RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
C9orf3-205ENST00000427193 RFC5P40937 340 aa11.69□□□□□ -0.54
C9orf3-205ENST00000427193 LCE2CQ5TA81 110 aa11.69□□□□□ -0.54
C9orf3-205ENST00000427193 ZBTB33Q86T24 672 aa11.69□□□□□ -0.54
C9orf3-205ENST00000427193 MEIOBQ8N635 442 aa11.69□□□□□ -0.54
C9orf3-205ENST00000427193 SLC10A4Q96EP9 437 aa11.69□□□□□ -0.54
C9orf3-205ENST00000427193 PTK2Q05397 1052 aa11.68□□□□□ -0.54
C9orf3-205ENST00000427193 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
C9orf3-205ENST00000427193 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-205ENST00000427193 INSM1Q01101 510 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-205ENST00000427193 LINC00528Q8N1L1 170 aa11.67□□□□□ -0.54
C9orf3-205ENST00000427193 C6orf118Q5T5N4 469 aa11.66□□□□□ -0.54
C9orf3-205ENST00000427193 BMP2P12643 396 aa11.65□□□□□ -0.54
C9orf3-205ENST00000427193 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
C9orf3-205ENST00000427193 IRF7Q92985 503 aa11.65□□□□□ -0.54
C9orf3-205ENST00000427193 KCTD15Q96SI1 283 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-205ENST00000427193 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-205ENST00000427193 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
C9orf3-205ENST00000427193 H3BM21 787 aa11.64□□□□□ -0.55
C9orf3-205ENST00000427193 PPP1R26Q5T8A7 1209 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-205ENST00000427193 OCSTAMPQ9BR26 566 aa11.64□□□□□ -0.55
C9orf3-205ENST00000427193 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
C9orf3-205ENST00000427193 DHX9Q08211 1270 aaKnown RBP11.63□□□□□ -0.55
C9orf3-205ENST00000427193 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
C9orf3-205ENST00000427193 MAN1A2O60476 641 aa11.62□□□□□ -0.55
C9orf3-205ENST00000427193 ADAM32Q8TC27 787 aa11.62□□□□□ -0.55
C9orf3-205ENST00000427193 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
C9orf3-205ENST00000427193 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
C9orf3-205ENST00000427193 VEGFBP49765 207 aa11.6□□□□□ -0.55
C9orf3-205ENST00000427193 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
C9orf3-205ENST00000427193 Q6ZVU0 165 aa11.6□□□□□ -0.55
C9orf3-205ENST00000427193 STK17AQ9UEE5 414 aa11.6□□□□□ -0.55
C9orf3-205ENST00000427193 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
C9orf3-205ENST00000427193 SOS2Q07890 1332 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-205ENST00000427193 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-205ENST00000427193 GMPRP36959 345 aa11.57□□□□□ -0.56
C9orf3-205ENST00000427193 TRIM34Q9BYJ4 488 aa11.57□□□□□ -0.56
C9orf3-205ENST00000427193 CBLBQ13191 982 aa11.56□□□□□ -0.56
C9orf3-205ENST00000427193 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
C9orf3-205ENST00000427193 DZIP3Q86Y13 1208 aaKnown RBP11.55□□□□□ -0.56
C9orf3-205ENST00000427193 DNMT3LQ9UJW3 386 aa11.55□□□□□ -0.56
C9orf3-205ENST00000427193 TTLL8A6PVC2 850 aa11.53□□□□□ -0.56
C9orf3-205ENST00000427193 SPINT1O43278 529 aa11.53□□□□□ -0.56
C9orf3-205ENST00000427193 VSIG8P0DPA2 414 aa11.53□□□□□ -0.56
C9orf3-205ENST00000427193 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.52□□□□□ -0.57
C9orf3-205ENST00000427193 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-205ENST00000427193 ESPNB1AK53 854 aa11.5□□□□□ -0.57
C9orf3-205ENST00000427193 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
C9orf3-205ENST00000427193 ZBBXA8MT70 800 aa11.49□□□□□ -0.57
C9orf3-205ENST00000427193 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
C9orf3-205ENST00000427193 SOCS7O14512 581 aa11.48□□□□□ -0.57
C9orf3-205ENST00000427193 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
C9orf3-205ENST00000427193 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
C9orf3-205ENST00000427193 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
C9orf3-205ENST00000427193 FAM181BA6NEQ2 426 aa11.47□□□□□ -0.57
C9orf3-205ENST00000427193 ERVH48-1M5A8F1 160 aa11.47□□□□□ -0.57
C9orf3-205ENST00000427193 RAB15P59190 212 aa11.47□□□□□ -0.57
C9orf3-205ENST00000427193 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-205ENST00000427193 RELBQ01201 579 aa11.46□□□□□ -0.57
C9orf3-205ENST00000427193 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
C9orf3-205ENST00000427193 ZSCAN1Q8NBB4 408 aa11.46□□□□□ -0.57
C9orf3-205ENST00000427193 AGBL1Q96MI9 1066 aa11.46□□□□□ -0.57
C9orf3-205ENST00000427193 FIGNL2A6NMB9 653 aa11.45□□□□□ -0.58
C9orf3-205ENST00000427193 PTSQ03393 145 aa11.45□□□□□ -0.58
C9orf3-205ENST00000427193 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
C9orf3-205ENST00000427193 LILRA1O75019 489 aa11.44□□□□□ -0.58
C9orf3-205ENST00000427193 ADH1AP07327 375 aa11.44□□□□□ -0.58
C9orf3-205ENST00000427193 FBXO45P0C2W1 286 aa11.44□□□□□ -0.58
C9orf3-205ENST00000427193 LORP23490 312 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-205ENST00000427193 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
C9orf3-205ENST00000427193 INSM2Q96T92 566 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-205ENST00000427193 PCDHB9Q9Y5E1 797 aa11.43□□□□□ -0.58
C9orf3-205ENST00000427193 CTSOP43234 321 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-205ENST00000427193 ZNF592Q92610 1267 aa11.42□□□□□ -0.58
C9orf3-205ENST00000427193 POLMQ9NP87 494 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-205ENST00000427193 APBB1O00213 710 aa11.41□□□□□ -0.58
C9orf3-205ENST00000427193 ADD1P35611 737 aaKnown RBP11.41□□□□□ -0.58
C9orf3-205ENST00000427193 MCCD1P59942 119 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-205ENST00000427193 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-205ENST00000427193 PTGIRP43119 386 aa11.4□□□□□ -0.58
C9orf3-205ENST00000427193 NR1H3Q13133 447 aa11.4□□□□□ -0.58
C9orf3-205ENST00000427193 NDUFB9Q9Y6M9 179 aa11.4□□□□□ -0.58
C9orf3-205ENST00000427193 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-205ENST00000427193 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
C9orf3-205ENST00000427193 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
C9orf3-205ENST00000427193 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-205ENST00000427193 SLC35F4A4IF30 521 aa11.38□□□□□ -0.59
C9orf3-205ENST00000427193 RNF20Q5VTR2 975 aa11.38□□□□□ -0.59
C9orf3-205ENST00000427193 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
C9orf3-205ENST00000427193 KDF1Q8NAX2 398 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-205ENST00000427193 CYLDQ9NQC7 956 aa11.38□□□□□ -0.59
C9orf3-205ENST00000427193 NANOS1Q8WY41 292 aaKnown RBP11.37□□□□□ -0.59
C9orf3-205ENST00000427193 GPR37L1O60883 481 aa11.35□□□□□ -0.59
C9orf3-205ENST00000427193 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-205ENST00000427193 SNRKQ9NRH2 765 aa11.35□□□□□ -0.59
C9orf3-205ENST00000427193 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
C9orf3-205ENST00000427193 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
C9orf3-205ENST00000427193 ITGA6P23229 1130 aa11.32□□□□□ -0.6
C9orf3-205ENST00000427193 CC2D2BQ6DHV5 1058 aa11.32□□□□□ -0.6
C9orf3-205ENST00000427193 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms