RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 NUP188Q5SRE5 1749 aa18.39■□□□□ 0.53
NELFE-203ENST00000426722 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.53
NELFE-203ENST00000426722 SBF2Q86WG5 1849 aa18.39■□□□□ 0.53
NELFE-203ENST00000426722 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
NELFE-203ENST00000426722 CPSF1Q10570 1443 aaKnown RBP18.39■□□□□ 0.53
NELFE-203ENST00000426722 WNK3Q9BYP7 1800 aa18.38■□□□□ 0.53
NELFE-203ENST00000426722 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
NELFE-203ENST00000426722 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
NELFE-203ENST00000426722 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
NELFE-203ENST00000426722 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
NELFE-203ENST00000426722 PLSCR1O15162 318 aa18.36■□□□□ 0.53
NELFE-203ENST00000426722 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
NELFE-203ENST00000426722 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
NELFE-203ENST00000426722 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
NELFE-203ENST00000426722 ABCC6O95255 1503 aa18.35■□□□□ 0.53
NELFE-203ENST00000426722 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
NELFE-203ENST00000426722 CARD10Q9BWT7 1032 aa18.35■□□□□ 0.53
NELFE-203ENST00000426722 BCL9O00512 1426 aa18.34■□□□□ 0.53
NELFE-203ENST00000426722 USP31Q70CQ4 1352 aa18.32■□□□□ 0.52
NELFE-203ENST00000426722 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
NELFE-203ENST00000426722 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
NELFE-203ENST00000426722 CARD11Q9BXL7 1154 aa18.32■□□□□ 0.52
NELFE-203ENST00000426722 BCL11BQ9C0K0 894 aaPredicted RBP18.32■□□□□ 0.52
NELFE-203ENST00000426722 NFAT5O94916 1531 aa18.32■□□□□ 0.52
NELFE-203ENST00000426722 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
NELFE-203ENST00000426722 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
NELFE-203ENST00000426722 EXOC5O00471 708 aa18.29■□□□□ 0.52
NELFE-203ENST00000426722 SOX12O15370 315 aa18.29■□□□□ 0.52
NELFE-203ENST00000426722 HDGFL2Q7Z4V5 671 aaPredicted RBP18.29■□□□□ 0.52
NELFE-203ENST00000426722 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
NELFE-203ENST00000426722 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
NELFE-203ENST00000426722 KCNQ2O43526 872 aa18.26■□□□□ 0.51
NELFE-203ENST00000426722 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
NELFE-203ENST00000426722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
NELFE-203ENST00000426722 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
NELFE-203ENST00000426722 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
NELFE-203ENST00000426722 LTN1O94822 1766 aa18.25■□□□□ 0.51
NELFE-203ENST00000426722 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
NELFE-203ENST00000426722 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
NELFE-203ENST00000426722 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
NELFE-203ENST00000426722 ERBB3P21860 1342 aa18.23■□□□□ 0.51
NELFE-203ENST00000426722 NME9Q86XW9 330 aa18.23■□□□□ 0.51
NELFE-203ENST00000426722 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
NELFE-203ENST00000426722 TNS2Q63HR2 1409 aa18.23■□□□□ 0.51
NELFE-203ENST00000426722 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
NELFE-203ENST00000426722 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
NELFE-203ENST00000426722 PROM2Q8N271 834 aa18.21■□□□□ 0.51
NELFE-203ENST00000426722 CASZ1Q86V15 1759 aa18.2■□□□□ 0.5
NELFE-203ENST00000426722 IL2RBP14784 551 aa18.2■□□□□ 0.5
NELFE-203ENST00000426722 PTF1AQ7RTS3 328 aa18.2■□□□□ 0.5
NELFE-203ENST00000426722 NHSQ6T4R5 1651 aa18.19■□□□□ 0.5
NELFE-203ENST00000426722 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
NELFE-203ENST00000426722 TXNRD1Q16881 649 aa18.19■□□□□ 0.5
NELFE-203ENST00000426722 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
NELFE-203ENST00000426722 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
NELFE-203ENST00000426722 ANKRD24Q8TF21 1146 aa18.18■□□□□ 0.5
NELFE-203ENST00000426722 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
NELFE-203ENST00000426722 STK32BQ9NY57 414 aa18.17■□□□□ 0.5
NELFE-203ENST00000426722 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
NELFE-203ENST00000426722 SLC15A2Q16348 729 aa18.16■□□□□ 0.5
NELFE-203ENST00000426722 IP6K1Q92551 441 aa18.16■□□□□ 0.5
NELFE-203ENST00000426722 TESK2Q96S53 571 aa18.15■□□□□ 0.5
NELFE-203ENST00000426722 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.5
NELFE-203ENST00000426722 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
NELFE-203ENST00000426722 COG3Q96JB2 828 aa18.13■□□□□ 0.49
NELFE-203ENST00000426722 ACSBG1Q96GR2 724 aa18.12■□□□□ 0.49
NELFE-203ENST00000426722 BTAF1O14981 1849 aa18.12■□□□□ 0.49
NELFE-203ENST00000426722 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
NELFE-203ENST00000426722 ZBTB7AO95365 584 aa18.09■□□□□ 0.49
NELFE-203ENST00000426722 YY1P25490 414 aa18.09■□□□□ 0.49
NELFE-203ENST00000426722 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
NELFE-203ENST00000426722 PTGER2P43116 358 aa18.08■□□□□ 0.48
NELFE-203ENST00000426722 AMPHP49418 695 aa18.08■□□□□ 0.48
NELFE-203ENST00000426722 TMF1P82094 1093 aa18.08■□□□□ 0.48
NELFE-203ENST00000426722 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.48
NELFE-203ENST00000426722 PAPPAQ13219 1627 aa18.08■□□□□ 0.48
NELFE-203ENST00000426722 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
NELFE-203ENST00000426722 HOXC9P31274 260 aa18.07■□□□□ 0.48
NELFE-203ENST00000426722 MYOM1P52179 1685 aa18.06■□□□□ 0.48
NELFE-203ENST00000426722 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
NELFE-203ENST00000426722 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
NELFE-203ENST00000426722 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
NELFE-203ENST00000426722 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
NELFE-203ENST00000426722 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
NELFE-203ENST00000426722 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
NELFE-203ENST00000426722 QSER1Q2KHR3 1735 aa18.04■□□□□ 0.48
NELFE-203ENST00000426722 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
NELFE-203ENST00000426722 RGPD2P0DJD1 1756 aa18.04■□□□□ 0.48
NELFE-203ENST00000426722 SGIP1Q9BQI5 828 aa18.03■□□□□ 0.48
NELFE-203ENST00000426722 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.48
NELFE-203ENST00000426722 FYB1O15117 783 aa18.02■□□□□ 0.48
NELFE-203ENST00000426722 ZCRB1Q8TBF4 217 aaKnown RBP18.02■□□□□ 0.48
NELFE-203ENST00000426722 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.48
NELFE-203ENST00000426722 SYT17Q9BSW7 474 aa18.02■□□□□ 0.48
NELFE-203ENST00000426722 USP47Q96K76 1375 aa18.02■□□□□ 0.47
NELFE-203ENST00000426722 LRRC4BQ9NT99 713 aa18.01■□□□□ 0.47
NELFE-203ENST00000426722 SMG6Q86US8 1419 aaKnown RBP18■□□□□ 0.47
NELFE-203ENST00000426722 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
NELFE-203ENST00000426722 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
NELFE-203ENST00000426722 LY75O60449 1722 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms