RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 CCDC116Q8IYX3 515 aa7.48□□□□□ -1.21
R3HDM1-205ENST00000425804 SENP3-EIF4A1A0A087X0R7 540 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 SPDYE5A6NIY4 337 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 F12P00748 615 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 CLCN1P35523 988 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 VASH1Q7L8A9 365 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 NEDD1Q8NHV4 660 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 KRTAP4-12Q9BQ66 201 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 C1QTNF2Q9BXJ5 285 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 MAP4K5Q9Y4K4 846 aa7.47□□□□□ -1.21
R3HDM1-205ENST00000425804 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
R3HDM1-205ENST00000425804 CTSOP43234 321 aaPredicted RBP7.46□□□□□ -1.22
R3HDM1-205ENST00000425804 Q6ZVU0 165 aa7.46□□□□□ -1.22
R3HDM1-205ENST00000425804 SPIRE2Q8WWL2 714 aa7.46□□□□□ -1.22
R3HDM1-205ENST00000425804 KRBA1A5PL33 1030 aa7.44□□□□□ -1.22
R3HDM1-205ENST00000425804 BCRP11274 1271 aa7.44□□□□□ -1.22
R3HDM1-205ENST00000425804 CUEDC1Q9NWM3 386 aaPredicted RBP7.44□□□□□ -1.22
R3HDM1-205ENST00000425804 PPP1R26Q5T8A7 1209 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-205ENST00000425804 INSM2Q96T92 566 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-205ENST00000425804 MBIPQ9NS73 344 aa7.43□□□□□ -1.22
R3HDM1-205ENST00000425804 TRMT44Q8IYL2 757 aaKnown RBP7.42□□□□□ -1.22
R3HDM1-205ENST00000425804 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
R3HDM1-205ENST00000425804 CCDC102AQ96A19 550 aa7.42□□□□□ -1.22
R3HDM1-205ENST00000425804 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
R3HDM1-205ENST00000425804 IGF1RP08069 1367 aa7.42□□□□□ -1.22
R3HDM1-205ENST00000425804 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
R3HDM1-205ENST00000425804 AGBL1Q96MI9 1066 aa7.41□□□□□ -1.22
R3HDM1-205ENST00000425804 POLMQ9NP87 494 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-205ENST00000425804 MINK1Q8N4C8 1332 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-205ENST00000425804 ACDQ96AP0 544 aa7.4□□□□□ -1.22
R3HDM1-205ENST00000425804 KRTAP9-9Q9BYP9 154 aa7.4□□□□□ -1.22
R3HDM1-205ENST00000425804 KRTAP9-4Q9BYQ2 154 aa7.4□□□□□ -1.22
R3HDM1-205ENST00000425804 RELBQ01201 579 aa7.39□□□□□ -1.23
R3HDM1-205ENST00000425804 MAGEB6P1A0A0J9YX57 407 aa7.38□□□□□ -1.23
R3HDM1-205ENST00000425804 KRI1Q8N9T8 703 aaKnown RBP7.38□□□□□ -1.23
R3HDM1-205ENST00000425804 GPR25O00155 361 aa7.37□□□□□ -1.23
R3HDM1-205ENST00000425804 ZNF837Q96EG3 531 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-205ENST00000425804 BTBD11A6QL63 1104 aa7.36□□□□□ -1.23
R3HDM1-205ENST00000425804 ITGB7P26010 798 aa7.36□□□□□ -1.23
R3HDM1-205ENST00000425804 SSTR3P32745 418 aaPredicted RBP7.36□□□□□ -1.23
R3HDM1-205ENST00000425804 SNRPNP63162 240 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-205ENST00000425804 SH3BP5LQ7L8J4 393 aa7.36□□□□□ -1.23
R3HDM1-205ENST00000425804 PER1O15534 1290 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-205ENST00000425804 COL8A1P27658 744 aa7.35□□□□□ -1.23
R3HDM1-205ENST00000425804 ARMC2Q8NEN0 867 aa7.35□□□□□ -1.23
R3HDM1-205ENST00000425804 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
R3HDM1-205ENST00000425804 ZNF395Q9H8N7 513 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-205ENST00000425804 LRRC4BQ9NT99 713 aa7.35□□□□□ -1.23
R3HDM1-205ENST00000425804 NBPF14Q5TI25 921 aa7.34□□□□□ -1.23
R3HDM1-205ENST00000425804 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-205ENST00000425804 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.23
R3HDM1-205ENST00000425804 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
R3HDM1-205ENST00000425804 FOXR1Q6PIV2 292 aa7.33□□□□□ -1.24
R3HDM1-205ENST00000425804 TRIM22Q8IYM9 498 aa7.33□□□□□ -1.24
R3HDM1-205ENST00000425804 PCDHB15Q9Y5E8 787 aa7.33□□□□□ -1.24
R3HDM1-205ENST00000425804 OIP5O43482 229 aa7.32□□□□□ -1.24
R3HDM1-205ENST00000425804 HRCP23327 699 aa7.32□□□□□ -1.24
R3HDM1-205ENST00000425804 ERFEQ4G0M1 354 aa7.32□□□□□ -1.24
R3HDM1-205ENST00000425804 ZMYM1Q5SVZ6 1142 aa7.32□□□□□ -1.24
R3HDM1-205ENST00000425804 GJA5P36382 358 aa7.31□□□□□ -1.24
R3HDM1-205ENST00000425804 RSBN1LQ6PCB5 846 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-205ENST00000425804 LYSMD3Q7Z3D4 306 aa7.31□□□□□ -1.24
R3HDM1-205ENST00000425804 GMCL1Q96IK5 515 aa7.31□□□□□ -1.24
R3HDM1-205ENST00000425804 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
R3HDM1-205ENST00000425804 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-205ENST00000425804 DBN1Q16643 649 aa7.3□□□□□ -1.24
R3HDM1-205ENST00000425804 PRPF38BQ5VTL8 546 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-205ENST00000425804 ZBTB3Q9H5J0 574 aa7.3□□□□□ -1.24
R3HDM1-205ENST00000425804 KCTD15Q96SI1 283 aaPredicted RBP7.29□□□□□ -1.24
R3HDM1-205ENST00000425804 SEMA6BQ9H3T3 888 aa7.29□□□□□ -1.24
R3HDM1-205ENST00000425804 C1QTNF9BB2RNN3 333 aa7.28□□□□□ -1.24
R3HDM1-205ENST00000425804 RHOQP17081 205 aa7.28□□□□□ -1.24
R3HDM1-205ENST00000425804 MX2P20592 715 aa7.28□□□□□ -1.24
R3HDM1-205ENST00000425804 RIPOR1Q6ZS17 1223 aa7.28□□□□□ -1.24
R3HDM1-205ENST00000425804 CABLES1Q8TDN4 633 aa7.28□□□□□ -1.24
R3HDM1-205ENST00000425804 GTPBP3Q969Y2 492 aaKnown RBP7.28□□□□□ -1.24
R3HDM1-205ENST00000425804 SHISA8B8ZZ34 492 aa7.27□□□□□ -1.25
R3HDM1-205ENST00000425804 GRIN2CQ14957 1233 aa7.27□□□□□ -1.25
R3HDM1-205ENST00000425804 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
R3HDM1-205ENST00000425804 TSC1Q92574 1164 aa7.27□□□□□ -1.25
R3HDM1-205ENST00000425804 INTS6LQ5JSJ4 861 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 PRICKLE2Q7Z3G6 844 aa7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 CD163Q86VB7 1156 aa7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 TRERF1Q96PN7 1200 aa7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 TBC1D2Q9BYX2 928 aa7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 RRAGCQ9HB90 399 aa7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 NSFL1CQ9UNZ2 370 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-205ENST00000425804 ADH1AP07327 375 aa7.25□□□□□ -1.25
R3HDM1-205ENST00000425804 SLC10A4Q96EP9 437 aa7.25□□□□□ -1.25
R3HDM1-205ENST00000425804 SUV39H2Q9H5I1 410 aa7.25□□□□□ -1.25
R3HDM1-205ENST00000425804 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
R3HDM1-205ENST00000425804 PTGIRP43119 386 aa7.24□□□□□ -1.25
R3HDM1-205ENST00000425804 KDF1Q8NAX2 398 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-205ENST00000425804 GPKOWQ92917 476 aaPredicted RBP eCLIP7.24□□□□□ -1.25
R3HDM1-205ENST00000425804 BEGAINQ9BUH8 593 aa7.24□□□□□ -1.25
R3HDM1-205ENST00000425804 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-205ENST00000425804 C1orf229Q6ZS94 237 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-205ENST00000425804 TMPRSS4Q9NRS4 437 aa7.23□□□□□ -1.25
R3HDM1-205ENST00000425804 H7C1W4 665 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms