RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
SGCE-203ENST00000425444 CENPJQ9HC77 1338 aaPredicted RBP18.19■□□□□ 0.5
SGCE-203ENST00000425444 LMO7Q8WWI1 1683 aa18.18■□□□□ 0.5
SGCE-203ENST00000425444 TXNRD1Q16881 649 aa18.18■□□□□ 0.5
SGCE-203ENST00000425444 ABTB2Q8N961 1025 aa18.18■□□□□ 0.5
SGCE-203ENST00000425444 TRPM1Q7Z4N2 1603 aa18.18■□□□□ 0.5
SGCE-203ENST00000425444 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
SGCE-203ENST00000425444 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
SGCE-203ENST00000425444 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
SGCE-203ENST00000425444 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
SGCE-203ENST00000425444 COL5A2P05997 1499 aaPredicted RBP18.17■□□□□ 0.5
SGCE-203ENST00000425444 CRB1P82279 1406 aa18.16■□□□□ 0.5
SGCE-203ENST00000425444 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
SGCE-203ENST00000425444 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
SGCE-203ENST00000425444 GCP02774 474 aa18.14■□□□□ 0.49
SGCE-203ENST00000425444 PELP1Q8IZL8 1130 aaKnown RBP18.14■□□□□ 0.49
SGCE-203ENST00000425444 QRICH2Q9H0J4 1663 aa18.14■□□□□ 0.49
SGCE-203ENST00000425444 ACEP12821 1306 aa18.14■□□□□ 0.49
SGCE-203ENST00000425444 MAP3K5Q99683 1374 aa18.14■□□□□ 0.49
SGCE-203ENST00000425444 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
SGCE-203ENST00000425444 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
SGCE-203ENST00000425444 USP19O94966 1318 aa18.13■□□□□ 0.49
SGCE-203ENST00000425444 TOM1L2Q6ZVM7 507 aa18.12■□□□□ 0.49
SGCE-203ENST00000425444 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
SGCE-203ENST00000425444 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
SGCE-203ENST00000425444 NLRP13Q86W25 1043 aa18.11■□□□□ 0.49
SGCE-203ENST00000425444 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
SGCE-203ENST00000425444 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
SGCE-203ENST00000425444 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
SGCE-203ENST00000425444 BCL9O00512 1426 aa18.08■□□□□ 0.49
SGCE-203ENST00000425444 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
SGCE-203ENST00000425444 SHANK3Q9BYB0 1731 aa18.08■□□□□ 0.48
SGCE-203ENST00000425444 PPIP5K1Q6PFW1 1433 aa18.07■□□□□ 0.48
SGCE-203ENST00000425444 CDCA7Q9BWT1 371 aaPredicted RBP18.07■□□□□ 0.48
SGCE-203ENST00000425444 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
SGCE-203ENST00000425444 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
SGCE-203ENST00000425444 CARD11Q9BXL7 1154 aa18.06■□□□□ 0.48
SGCE-203ENST00000425444 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
SGCE-203ENST00000425444 POLD1P28340 1107 aa18.03■□□□□ 0.48
SGCE-203ENST00000425444 WDR17Q8IZU2 1322 aa18.02■□□□□ 0.48
SGCE-203ENST00000425444 EXOC5O00471 708 aa18.02■□□□□ 0.48
SGCE-203ENST00000425444 WNK3Q9BYP7 1800 aa18.02■□□□□ 0.47
SGCE-203ENST00000425444 KAT6BQ8WYB5 2073 aa18.02■□□□□ 0.47
SGCE-203ENST00000425444 HSPA6P17066 643 aa18.01■□□□□ 0.47
SGCE-203ENST00000425444 NLRP6P59044 892 aa18.01■□□□□ 0.47
SGCE-203ENST00000425444 GRIN3BO60391 1043 aa18■□□□□ 0.47
SGCE-203ENST00000425444 ZNF827Q17R98 1081 aa18■□□□□ 0.47
SGCE-203ENST00000425444 NLGN2Q8NFZ4 835 aa18■□□□□ 0.47
SGCE-203ENST00000425444 ACSBG1Q96GR2 724 aa18■□□□□ 0.47
SGCE-203ENST00000425444 CABP1Q9NZU7 370 aa18■□□□□ 0.47
SGCE-203ENST00000425444 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
SGCE-203ENST00000425444 CSB-PGBD3P0DP91 1061 aa17.99■□□□□ 0.47
SGCE-203ENST00000425444 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
SGCE-203ENST00000425444 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
SGCE-203ENST00000425444 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
SGCE-203ENST00000425444 CARD10Q9BWT7 1032 aa17.98■□□□□ 0.47
SGCE-203ENST00000425444 GPBP1L1Q9HC44 474 aaPredicted RBP17.98■□□□□ 0.47
SGCE-203ENST00000425444 PAPPAQ13219 1627 aa17.98■□□□□ 0.47
SGCE-203ENST00000425444 YBX3P16989 372 aaKnown RBP eCLIP17.97■□□□□ 0.47
SGCE-203ENST00000425444 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
SGCE-203ENST00000425444 COL18A1P39060 1754 aa17.96■□□□□ 0.47
SGCE-203ENST00000425444 USP6P35125 1406 aa17.96■□□□□ 0.47
SGCE-203ENST00000425444 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
SGCE-203ENST00000425444 LRRC4BQ9NT99 713 aa17.95■□□□□ 0.46
SGCE-203ENST00000425444 NHSQ6T4R5 1651 aa17.95■□□□□ 0.46
SGCE-203ENST00000425444 SLIT3O75094 1523 aa17.94■□□□□ 0.46
SGCE-203ENST00000425444 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
SGCE-203ENST00000425444 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
SGCE-203ENST00000425444 CPSF1Q10570 1443 aaKnown RBP17.92■□□□□ 0.46
SGCE-203ENST00000425444 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
SGCE-203ENST00000425444 PCNTO95613 3336 aa17.92■□□□□ 0.46
SGCE-203ENST00000425444 RGPD5Q99666 1765 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 SOX12O15370 315 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 ARHGEF25Q86VW2 580 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 PNPLA7Q6ZV29 1317 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 BTAF1O14981 1849 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
SGCE-203ENST00000425444 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
SGCE-203ENST00000425444 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
SGCE-203ENST00000425444 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
SGCE-203ENST00000425444 TMC1Q8TDI8 760 aa17.88■□□□□ 0.45
SGCE-203ENST00000425444 COL24A1Q17RW2 1714 aa17.88■□□□□ 0.45
SGCE-203ENST00000425444 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
SGCE-203ENST00000425444 ST20-MTHFSA0A0A6YYL1 179 aa17.87■□□□□ 0.45
SGCE-203ENST00000425444 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
SGCE-203ENST00000425444 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
SGCE-203ENST00000425444 SLC27A3Q5K4L6 730 aa17.86■□□□□ 0.45
SGCE-203ENST00000425444 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
SGCE-203ENST00000425444 ABCC6O95255 1503 aa17.86■□□□□ 0.45
SGCE-203ENST00000425444 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
SGCE-203ENST00000425444 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
SGCE-203ENST00000425444 CCER1Q8TC90 406 aaPredicted RBP17.85■□□□□ 0.45
SGCE-203ENST00000425444 USP47Q96K76 1375 aa17.85■□□□□ 0.45
SGCE-203ENST00000425444 TIMELESSQ9UNS1 1208 aa17.85■□□□□ 0.45
SGCE-203ENST00000425444 MSH5O43196 834 aa17.84■□□□□ 0.45
SGCE-203ENST00000425444 KCNQ4P56696 695 aa17.84■□□□□ 0.45
SGCE-203ENST00000425444 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
SGCE-203ENST00000425444 ADCY9O60503 1353 aa17.83■□□□□ 0.45
SGCE-203ENST00000425444 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms