RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FHDC1Q9C0D6 1143 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-206ENST00000426196 TOM1L2Q6ZVM7 507 aa20.79■□□□□ 0.92
HDAC6-206ENST00000426196 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
HDAC6-206ENST00000426196 GOLGB1Q14789 3259 aaKnown RBP20.78■□□□□ 0.92
HDAC6-206ENST00000426196 PTF1AQ7RTS3 328 aa20.78■□□□□ 0.92
HDAC6-206ENST00000426196 PROM2Q8N271 834 aa20.78■□□□□ 0.92
HDAC6-206ENST00000426196 CEP350Q5VT06 3117 aa20.78■□□□□ 0.92
HDAC6-206ENST00000426196 BCL9O00512 1426 aa20.78■□□□□ 0.92
HDAC6-206ENST00000426196 BRD4O60885 1362 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-206ENST00000426196 CDCA7Q9BWT1 371 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-206ENST00000426196 MTFR1LQ9H019 292 aa20.77■□□□□ 0.92
HDAC6-206ENST00000426196 PPIP5K1Q6PFW1 1433 aa20.76■□□□□ 0.91
HDAC6-206ENST00000426196 SLC15A2Q16348 729 aa20.75■□□□□ 0.91
HDAC6-206ENST00000426196 TXNRD1Q16881 649 aa20.75■□□□□ 0.91
HDAC6-206ENST00000426196 SLIT3O75094 1523 aa20.74■□□□□ 0.91
HDAC6-206ENST00000426196 MARCH10Q8NA82 808 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-206ENST00000426196 COL18A1P39060 1754 aa20.73■□□□□ 0.91
HDAC6-206ENST00000426196 NLRP6P59044 892 aa20.73■□□□□ 0.91
HDAC6-206ENST00000426196 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
HDAC6-206ENST00000426196 WDR17Q8IZU2 1322 aa20.73■□□□□ 0.91
HDAC6-206ENST00000426196 IFFO2Q5TF58 517 aa20.72■□□□□ 0.91
HDAC6-206ENST00000426196 KIAA1210Q9ULL0 1709 aa20.71■□□□□ 0.91
HDAC6-206ENST00000426196 RGPD5Q99666 1765 aa20.7■□□□□ 0.9
HDAC6-206ENST00000426196 ARXQ96QS3 562 aa20.7■□□□□ 0.9
HDAC6-206ENST00000426196 SGIP1Q9BQI5 828 aa20.7■□□□□ 0.9
HDAC6-206ENST00000426196 RAB3GAP2Q9H2M9 1393 aa20.7■□□□□ 0.9
HDAC6-206ENST00000426196 USP6P35125 1406 aa20.7■□□□□ 0.9
HDAC6-206ENST00000426196 KAT6BQ8WYB5 2073 aa20.69■□□□□ 0.9
HDAC6-206ENST00000426196 MAP3K5Q99683 1374 aa20.69■□□□□ 0.9
HDAC6-206ENST00000426196 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
HDAC6-206ENST00000426196 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
HDAC6-206ENST00000426196 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
HDAC6-206ENST00000426196 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
HDAC6-206ENST00000426196 GIGYF1O75420 1035 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-206ENST00000426196 EXOC5O00471 708 aa20.66■□□□□ 0.9
HDAC6-206ENST00000426196 CSB-PGBD3P0DP91 1061 aa20.66■□□□□ 0.9
HDAC6-206ENST00000426196 GPR162Q16538 588 aa20.66■□□□□ 0.9
HDAC6-206ENST00000426196 CARD10Q9BWT7 1032 aa20.66■□□□□ 0.9
HDAC6-206ENST00000426196 AXIN2Q9Y2T1 843 aa20.66■□□□□ 0.9
HDAC6-206ENST00000426196 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
HDAC6-206ENST00000426196 TNS2Q63HR2 1409 aa20.64■□□□□ 0.89
HDAC6-206ENST00000426196 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
HDAC6-206ENST00000426196 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-206ENST00000426196 CCDC7Q96M83 1385 aa20.62■□□□□ 0.89
HDAC6-206ENST00000426196 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
HDAC6-206ENST00000426196 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
HDAC6-206ENST00000426196 ARHGEF25Q86VW2 580 aa20.61■□□□□ 0.89
HDAC6-206ENST00000426196 KCNH5Q8NCM2 988 aa20.61■□□□□ 0.89
HDAC6-206ENST00000426196 BTAF1O14981 1849 aa20.61■□□□□ 0.89
HDAC6-206ENST00000426196 ABCC6O95255 1503 aa20.58■□□□□ 0.89
HDAC6-206ENST00000426196 SOX12O15370 315 aa20.58■□□□□ 0.89
HDAC6-206ENST00000426196 KLHL34Q8N239 644 aa20.58■□□□□ 0.89
HDAC6-206ENST00000426196 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
HDAC6-206ENST00000426196 QSER1Q2KHR3 1735 aa20.57■□□□□ 0.88
HDAC6-206ENST00000426196 NBPF1Q3BBV0 1214 aa20.57■□□□□ 0.88
HDAC6-206ENST00000426196 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
HDAC6-206ENST00000426196 POLD1P28340 1107 aa20.56■□□□□ 0.88
HDAC6-206ENST00000426196 SHANK3Q9BYB0 1731 aa20.56■□□□□ 0.88
HDAC6-206ENST00000426196 ZNF827Q17R98 1081 aa20.55■□□□□ 0.88
HDAC6-206ENST00000426196 NFAT5O94916 1531 aa20.54■□□□□ 0.88
HDAC6-206ENST00000426196 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
HDAC6-206ENST00000426196 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
HDAC6-206ENST00000426196 COL24A1Q17RW2 1714 aa20.53■□□□□ 0.88
HDAC6-206ENST00000426196 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
HDAC6-206ENST00000426196 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-206ENST00000426196 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
HDAC6-206ENST00000426196 LRRC4BQ9NT99 713 aa20.5■□□□□ 0.87
HDAC6-206ENST00000426196 TUBGCP6Q96RT7 1819 aa20.49■□□□□ 0.87
HDAC6-206ENST00000426196 IL2RBP14784 551 aa20.49■□□□□ 0.87
HDAC6-206ENST00000426196 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
HDAC6-206ENST00000426196 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
HDAC6-206ENST00000426196 AKT1S1Q96B36 256 aa20.48■□□□□ 0.87
HDAC6-206ENST00000426196 ERBB3P21860 1342 aa20.48■□□□□ 0.87
HDAC6-206ENST00000426196 LTN1O94822 1766 aa20.47■□□□□ 0.87
HDAC6-206ENST00000426196 GRIN3BO60391 1043 aa20.47■□□□□ 0.87
HDAC6-206ENST00000426196 NLGN2Q8NFZ4 835 aa20.46■□□□□ 0.87
HDAC6-206ENST00000426196 PNPLA7Q6ZV29 1317 aa20.46■□□□□ 0.87
HDAC6-206ENST00000426196 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
HDAC6-206ENST00000426196 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
HDAC6-206ENST00000426196 MON2Q7Z3U7 1717 aa20.43■□□□□ 0.86
HDAC6-206ENST00000426196 USP54Q70EL1 1684 aa20.42■□□□□ 0.86
HDAC6-206ENST00000426196 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDAC6-206ENST00000426196 ATP10DQ9P241 1426 aa20.41■□□□□ 0.86
HDAC6-206ENST00000426196 LY75O60449 1722 aa20.39■□□□□ 0.86
HDAC6-206ENST00000426196 ANKRD24Q8TF21 1146 aa20.39■□□□□ 0.85
HDAC6-206ENST00000426196 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-206ENST00000426196 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
HDAC6-206ENST00000426196 DOT1LQ8TEK3 1739 aa20.37■□□□□ 0.85
HDAC6-206ENST00000426196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
HDAC6-206ENST00000426196 DDX54Q8TDD1 881 aaKnown RBP20.37■□□□□ 0.85
HDAC6-206ENST00000426196 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-206ENST00000426196 FAM208AQ9UK61 1670 aaKnown RBP20.37■□□□□ 0.85
HDAC6-206ENST00000426196 MSH5O43196 834 aa20.35■□□□□ 0.85
HDAC6-206ENST00000426196 HSPA6P17066 643 aa20.35■□□□□ 0.85
HDAC6-206ENST00000426196 KCNQ4P56696 695 aa20.35■□□□□ 0.85
HDAC6-206ENST00000426196 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
HDAC6-206ENST00000426196 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
HDAC6-206ENST00000426196 NME9Q86XW9 330 aa20.32■□□□□ 0.84
HDAC6-206ENST00000426196 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-206ENST00000426196 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms