RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
VNN3-208ENST00000427187 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
VNN3-208ENST00000427187 SLIT3O75094 1523 aa12.62□□□□□ -0.39
VNN3-208ENST00000427187 USP6P35125 1406 aa12.62□□□□□ -0.39
VNN3-208ENST00000427187 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
VNN3-208ENST00000427187 SOX12O15370 315 aa12.61□□□□□ -0.39
VNN3-208ENST00000427187 PROM2Q8N271 834 aa12.61□□□□□ -0.39
VNN3-208ENST00000427187 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
VNN3-208ENST00000427187 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
VNN3-208ENST00000427187 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
VNN3-208ENST00000427187 CENPJQ9HC77 1338 aaPredicted RBP12.61□□□□□ -0.39
VNN3-208ENST00000427187 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
VNN3-208ENST00000427187 PLSCR1O15162 318 aa12.6□□□□□ -0.39
VNN3-208ENST00000427187 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
VNN3-208ENST00000427187 C11orf95C9JLR9 678 aaPredicted RBP12.58□□□□□ -0.4
VNN3-208ENST00000427187 PTGER2P43116 358 aa12.58□□□□□ -0.4
VNN3-208ENST00000427187 CPSF1Q10570 1443 aaKnown RBP12.58□□□□□ -0.4
VNN3-208ENST00000427187 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
VNN3-208ENST00000427187 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
VNN3-208ENST00000427187 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
VNN3-208ENST00000427187 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
VNN3-208ENST00000427187 ZNF784Q8NCA9 323 aaPredicted RBP12.56□□□□□ -0.4
VNN3-208ENST00000427187 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
VNN3-208ENST00000427187 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
VNN3-208ENST00000427187 FHDC1Q9C0D6 1143 aaPredicted RBP12.55□□□□□ -0.4
VNN3-208ENST00000427187 SLC15A2Q16348 729 aa12.54□□□□□ -0.4
VNN3-208ENST00000427187 ARHGEF25Q86VW2 580 aa12.54□□□□□ -0.4
VNN3-208ENST00000427187 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
VNN3-208ENST00000427187 EXOC5O00471 708 aa12.53□□□□□ -0.4
VNN3-208ENST00000427187 SYT17Q9BSW7 474 aa12.53□□□□□ -0.4
VNN3-208ENST00000427187 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
VNN3-208ENST00000427187 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
VNN3-208ENST00000427187 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
VNN3-208ENST00000427187 BCL9O00512 1426 aa12.53□□□□□ -0.4
VNN3-208ENST00000427187 TNS2Q63HR2 1409 aa12.52□□□□□ -0.41
VNN3-208ENST00000427187 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
VNN3-208ENST00000427187 NFAT5O94916 1531 aa12.52□□□□□ -0.41
VNN3-208ENST00000427187 TRPM1Q7Z4N2 1603 aa12.51□□□□□ -0.41
VNN3-208ENST00000427187 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
VNN3-208ENST00000427187 MTFR1LQ9H019 292 aa12.51□□□□□ -0.41
VNN3-208ENST00000427187 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
VNN3-208ENST00000427187 CHD4Q14839 1912 aa12.5□□□□□ -0.41
VNN3-208ENST00000427187 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
VNN3-208ENST00000427187 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
VNN3-208ENST00000427187 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
VNN3-208ENST00000427187 PAPPAQ13219 1627 aa12.5□□□□□ -0.41
VNN3-208ENST00000427187 BTAF1O14981 1849 aa12.49□□□□□ -0.41
VNN3-208ENST00000427187 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
VNN3-208ENST00000427187 ABCC6O95255 1503 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 KTN1Q86UP2 1357 aaKnown RBP12.48□□□□□ -0.41
VNN3-208ENST00000427187 CCDC7Q96M83 1385 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 ZNF827Q17R98 1081 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
VNN3-208ENST00000427187 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 ARXQ96QS3 562 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 NLRP2Q9NX02 1062 aa12.48□□□□□ -0.41
VNN3-208ENST00000427187 TTC21AQ8NDW8 1320 aa12.47□□□□□ -0.41
VNN3-208ENST00000427187 ZNF692Q9BU19 519 aaPredicted RBP12.47□□□□□ -0.41
VNN3-208ENST00000427187 LTN1O94822 1766 aa12.47□□□□□ -0.41
VNN3-208ENST00000427187 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
VNN3-208ENST00000427187 NME9Q86XW9 330 aa12.46□□□□□ -0.41
VNN3-208ENST00000427187 LRRC4BQ9NT99 713 aa12.46□□□□□ -0.41
VNN3-208ENST00000427187 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
VNN3-208ENST00000427187 ERBB3P21860 1342 aa12.45□□□□□ -0.42
VNN3-208ENST00000427187 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
VNN3-208ENST00000427187 IL2RBP14784 551 aa12.44□□□□□ -0.42
VNN3-208ENST00000427187 KCNQ4P56696 695 aa12.44□□□□□ -0.42
VNN3-208ENST00000427187 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
VNN3-208ENST00000427187 GPR162Q16538 588 aa12.44□□□□□ -0.42
VNN3-208ENST00000427187 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
VNN3-208ENST00000427187 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
VNN3-208ENST00000427187 ANKRD24Q8TF21 1146 aa12.43□□□□□ -0.42
VNN3-208ENST00000427187 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
VNN3-208ENST00000427187 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
VNN3-208ENST00000427187 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
VNN3-208ENST00000427187 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
VNN3-208ENST00000427187 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
VNN3-208ENST00000427187 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
VNN3-208ENST00000427187 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
VNN3-208ENST00000427187 USP31Q70CQ4 1352 aa12.41□□□□□ -0.42
VNN3-208ENST00000427187 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
VNN3-208ENST00000427187 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
VNN3-208ENST00000427187 PNPLA7Q6ZV29 1317 aa12.4□□□□□ -0.42
VNN3-208ENST00000427187 NLGN2Q8NFZ4 835 aa12.4□□□□□ -0.42
VNN3-208ENST00000427187 SYTL4Q96C24 671 aaPredicted RBP12.4□□□□□ -0.42
VNN3-208ENST00000427187 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.43
VNN3-208ENST00000427187 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
VNN3-208ENST00000427187 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
VNN3-208ENST00000427187 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
VNN3-208ENST00000427187 POLD1P28340 1107 aa12.38□□□□□ -0.43
VNN3-208ENST00000427187 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
VNN3-208ENST00000427187 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
VNN3-208ENST00000427187 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
VNN3-208ENST00000427187 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
VNN3-208ENST00000427187 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
VNN3-208ENST00000427187 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
VNN3-208ENST00000427187 FBLN1P23142 703 aa12.36□□□□□ -0.43
VNN3-208ENST00000427187 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
VNN3-208ENST00000427187 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms