RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	NSD2	O96028	1365 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	QRICH2	Q9H0J4	1663 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	NGEF	Q8N5V2	710 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	NGDN	Q8NEJ9	315 aa	Known RBP	13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	CAMKK2	Q96RR4	588 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	CARD14	Q9BXL6	1004 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	SPON1	Q9HCB6	807 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	ITSN1	Q15811	1721 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	TULP4	Q9NRJ4	1543 aa		13.32	□□□□□ -0.28
POLR1A-204	ENST00000424089	WDR43	Q15061	677 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
POLR1A-204	ENST00000424089	RNF123	Q5XPI4	1314 aa		13.31	□□□□□ -0.28
POLR1A-204	ENST00000424089	STRN4	Q9NRL3	753 aa		13.3	□□□□□ -0.28
POLR1A-204	ENST00000424089	CGNL1	Q0VF96	1302 aa		13.3	□□□□□ -0.28
POLR1A-204	ENST00000424089	SPATA31A1	Q5TZJ5	1347 aa		13.3	□□□□□ -0.28
POLR1A-204	ENST00000424089	RREB1	Q92766	1687 aa		13.3	□□□□□ -0.28
POLR1A-204	ENST00000424089	ANKRD36B	Q8N2N9	1353 aa		13.3	□□□□□ -0.28
POLR1A-204	ENST00000424089	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.29	□□□□□ -0.28
POLR1A-204	ENST00000424089	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.29	□□□□□ -0.28
POLR1A-204	ENST00000424089	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.29	□□□□□ -0.28
POLR1A-204	ENST00000424089	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	NUP188	Q5SRE5	1749 aa		13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	KCNQ2	O43526	872 aa		13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	EVA1C	P58658	441 aa		13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	SLC12A5	Q9H2X9	1139 aa		13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	PPP4R2	Q9NY27	417 aa		13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	POLR3A	O14802	1390 aa	Predicted RBP	13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	KIAA0232	Q92628	1395 aa		13.28	□□□□□ -0.28
POLR1A-204	ENST00000424089	WASL	O00401	505 aa	Predicted RBP	13.27	□□□□□ -0.29
POLR1A-204	ENST00000424089	USP35	Q9P2H5	1018 aa		13.27	□□□□□ -0.29
POLR1A-204	ENST00000424089	ADAMTS8	Q9UP79	889 aa		13.27	□□□□□ -0.29
POLR1A-204	ENST00000424089	NSD3	Q9BZ95	1437 aa		13.27	□□□□□ -0.29
POLR1A-204	ENST00000424089	ATP7B	P35670	1465 aa		13.27	□□□□□ -0.29
POLR1A-204	ENST00000424089	CHRNA2	Q15822	529 aa		13.26	□□□□□ -0.29
POLR1A-204	ENST00000424089	MORC1	Q86VD1	984 aa		13.26	□□□□□ -0.29
POLR1A-204	ENST00000424089	PRR36	Q9H6K5	1346 aa		13.26	□□□□□ -0.29
POLR1A-204	ENST00000424089	TERF2IP	Q9NYB0	399 aa		13.26	□□□□□ -0.29
POLR1A-204	ENST00000424089	C1QTNF8	P60827	252 aa		13.25	□□□□□ -0.29
POLR1A-204	ENST00000424089	BARGIN	Q6ZT62	677 aa		13.25	□□□□□ -0.29
POLR1A-204	ENST00000424089	ZC3H6	P61129	1189 aa	Known RBP	13.24	□□□□□ -0.29
POLR1A-204	ENST00000424089	SRPK2	P78362	688 aa	Known RBP	13.24	□□□□□ -0.29
POLR1A-204	ENST00000424089	SSH2	Q76I76	1423 aa		13.23	□□□□□ -0.29
POLR1A-204	ENST00000424089	NCBP3	Q53F19	620 aa	Known RBP	13.23	□□□□□ -0.29
POLR1A-204	ENST00000424089	CFAP53	Q96M91	514 aa		13.23	□□□□□ -0.29
POLR1A-204	ENST00000424089	CABP2	Q9NPB3	220 aa		13.23	□□□□□ -0.29
POLR1A-204	ENST00000424089	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.22	□□□□□ -0.29
POLR1A-204	ENST00000424089	TCP11L2	Q8N4U5	519 aa		13.22	□□□□□ -0.29
POLR1A-204	ENST00000424089	NUDT16	Q96DE0	195 aa	Known RBP	13.21	□□□□□ -0.29
POLR1A-204	ENST00000424089	CDK19	Q9BWU1	502 aa		13.21	□□□□□ -0.29
POLR1A-204	ENST00000424089	THRAP3	Q9Y2W1	955 aa	Known RBP	13.21	□□□□□ -0.29
POLR1A-204	ENST00000424089	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.2	□□□□□ -0.3
POLR1A-204	ENST00000424089	RGPD4	Q7Z3J3	1758 aa		13.2	□□□□□ -0.3
POLR1A-204	ENST00000424089	PARP4	Q9UKK3	1724 aa	Known RBP	13.2	□□□□□ -0.3
POLR1A-204	ENST00000424089	NUTM2G	Q5VZR2	741 aa		13.2	□□□□□ -0.3
POLR1A-204	ENST00000424089	RCAN3	Q9UKA8	241 aa		13.2	□□□□□ -0.3
POLR1A-204	ENST00000424089	NRK	Q7Z2Y5	1582 aa		13.2	□□□□□ -0.3
POLR1A-204	ENST00000424089	LARP1	Q6PKG0	1096 aa	Known RBP	13.19	□□□□□ -0.3
POLR1A-204	ENST00000424089	CAMTA1	Q9Y6Y1	1673 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	ZNF521	Q96K83	1311 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	ABTB2	Q8N961	1025 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	OVOS2	A0A0G2JMS6	1433 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	OVOS2	A0A0J9YW53	1432 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	OVOS2	Q6IE36	1432 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089		A0A1W2PP64	1363 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	CPD	O75976	1380 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	TOPAZ1	Q8N9V7	1692 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	LMO7	Q8WWI1	1683 aa		13.18	□□□□□ -0.3
POLR1A-204	ENST00000424089	GOLGA2	Q08379	1002 aa		13.17	□□□□□ -0.3
POLR1A-204	ENST00000424089	ACE	P12821	1306 aa		13.16	□□□□□ -0.3
POLR1A-204	ENST00000424089	SBF2	Q86WG5	1849 aa		13.16	□□□□□ -0.3
POLR1A-204	ENST00000424089	IRX6	P78412	446 aa	Predicted RBP	13.16	□□□□□ -0.3
POLR1A-204	ENST00000424089	CCDC61	Q9Y6R9	512 aa		13.16	□□□□□ -0.3
POLR1A-204	ENST00000424089	PLSCR1	O15162	318 aa		13.15	□□□□□ -0.3
POLR1A-204	ENST00000424089	ZBTB7A	O95365	584 aa		13.15	□□□□□ -0.3
POLR1A-204	ENST00000424089	MTHFS	P49914	203 aa		13.15	□□□□□ -0.3
POLR1A-204	ENST00000424089	RRP1	P56182	461 aa	Known RBP	13.15	□□□□□ -0.3
POLR1A-204	ENST00000424089	CRB1	P82279	1406 aa		13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	RUNDC1	Q96C34	613 aa		13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	CABP1	Q9NZU7	370 aa		13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	SALL2	Q9Y467	1007 aa	Predicted RBP	13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	COL5A2	P05997	1499 aa	Predicted RBP	13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	CD163L1	Q9NR16	1453 aa		13.14	□□□□□ -0.31
POLR1A-204	ENST00000424089	USP19	O94966	1318 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	AKAP12	Q02952	1782 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	CASZ1	Q86V15	1759 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	PLEKHG3	A1L390	1219 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	FYB1	O15117	783 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	GIGYF1	O75420	1035 aa	Predicted RBP	13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	DDB1	Q16531	1140 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	TRMT2A	Q8IZ69	625 aa	Known RBP	13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	CDCA7L	Q96GN5	454 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	PEAK1	Q9H792	1746 aa		13.13	□□□□□ -0.31
POLR1A-204	ENST00000424089	ZBTB7C	A1YPR0	619 aa		13.12	□□□□□ -0.31
POLR1A-204	ENST00000424089		E9PSI1	815 aa		13.12	□□□□□ -0.31
POLR1A-204	ENST00000424089	APAF1	O14727	1248 aa		13.12	□□□□□ -0.31
POLR1A-204	ENST00000424089	GC	P02774	474 aa		13.12	□□□□□ -0.31
POLR1A-204	ENST00000424089	SLFN5	Q08AF3	891 aa		13.12	□□□□□ -0.31
POLR1A-204	ENST00000424089	CCDC27	Q2M243	656 aa		13.12	□□□□□ -0.31
POLR1A-204	ENST00000424089	ZNF692	Q9BU19	519 aa	Predicted RBP	13.12	□□□□□ -0.31

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