RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
SNX3-204ENST00000426155 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
SNX3-204ENST00000426155 SEPT12Q8IYM1 358 aa19.04■□□□□ 0.64
SNX3-204ENST00000426155 A0A0G2JS52 829 aa19.03■□□□□ 0.64
SNX3-204ENST00000426155 MYT1Q01538 1121 aa19.03■□□□□ 0.64
SNX3-204ENST00000426155 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
SNX3-204ENST00000426155 AATKQ6ZMQ8 1374 aa19.03■□□□□ 0.64
SNX3-204ENST00000426155 SPATA31A1Q5TZJ5 1347 aa19.02■□□□□ 0.64
SNX3-204ENST00000426155 KCNH5Q8NCM2 988 aa19.02■□□□□ 0.64
SNX3-204ENST00000426155 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
SNX3-204ENST00000426155 ONECUT3O60422 494 aaPredicted RBP19.01■□□□□ 0.63
SNX3-204ENST00000426155 EVA1CP58658 441 aa19.01■□□□□ 0.63
SNX3-204ENST00000426155 CDCA8Q53HL2 280 aa19.01■□□□□ 0.63
SNX3-204ENST00000426155 ARHGEF25Q86VW2 580 aa19.01■□□□□ 0.63
SNX3-204ENST00000426155 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
SNX3-204ENST00000426155 AXIN2Q9Y2T1 843 aa19.01■□□□□ 0.63
SNX3-204ENST00000426155 ABCC6O95255 1503 aa18.98■□□□□ 0.63
SNX3-204ENST00000426155 CRB1P82279 1406 aa18.98■□□□□ 0.63
SNX3-204ENST00000426155 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
SNX3-204ENST00000426155 PARP4Q9UKK3 1724 aaKnown RBP18.97■□□□□ 0.63
SNX3-204ENST00000426155 RNF216Q9NWF9 866 aaPredicted RBP18.97■□□□□ 0.63
SNX3-204ENST00000426155 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
SNX3-204ENST00000426155 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
SNX3-204ENST00000426155 FAM182BQ5T319 152 aa18.95■□□□□ 0.62
SNX3-204ENST00000426155 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
SNX3-204ENST00000426155 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
SNX3-204ENST00000426155 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
SNX3-204ENST00000426155 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
SNX3-204ENST00000426155 FBLN1P23142 703 aa18.94■□□□□ 0.62
SNX3-204ENST00000426155 FYB1O15117 783 aa18.93■□□□□ 0.62
SNX3-204ENST00000426155 COG3Q96JB2 828 aa18.93■□□□□ 0.62
SNX3-204ENST00000426155 ANKRD26Q9UPS8 1709 aa18.93■□□□□ 0.62
SNX3-204ENST00000426155 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
SNX3-204ENST00000426155 RGPD2P0DJD1 1756 aa18.93■□□□□ 0.62
SNX3-204ENST00000426155 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
SNX3-204ENST00000426155 TCP11L2Q8N4U5 519 aa18.92■□□□□ 0.62
SNX3-204ENST00000426155 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
SNX3-204ENST00000426155 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
SNX3-204ENST00000426155 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
SNX3-204ENST00000426155 BARGINQ6ZT62 677 aa18.9■□□□□ 0.62
SNX3-204ENST00000426155 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
SNX3-204ENST00000426155 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
SNX3-204ENST00000426155 ERBB3P21860 1342 aa18.89■□□□□ 0.61
SNX3-204ENST00000426155 MAP3K19Q56UN5 1328 aa18.89■□□□□ 0.61
SNX3-204ENST00000426155 BLMP54132 1417 aaPredicted RBP18.88■□□□□ 0.61
SNX3-204ENST00000426155 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
SNX3-204ENST00000426155 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
SNX3-204ENST00000426155 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
SNX3-204ENST00000426155 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
SNX3-204ENST00000426155 KIF7Q2M1P5 1343 aa18.86■□□□□ 0.61
SNX3-204ENST00000426155 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
SNX3-204ENST00000426155 SBF2Q86WG5 1849 aa18.84■□□□□ 0.61
SNX3-204ENST00000426155 IP6K1Q92551 441 aa18.84■□□□□ 0.61
SNX3-204ENST00000426155 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
SNX3-204ENST00000426155 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
SNX3-204ENST00000426155 PANK3Q9H999 370 aa18.84■□□□□ 0.61
SNX3-204ENST00000426155 HOXC9P31274 260 aa18.83■□□□□ 0.6
SNX3-204ENST00000426155 DEFB132Q7Z7B7 95 aa18.83■□□□□ 0.6
SNX3-204ENST00000426155 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
SNX3-204ENST00000426155 AMPHP49418 695 aa18.82■□□□□ 0.6
SNX3-204ENST00000426155 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
SNX3-204ENST00000426155 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
SNX3-204ENST00000426155 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
SNX3-204ENST00000426155 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
SNX3-204ENST00000426155 CCDC125Q86Z20 511 aa18.8■□□□□ 0.6
SNX3-204ENST00000426155 DDB1Q16531 1140 aa18.79■□□□□ 0.6
SNX3-204ENST00000426155 EMILIN1Q9Y6C2 1016 aa18.79■□□□□ 0.6
SNX3-204ENST00000426155 SHANK3Q9BYB0 1731 aa18.79■□□□□ 0.6
SNX3-204ENST00000426155 OVOS2A0A0G2JMS6 1433 aa18.78■□□□□ 0.6
SNX3-204ENST00000426155 TNS2Q63HR2 1409 aa18.78■□□□□ 0.6
SNX3-204ENST00000426155 TRIM37O94972 964 aa18.77■□□□□ 0.6
SNX3-204ENST00000426155 SF3B2Q13435 895 aaKnown RBP18.77■□□□□ 0.6
SNX3-204ENST00000426155 FLT4P35916 1363 aa18.77■□□□□ 0.6
SNX3-204ENST00000426155 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
SNX3-204ENST00000426155 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
SNX3-204ENST00000426155 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
SNX3-204ENST00000426155 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
SNX3-204ENST00000426155 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
SNX3-204ENST00000426155 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
SNX3-204ENST00000426155 MEGF6O75095 1541 aa18.74■□□□□ 0.59
SNX3-204ENST00000426155 INSRP06213 1382 aa18.74■□□□□ 0.59
SNX3-204ENST00000426155 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
SNX3-204ENST00000426155 CDCA7Q9BWT1 371 aaPredicted RBP18.74■□□□□ 0.59
SNX3-204ENST00000426155 RREB1Q92766 1687 aa18.73■□□□□ 0.59
SNX3-204ENST00000426155 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
SNX3-204ENST00000426155 IL2RBP14784 551 aa18.73■□□□□ 0.59
SNX3-204ENST00000426155 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
SNX3-204ENST00000426155 KIF24Q5T7B8 1368 aa18.72■□□□□ 0.59
SNX3-204ENST00000426155 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
SNX3-204ENST00000426155 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 NSD2O96028 1365 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 NHSQ6T4R5 1651 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 BAG6P46379 1132 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 NBPF6Q5VWK0 638 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 NBPF4Q96M43 638 aa18.71■□□□□ 0.59
SNX3-204ENST00000426155 EXOC5O00471 708 aa18.7■□□□□ 0.58
SNX3-204ENST00000426155 DOT1LQ8TEK3 1739 aa18.7■□□□□ 0.58
SNX3-204ENST00000426155 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
SNX3-204ENST00000426155 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms