RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SLC12A5Q9H2X9 1139 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 ANKRD1Q15327 319 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 TRIM22Q8IYM9 498 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 SRCIN1Q9C0H9 1055 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 CABP1Q9NZU7 370 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 ZHX3Q9H4I2 956 aa21.31■■□□□ 1
ARHGEF28-203ENST00000426542 ZNF530Q6P9A1 599 aaPredicted RBP21.3■■□□□ 1
ARHGEF28-203ENST00000426542 NUP133Q8WUM0 1156 aa21.3■■□□□ 1
ARHGEF28-203ENST00000426542 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
ARHGEF28-203ENST00000426542 ZNHIT6Q9NWK9 470 aaKnown RBP21.3■■□□□ 1
ARHGEF28-203ENST00000426542 H0YHG0 523 aa21.3■■□□□ 1
ARHGEF28-203ENST00000426542 PAF1Q8N7H5 531 aa21.3■■□□□ 1
ARHGEF28-203ENST00000426542 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
ARHGEF28-203ENST00000426542 ME1P48163 572 aa21.29■■□□□ 1
ARHGEF28-203ENST00000426542 TNMDQ9H2S6 317 aa21.29■■□□□ 1
ARHGEF28-203ENST00000426542 SPG7Q9UQ90 795 aa21.29■■□□□ 1
ARHGEF28-203ENST00000426542 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
ARHGEF28-203ENST00000426542 CCDC57Q2TAC2 916 aa21.28■■□□□ 1
ARHGEF28-203ENST00000426542 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
ARHGEF28-203ENST00000426542 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
ARHGEF28-203ENST00000426542 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
ARHGEF28-203ENST00000426542 CWC15Q9P013 229 aaKnown RBP21.27■■□□□ 1
ARHGEF28-203ENST00000426542 CCDC192P0DO97 292 aa21.27■■□□□ 1
ARHGEF28-203ENST00000426542 AACSQ86V21 672 aa21.27■■□□□ 1
ARHGEF28-203ENST00000426542 MPHOSPH8Q99549 860 aa21.27■■□□□ 1
ARHGEF28-203ENST00000426542 TANGO6Q9C0B7 1094 aa21.27■■□□□ 1
ARHGEF28-203ENST00000426542 PPFIBP1Q86W92 1011 aa21.27■□□□□ 0.99
ARHGEF28-203ENST00000426542 DACH1Q9UI36 760 aa21.27■□□□□ 0.99
ARHGEF28-203ENST00000426542 ZNF692Q9BU19 519 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 RBM5P52756 815 aaKnown RBP eCLIP21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 K7ELQ4 463 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 STIM1Q13586 685 aa21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 SOGA3Q5TF21 947 aa21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 CCDC191Q8NCU4 936 aa21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 AXDND1Q5T1B0 1012 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 ZSCAN25Q6NSZ9 544 aa21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 DEF6Q9H4E7 631 aa21.26■□□□□ 0.99
ARHGEF28-203ENST00000426542 WDR33Q9C0J8 1336 aaKnown RBP21.25■□□□□ 0.99
ARHGEF28-203ENST00000426542 LARP1BQ659C4 914 aaKnown RBP21.24■□□□□ 0.99
ARHGEF28-203ENST00000426542 MTERF4Q7Z6M4 381 aaKnown RBP21.24■□□□□ 0.99
ARHGEF28-203ENST00000426542 AKNAQ7Z591 1439 aa21.24■□□□□ 0.99
ARHGEF28-203ENST00000426542 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
ARHGEF28-203ENST00000426542 WDR63Q8IWG1 891 aa21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 ATF7IPQ6VMQ6 1270 aa21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 MVPQ14764 893 aaKnown RBP21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 ERLIN2O94905 339 aa21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 KRT85P78386 507 aa21.23■□□□□ 0.99
ARHGEF28-203ENST00000426542 BTBD11A6QL63 1104 aa21.22■□□□□ 0.99
ARHGEF28-203ENST00000426542 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
ARHGEF28-203ENST00000426542 NOL7Q9UMY1 257 aaKnown RBP21.22■□□□□ 0.99
ARHGEF28-203ENST00000426542 NEFHP12036 1026 aa21.22■□□□□ 0.99
ARHGEF28-203ENST00000426542 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
ARHGEF28-203ENST00000426542 SRGAP3O43295 1099 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 CWC27Q6UX04 472 aaKnown RBP21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 CCDC181Q5TID7 509 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 CALRP27797 417 aaKnown RBP21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 MPNDQ8N594 471 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 SPINK5Q9NQ38 1064 aaPredicted RBP21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 RRS1Q15050 365 aaKnown RBP21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 THEMISQ8N1K5 641 aaPredicted RBP21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 CFTRP13569 1480 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 TDO2P48775 406 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 BLOC1S2Q6QNY1 142 aa21.21■□□□□ 0.99
ARHGEF28-203ENST00000426542 JAKMIP1Q96N16 626 aaKnown RBP21.2■□□□□ 0.98
ARHGEF28-203ENST00000426542 TSPYL1Q9H0U9 437 aa21.2■□□□□ 0.98
ARHGEF28-203ENST00000426542 LUC7LQ9NQ29 371 aaKnown RBP21.2■□□□□ 0.98
ARHGEF28-203ENST00000426542 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
ARHGEF28-203ENST00000426542 SF3B2Q13435 895 aaKnown RBP21.19■□□□□ 0.98
ARHGEF28-203ENST00000426542 SPATA32Q96LK8 384 aa21.19■□□□□ 0.98
ARHGEF28-203ENST00000426542 LEKR1Q6ZMV7 388 aa21.19■□□□□ 0.98
ARHGEF28-203ENST00000426542 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
ARHGEF28-203ENST00000426542 CDKL5O76039 1030 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 BRPF3Q9ULD4 1205 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 C9orf84Q5VXU9 1444 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 ERBINQ96RT1 1412 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 UBAC1Q9BSL1 405 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 RAI14Q9P0K7 980 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 RBM10P98175 930 aaKnown RBP21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 IL1RAPL2Q9NP60 686 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 GOLGA6L10A6NI86 522 aa21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 SSBP05455 408 aaKnown RBP eCLIP21.18■□□□□ 0.98
ARHGEF28-203ENST00000426542 KIAA1107Q9UPP5 1409 aa21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 CBFA2T2O43439 604 aa21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 ZSCAN29Q8IWY8 852 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 HMGN5P82970 282 aaKnown RBP21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 DHX8Q14562 1220 aaKnown RBP21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 PIBF1Q8WXW3 757 aa21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 SEPT11Q9NVA2 429 aaKnown RBP21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF28-203ENST00000426542 CEP126Q9P2H0 1117 aa21.16■□□□□ 0.98
ARHGEF28-203ENST00000426542 CTNNA3Q9UI47 895 aa21.16■□□□□ 0.98
ARHGEF28-203ENST00000426542 ANKRD62A6NC57 917 aa21.16■□□□□ 0.98
ARHGEF28-203ENST00000426542 SEPT7Q16181 437 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-203ENST00000426542 BICDL1Q6ZP65 573 aa21.15■□□□□ 0.98
ARHGEF28-203ENST00000426542 TXLNBQ8N3L3 684 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms