RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 LARP1Q6PKG0 1096 aaKnown RBP21.7■■□□□ 1.06
CLK3P2-201ENST00000427566 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
CLK3P2-201ENST00000427566 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
CLK3P2-201ENST00000427566 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
CLK3P2-201ENST00000427566 AATKQ6ZMQ8 1374 aa21.68■■□□□ 1.06
CLK3P2-201ENST00000427566 ARHGEF25Q86VW2 580 aa21.67■■□□□ 1.06
CLK3P2-201ENST00000427566 CCDC7Q96M83 1385 aa21.67■■□□□ 1.06
CLK3P2-201ENST00000427566 ONECUT3O60422 494 aaPredicted RBP21.66■■□□□ 1.06
CLK3P2-201ENST00000427566 COG3Q96JB2 828 aa21.66■■□□□ 1.06
CLK3P2-201ENST00000427566 PANK3Q9H999 370 aa21.66■■□□□ 1.06
CLK3P2-201ENST00000427566 NSD3Q9BZ95 1437 aa21.66■■□□□ 1.06
CLK3P2-201ENST00000427566 AXIN2Q9Y2T1 843 aa21.65■■□□□ 1.06
CLK3P2-201ENST00000427566 OVOS2A0A0J9YW53 1432 aa21.65■■□□□ 1.06
CLK3P2-201ENST00000427566 OVOS2Q6IE36 1432 aa21.65■■□□□ 1.06
CLK3P2-201ENST00000427566 THSD7AQ9UPZ6 1657 aa21.65■■□□□ 1.06
CLK3P2-201ENST00000427566 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.06
CLK3P2-201ENST00000427566 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.06
CLK3P2-201ENST00000427566 FYB1O15117 783 aa21.64■■□□□ 1.05
CLK3P2-201ENST00000427566 TOM1L2Q6ZVM7 507 aa21.64■■□□□ 1.05
CLK3P2-201ENST00000427566 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
CLK3P2-201ENST00000427566 CRB1P82279 1406 aa21.62■■□□□ 1.05
CLK3P2-201ENST00000427566 TCP11L2Q8N4U5 519 aa21.62■■□□□ 1.05
CLK3P2-201ENST00000427566 WNK3Q9BYP7 1800 aa21.61■■□□□ 1.05
CLK3P2-201ENST00000427566 FBLN1P23142 703 aa21.6■■□□□ 1.05
CLK3P2-201ENST00000427566 WDR17Q8IZU2 1322 aa21.59■■□□□ 1.05
CLK3P2-201ENST00000427566 FAM182BQ5T319 152 aa21.59■■□□□ 1.05
CLK3P2-201ENST00000427566 ABCC6O95255 1503 aa21.58■■□□□ 1.05
CLK3P2-201ENST00000427566 BARGINQ6ZT62 677 aa21.58■■□□□ 1.04
CLK3P2-201ENST00000427566 THRAP3Q9Y2W1 955 aaKnown RBP21.57■■□□□ 1.04
CLK3P2-201ENST00000427566 PARP4Q9UKK3 1724 aaKnown RBP21.56■■□□□ 1.04
CLK3P2-201ENST00000427566 AMPHP49418 695 aa21.55■■□□□ 1.04
CLK3P2-201ENST00000427566 PDE3BQ13370 1112 aa21.55■■□□□ 1.04
CLK3P2-201ENST00000427566 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
CLK3P2-201ENST00000427566 SF3B2Q13435 895 aaKnown RBP21.54■■□□□ 1.04
CLK3P2-201ENST00000427566 LTV1Q96GA3 475 aaPredicted RBP21.54■■□□□ 1.04
CLK3P2-201ENST00000427566 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
CLK3P2-201ENST00000427566 PER1O15534 1290 aaPredicted RBP21.53■■□□□ 1.04
CLK3P2-201ENST00000427566 ANKRD24Q8TF21 1146 aa21.53■■□□□ 1.04
CLK3P2-201ENST00000427566 MAP3K19Q56UN5 1328 aa21.53■■□□□ 1.04
CLK3P2-201ENST00000427566 ANKRD26Q9UPS8 1709 aa21.52■■□□□ 1.04
CLK3P2-201ENST00000427566 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.04
CLK3P2-201ENST00000427566 NLRP2Q9NX02 1062 aa21.52■■□□□ 1.04
CLK3P2-201ENST00000427566 MAP2P11137 1827 aaKnown RBP21.52■■□□□ 1.04
CLK3P2-201ENST00000427566 LRRC37A3O60309 1634 aa21.52■■□□□ 1.04
CLK3P2-201ENST00000427566 CCDC125Q86Z20 511 aa21.52■■□□□ 1.03
CLK3P2-201ENST00000427566 CARD10Q9BWT7 1032 aa21.52■■□□□ 1.03
CLK3P2-201ENST00000427566 RGPD1P0DJD0 1748 aa21.51■■□□□ 1.03
CLK3P2-201ENST00000427566 ERBB3P21860 1342 aa21.51■■□□□ 1.03
CLK3P2-201ENST00000427566 BLMP54132 1417 aaPredicted RBP21.51■■□□□ 1.03
CLK3P2-201ENST00000427566 IP6K1Q92551 441 aa21.51■■□□□ 1.03
CLK3P2-201ENST00000427566 KNSTRNQ9Y448 316 aa21.51■■□□□ 1.03
CLK3P2-201ENST00000427566 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
CLK3P2-201ENST00000427566 EP400Q96L91 3159 aa21.5■■□□□ 1.03
CLK3P2-201ENST00000427566 HOXC9P31274 260 aa21.48■■□□□ 1.03
CLK3P2-201ENST00000427566 DDB1Q16531 1140 aa21.48■■□□□ 1.03
CLK3P2-201ENST00000427566 AMER1Q5JTC6 1135 aaPredicted RBP21.48■■□□□ 1.03
CLK3P2-201ENST00000427566 TNNT2P45379 298 aaPredicted RBP21.46■■□□□ 1.03
CLK3P2-201ENST00000427566 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
CLK3P2-201ENST00000427566 PEAK1Q9H792 1746 aa21.46■■□□□ 1.03
CLK3P2-201ENST00000427566 CNGB1Q14028 1251 aaPredicted RBP21.45■■□□□ 1.03
CLK3P2-201ENST00000427566 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.03
CLK3P2-201ENST00000427566 TNS1Q9HBL0 1735 aaKnown RBP21.45■■□□□ 1.03
CLK3P2-201ENST00000427566 PPM1GO15355 546 aaPredicted RBP21.45■■□□□ 1.02
CLK3P2-201ENST00000427566 CDCA7Q9BWT1 371 aaPredicted RBP21.45■■□□□ 1.02
CLK3P2-201ENST00000427566 RTL1A6NKG5 1358 aa21.43■■□□□ 1.02
CLK3P2-201ENST00000427566 SBF2Q86WG5 1849 aa21.43■■□□□ 1.02
CLK3P2-201ENST00000427566 TRIM37O94972 964 aa21.43■■□□□ 1.02
CLK3P2-201ENST00000427566 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
CLK3P2-201ENST00000427566 EMILIN1Q9Y6C2 1016 aa21.43■■□□□ 1.02
CLK3P2-201ENST00000427566 EXOC5O00471 708 aa21.42■■□□□ 1.02
CLK3P2-201ENST00000427566 NSD2O96028 1365 aa21.42■■□□□ 1.02
CLK3P2-201ENST00000427566 DISP2A7MBM2 1401 aa21.42■■□□□ 1.02
CLK3P2-201ENST00000427566 KAT6BQ8WYB5 2073 aa21.42■■□□□ 1.02
CLK3P2-201ENST00000427566 IL2RBP14784 551 aa21.41■■□□□ 1.02
CLK3P2-201ENST00000427566 BAG6P46379 1132 aa21.41■■□□□ 1.02
CLK3P2-201ENST00000427566 SMG6Q86US8 1419 aaKnown RBP21.41■■□□□ 1.02
CLK3P2-201ENST00000427566 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
CLK3P2-201ENST00000427566 HSP90AB2PQ58FF8 381 aa21.4■■□□□ 1.02
CLK3P2-201ENST00000427566 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
CLK3P2-201ENST00000427566 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
CLK3P2-201ENST00000427566 FLT4P35916 1363 aa21.39■■□□□ 1.02
CLK3P2-201ENST00000427566 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
CLK3P2-201ENST00000427566 INSRP06213 1382 aa21.37■■□□□ 1.01
CLK3P2-201ENST00000427566 EN1Q05925 392 aaPredicted RBP21.37■■□□□ 1.01
CLK3P2-201ENST00000427566 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
CLK3P2-201ENST00000427566 MARCH10Q8NA82 808 aaPredicted RBP21.37■■□□□ 1.01
CLK3P2-201ENST00000427566 TNS2Q63HR2 1409 aa21.36■■□□□ 1.01
CLK3P2-201ENST00000427566 APBA3O96018 575 aa21.36■■□□□ 1.01
CLK3P2-201ENST00000427566 KIF24Q5T7B8 1368 aa21.35■■□□□ 1.01
CLK3P2-201ENST00000427566 NPC1L1Q9UHC9 1359 aa21.35■■□□□ 1.01
CLK3P2-201ENST00000427566 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
CLK3P2-201ENST00000427566 NBPF6Q5VWK0 638 aa21.34■■□□□ 1.01
CLK3P2-201ENST00000427566 NBPF4Q96M43 638 aa21.34■■□□□ 1.01
CLK3P2-201ENST00000427566 EZH2Q15910 746 aaKnown RBP21.31■■□□□ 1
CLK3P2-201ENST00000427566 DDX54Q8TDD1 881 aaKnown RBP21.31■■□□□ 1
CLK3P2-201ENST00000427566 SHANK3Q9BYB0 1731 aa21.29■■□□□ 1
CLK3P2-201ENST00000427566 MEGF6O75095 1541 aa21.29■■□□□ 1
CLK3P2-201ENST00000427566 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
CLK3P2-201ENST00000427566 ACSBG1Q96GR2 724 aa21.28■■□□□ 1
CLK3P2-201ENST00000427566 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms