RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 USP21Q9UK80 565 aa21.04■□□□□ 0.96
PHF1-203ENST00000427004 NWD2Q9ULI1 1742 aa21.04■□□□□ 0.96
PHF1-203ENST00000427004 CPDO75976 1380 aa21.03■□□□□ 0.96
PHF1-203ENST00000427004 PPM1GO15355 546 aaPredicted RBP21.03■□□□□ 0.96
PHF1-203ENST00000427004 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
PHF1-203ENST00000427004 LTV1Q96GA3 475 aaPredicted RBP21.03■□□□□ 0.96
PHF1-203ENST00000427004 FNBP4Q8N3X1 1017 aaPredicted RBP21.01■□□□□ 0.95
PHF1-203ENST00000427004 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.01■□□□□ 0.95
PHF1-203ENST00000427004 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
PHF1-203ENST00000427004 POLKQ9UBT6 870 aa20.99■□□□□ 0.95
PHF1-203ENST00000427004 COL5A2P05997 1499 aaPredicted RBP20.99■□□□□ 0.95
PHF1-203ENST00000427004 NSD2O96028 1365 aa20.98■□□□□ 0.95
PHF1-203ENST00000427004 GLI3P10071 1580 aa20.98■□□□□ 0.95
PHF1-203ENST00000427004 AMPHP49418 695 aa20.98■□□□□ 0.95
PHF1-203ENST00000427004 HSP90AB2PQ58FF8 381 aa20.98■□□□□ 0.95
PHF1-203ENST00000427004 AATKQ6ZMQ8 1374 aa20.97■□□□□ 0.95
PHF1-203ENST00000427004 HOXC9P31274 260 aa20.97■□□□□ 0.95
PHF1-203ENST00000427004 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
PHF1-203ENST00000427004 QTRT2Q9H974 415 aaKnown RBP20.97■□□□□ 0.95
PHF1-203ENST00000427004 USP35Q9P2H5 1018 aa20.97■□□□□ 0.95
PHF1-203ENST00000427004 CCDC9Q9Y3X0 531 aaKnown RBP20.97■□□□□ 0.95
PHF1-203ENST00000427004 ATRNO75882 1429 aa20.95■□□□□ 0.95
PHF1-203ENST00000427004 EVA1CP58658 441 aa20.94■□□□□ 0.94
PHF1-203ENST00000427004 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
PHF1-203ENST00000427004 IP6K1Q92551 441 aa20.94■□□□□ 0.94
PHF1-203ENST00000427004 ANKRD24Q8TF21 1146 aa20.93■□□□□ 0.94
PHF1-203ENST00000427004 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
PHF1-203ENST00000427004 NPC1L1Q9UHC9 1359 aa20.92■□□□□ 0.94
PHF1-203ENST00000427004 MTHFSP49914 203 aa20.91■□□□□ 0.94
PHF1-203ENST00000427004 PARD3Q8TEW0 1356 aa20.9■□□□□ 0.94
PHF1-203ENST00000427004 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
PHF1-203ENST00000427004 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
PHF1-203ENST00000427004 WNK3Q9BYP7 1800 aa20.9■□□□□ 0.94
PHF1-203ENST00000427004 FLT4P35916 1363 aa20.89■□□□□ 0.93
PHF1-203ENST00000427004 ERBB3P21860 1342 aa20.89■□□□□ 0.93
PHF1-203ENST00000427004 VPS72Q15906 364 aa20.89■□□□□ 0.93
PHF1-203ENST00000427004 TOM1L2Q6ZVM7 507 aa20.89■□□□□ 0.93
PHF1-203ENST00000427004 TRPC5Q9UL62 973 aaPredicted RBP20.89■□□□□ 0.93
PHF1-203ENST00000427004 BRWD3Q6RI45 1802 aa20.89■□□□□ 0.93
PHF1-203ENST00000427004 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
PHF1-203ENST00000427004 SMG6Q86US8 1419 aaKnown RBP20.88■□□□□ 0.93
PHF1-203ENST00000427004 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
PHF1-203ENST00000427004 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
PHF1-203ENST00000427004 WDR17Q8IZU2 1322 aa20.87■□□□□ 0.93
PHF1-203ENST00000427004 FAM98CQ17RN3 349 aaKnown RBP20.87■□□□□ 0.93
PHF1-203ENST00000427004 GJD4Q96KN9 370 aaPredicted RBP20.87■□□□□ 0.93
PHF1-203ENST00000427004 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
PHF1-203ENST00000427004 ABCC6O95255 1503 aa20.87■□□□□ 0.93
PHF1-203ENST00000427004 RTL1A6NKG5 1358 aa20.86■□□□□ 0.93
PHF1-203ENST00000427004 SPATA31A1Q5TZJ5 1347 aa20.86■□□□□ 0.93
PHF1-203ENST00000427004 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
PHF1-203ENST00000427004 BLMP54132 1417 aaPredicted RBP20.86■□□□□ 0.93
PHF1-203ENST00000427004 CRB1P82279 1406 aa20.86■□□□□ 0.93
PHF1-203ENST00000427004 INSRP06213 1382 aa20.85■□□□□ 0.93
PHF1-203ENST00000427004 NBPF6Q5VWK0 638 aa20.85■□□□□ 0.93
PHF1-203ENST00000427004 NBPF4Q96M43 638 aa20.85■□□□□ 0.93
PHF1-203ENST00000427004 COL3A1P02461 1466 aaPredicted RBP20.85■□□□□ 0.93
PHF1-203ENST00000427004 CDK12Q9NYV4 1490 aaPredicted RBP20.85■□□□□ 0.93
PHF1-203ENST00000427004 RGS12O14924 1447 aa20.85■□□□□ 0.93
PHF1-203ENST00000427004 RXRBP28702 533 aa20.83■□□□□ 0.93
PHF1-203ENST00000427004 CCDC184Q52MB2 194 aa20.83■□□□□ 0.93
PHF1-203ENST00000427004 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.93
PHF1-203ENST00000427004 A0A0G2JS52 829 aa20.82■□□□□ 0.92
PHF1-203ENST00000427004 RBM6P78332 1123 aaKnown RBP20.82■□□□□ 0.92
PHF1-203ENST00000427004 MYT1Q01538 1121 aa20.82■□□□□ 0.92
PHF1-203ENST00000427004 THSD7AQ9UPZ6 1657 aa20.81■□□□□ 0.92
PHF1-203ENST00000427004 FAM182BQ5T319 152 aa20.81■□□□□ 0.92
PHF1-203ENST00000427004 RGPD1P0DJD0 1748 aa20.81■□□□□ 0.92
PHF1-203ENST00000427004 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
PHF1-203ENST00000427004 EYA1Q99502 592 aa20.8■□□□□ 0.92
PHF1-203ENST00000427004 LRRC37A3O60309 1634 aa20.79■□□□□ 0.92
PHF1-203ENST00000427004 MEGF6O75095 1541 aa20.78■□□□□ 0.92
PHF1-203ENST00000427004 SEPT12Q8IYM1 358 aa20.78■□□□□ 0.92
PHF1-203ENST00000427004 TCP11L2Q8N4U5 519 aa20.78■□□□□ 0.92
PHF1-203ENST00000427004 UPF1Q92900 1129 aaKnown RBP eCLIP20.78■□□□□ 0.92
PHF1-203ENST00000427004 CARD10Q9BWT7 1032 aa20.78■□□□□ 0.92
PHF1-203ENST00000427004 KIF24Q5T7B8 1368 aa20.77■□□□□ 0.92
PHF1-203ENST00000427004 IL13P35225 146 aa20.77■□□□□ 0.92
PHF1-203ENST00000427004 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
PHF1-203ENST00000427004 HMOX1P09601 288 aa20.76■□□□□ 0.91
PHF1-203ENST00000427004 RALBP1Q15311 655 aa20.76■□□□□ 0.91
PHF1-203ENST00000427004 DISP2A7MBM2 1401 aa20.76■□□□□ 0.91
PHF1-203ENST00000427004 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
PHF1-203ENST00000427004 PARP4Q9UKK3 1724 aaKnown RBP20.75■□□□□ 0.91
PHF1-203ENST00000427004 U2SURPO15042 1029 aaKnown RBP20.74■□□□□ 0.91
PHF1-203ENST00000427004 DIAPH1O60610 1272 aaKnown RBP20.73■□□□□ 0.91
PHF1-203ENST00000427004 ANP32CO43423 234 aa20.71■□□□□ 0.91
PHF1-203ENST00000427004 IGSF1Q8N6C5 1336 aa20.71■□□□□ 0.91
PHF1-203ENST00000427004 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
PHF1-203ENST00000427004 SULT6B1Q6IMI4 303 aa20.7■□□□□ 0.9
PHF1-203ENST00000427004 BARGINQ6ZT62 677 aa20.7■□□□□ 0.9
PHF1-203ENST00000427004 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
PHF1-203ENST00000427004 IL2RBP14784 551 aa20.69■□□□□ 0.9
PHF1-203ENST00000427004 NCAPD2Q15021 1401 aa20.69■□□□□ 0.9
PHF1-203ENST00000427004 ONECUT3O60422 494 aaPredicted RBP20.68■□□□□ 0.9
PHF1-203ENST00000427004 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
PHF1-203ENST00000427004 THRAP3Q9Y2W1 955 aaKnown RBP20.66■□□□□ 0.9
PHF1-203ENST00000427004 PKD1L3Q7Z443 1732 aa20.66■□□□□ 0.9
PHF1-203ENST00000427004 MARCH10Q8NA82 808 aaPredicted RBP20.65■□□□□ 0.9
PHF1-203ENST00000427004 OVOS2A0A0G2JMS6 1433 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms