SMARCAL1-206ENST00000427645 ATP7BP35670 1465 aa11.2□□□□□ -0.62
SMARCAL1-206ENST00000427645 PPIP5K1Q6PFW1 1433 aa11.2□□□□□ -0.62
SMARCAL1-206ENST00000427645 ACEP12821 1306 aa11.2□□□□□ -0.62
SMARCAL1-206ENST00000427645 EVA1CP58658 441 aa11.2□□□□□ -0.62
SMARCAL1-206ENST00000427645 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
SMARCAL1-206ENST00000427645 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
SMARCAL1-206ENST00000427645 ITSN1Q15811 1721 aa11.19□□□□□ -0.62
SMARCAL1-206ENST00000427645 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
SMARCAL1-206ENST00000427645 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-206ENST00000427645 ZBTB7CA1YPR0 619 aa11.18□□□□□ -0.62
SMARCAL1-206ENST00000427645 APBA3O96018 575 aa11.18□□□□□ -0.62
SMARCAL1-206ENST00000427645 ABTB2Q8N961 1025 aa11.18□□□□□ -0.62
SMARCAL1-206ENST00000427645 CAMKK2Q96RR4 588 aa11.18□□□□□ -0.62
SMARCAL1-206ENST00000427645 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-206ENST00000427645 A0A1W2PP64 1363 aa11.17□□□□□ -0.62
SMARCAL1-206ENST00000427645 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-206ENST00000427645 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
SMARCAL1-206ENST00000427645 NSD2O96028 1365 aa11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 PDE3BQ13370 1112 aa11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 FAM196AQ6ZSG2 479 aa11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 THSD7AQ9UPZ6 1657 aa11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-206ENST00000427645 MYBBP1AQ9BQG0 1328 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-206ENST00000427645 SSH2Q76I76 1423 aa11.15□□□□□ -0.62
SMARCAL1-206ENST00000427645 POLR3AO14802 1390 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-206ENST00000427645 PARD3Q8TEW0 1356 aa11.15□□□□□ -0.63
SMARCAL1-206ENST00000427645 TOPAZ1Q8N9V7 1692 aa11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 CAMTA1Q9Y6Y1 1673 aa11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 LRP5O75197 1615 aa11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 AKAP12Q02952 1782 aa11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 GCP02774 474 aa11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 MORC1Q86VD1 984 aa11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 EDC4Q6P2E9 1401 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-206ENST00000427645 PHRF1Q9P1Y6 1649 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-206ENST00000427645 FYB1O15117 783 aa11.13□□□□□ -0.63
SMARCAL1-206ENST00000427645 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-206ENST00000427645 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
SMARCAL1-206ENST00000427645 NLRP13Q86W25 1043 aa11.13□□□□□ -0.63
SMARCAL1-206ENST00000427645 TCP11L2Q8N4U5 519 aa11.13□□□□□ -0.63
SMARCAL1-206ENST00000427645 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
SMARCAL1-206ENST00000427645 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
SMARCAL1-206ENST00000427645 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
SMARCAL1-206ENST00000427645 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
SMARCAL1-206ENST00000427645 TNS1Q9HBL0 1735 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-206ENST00000427645 USP19O94966 1318 aa11.11□□□□□ -0.63
SMARCAL1-206ENST00000427645 NLRP6P59044 892 aa11.11□□□□□ -0.63
SMARCAL1-206ENST00000427645 PTF1AQ7RTS3 328 aa11.11□□□□□ -0.63
SMARCAL1-206ENST00000427645 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-206ENST00000427645 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
SMARCAL1-206ENST00000427645 TTC21BQ7Z4L5 1316 aa11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 USP6P35125 1406 aa11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 SOX12O15370 315 aa11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 COG3Q96JB2 828 aa11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
SMARCAL1-206ENST00000427645 CPDO75976 1380 aa11.09□□□□□ -0.63
SMARCAL1-206ENST00000427645 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
SMARCAL1-206ENST00000427645 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
SMARCAL1-206ENST00000427645 COL5A2P05997 1499 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-206ENST00000427645 KIF20BQ96Q89 1820 aa11.08□□□□□ -0.64
SMARCAL1-206ENST00000427645 ANKRD26Q9UPS8 1709 aa11.08□□□□□ -0.64
SMARCAL1-206ENST00000427645 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
SMARCAL1-206ENST00000427645 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
SMARCAL1-206ENST00000427645 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-206ENST00000427645 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
SMARCAL1-206ENST00000427645 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
SMARCAL1-206ENST00000427645 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-206ENST00000427645 NME9Q86XW9 330 aa11.06□□□□□ -0.64
SMARCAL1-206ENST00000427645 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
SMARCAL1-206ENST00000427645 PDGFDQ9GZP0 370 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-206ENST00000427645 CRB1P82279 1406 aa11.06□□□□□ -0.64
SMARCAL1-206ENST00000427645 DDB1Q16531 1140 aa11.05□□□□□ -0.64
SMARCAL1-206ENST00000427645 AATKQ6ZMQ8 1374 aa11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 CCDC184Q52MB2 194 aa11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 PPP1R1BQ9UD71 204 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-206ENST00000427645 KCNQ2O43526 872 aa11.03□□□□□ -0.64
SMARCAL1-206ENST00000427645 MTHFSP49914 203 aa11.03□□□□□ -0.64
SMARCAL1-206ENST00000427645 PROM2Q8N271 834 aa11.03□□□□□ -0.64
SMARCAL1-206ENST00000427645 KCNH5Q8NCM2 988 aa11.03□□□□□ -0.64
SMARCAL1-206ENST00000427645 SPON1Q9HCB6 807 aa11.03□□□□□ -0.64
SMARCAL1-206ENST00000427645 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
SMARCAL1-206ENST00000427645 OVOS2A0A0G2JMS6 1433 aa11.02□□□□□ -0.64
SMARCAL1-206ENST00000427645 OVOS2A0A0J9YW53 1432 aa11.02□□□□□ -0.64
SMARCAL1-206ENST00000427645 OVOS2Q6IE36 1432 aa11.02□□□□□ -0.64
SMARCAL1-206ENST00000427645 RREB1Q92766 1687 aa11.02□□□□□ -0.64
SMARCAL1-206ENST00000427645 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
SMARCAL1-206ENST00000427645 YY1P25490 414 aa11.02□□□□□ -0.65
SMARCAL1-206ENST00000427645 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms