RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 POLR3EQ9NVU0 708 aa5.51□□□□□ -1.53
PMS1-209ENST00000424059 NR3C2P08235 984 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 PURBQ96QR8 312 aaKnown RBP5.5□□□□□ -1.53
PMS1-209ENST00000424059 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.5□□□□□ -1.53
PMS1-209ENST00000424059 FKBPLQ9UIM3 349 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 FSHRP23945 695 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 CCDC116Q8IYX3 515 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 ITPKCQ96DU7 683 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 PGPEP1Q9NXJ5 209 aa5.5□□□□□ -1.53
PMS1-209ENST00000424059 VSIG8P0DPA2 414 aa5.49□□□□□ -1.53
PMS1-209ENST00000424059 DHX9Q08211 1270 aaKnown RBP5.49□□□□□ -1.53
PMS1-209ENST00000424059 ERFEQ4G0M1 354 aa5.49□□□□□ -1.53
PMS1-209ENST00000424059 ARHGAP9Q9BRR9 750 aa5.49□□□□□ -1.53
PMS1-209ENST00000424059 ZFAND3Q9H8U3 227 aa5.49□□□□□ -1.53
PMS1-209ENST00000424059 CTDSPL2Q05D32 466 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 LINC00528Q8N1L1 170 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 TRIM52Q96A61 297 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 SLC10A4Q96EP9 437 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 TSEN34Q9BSV6 310 aaKnown RBP5.48□□□□□ -1.53
PMS1-209ENST00000424059 MAGEB6P1A0A0J9YX57 407 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 PTK2Q05397 1052 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 GOPCQ9HD26 462 aa5.48□□□□□ -1.53
PMS1-209ENST00000424059 GMPRP36959 345 aa5.47□□□□□ -1.53
PMS1-209ENST00000424059 MAN1A2O60476 641 aa5.47□□□□□ -1.53
PMS1-209ENST00000424059 BMP2P12643 396 aa5.47□□□□□ -1.53
PMS1-209ENST00000424059 SOS2Q07890 1332 aaPredicted RBP5.46□□□□□ -1.54
PMS1-209ENST00000424059 ZBTB33Q86T24 672 aa5.46□□□□□ -1.54
PMS1-209ENST00000424059 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
PMS1-209ENST00000424059 CARD14Q9BXL6 1004 aa5.46□□□□□ -1.54
PMS1-209ENST00000424059 FAM117AQ9C073 453 aa5.46□□□□□ -1.54
PMS1-209ENST00000424059 C6orf118Q5T5N4 469 aa5.45□□□□□ -1.54
PMS1-209ENST00000424059 PPP1R26Q5T8A7 1209 aaPredicted RBP5.45□□□□□ -1.54
PMS1-209ENST00000424059 Q6ZVU0 165 aa5.45□□□□□ -1.54
PMS1-209ENST00000424059 ZSCAN1Q8NBB4 408 aa5.45□□□□□ -1.54
PMS1-209ENST00000424059 GPBP1L1Q9HC44 474 aaPredicted RBP5.45□□□□□ -1.54
PMS1-209ENST00000424059 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.45□□□□□ -1.54
PMS1-209ENST00000424059 PROCA1Q8NCQ7 364 aaPredicted RBP5.45□□□□□ -1.54
PMS1-209ENST00000424059 KCTD15Q96SI1 283 aaPredicted RBP5.45□□□□□ -1.54
PMS1-209ENST00000424059 AP1G2O75843 785 aa5.44□□□□□ -1.54
PMS1-209ENST00000424059 NR6A1Q15406 480 aa5.44□□□□□ -1.54
PMS1-209ENST00000424059 NBPF20Q3BBV1 942 aa5.44□□□□□ -1.54
PMS1-209ENST00000424059 TMEM259Q4ZIN3 620 aa5.44□□□□□ -1.54
PMS1-209ENST00000424059 ERBB4Q15303 1308 aa5.43□□□□□ -1.54
PMS1-209ENST00000424059 USP17L8P0C7I0 530 aa5.43□□□□□ -1.54
PMS1-209ENST00000424059 CCDC125Q86Z20 511 aa5.43□□□□□ -1.54
PMS1-209ENST00000424059 PCMTD1Q96MG8 357 aaPredicted RBP5.43□□□□□ -1.54
PMS1-209ENST00000424059 ATP1B4Q9UN42 357 aaPredicted RBP5.43□□□□□ -1.54
PMS1-209ENST00000424059 SPINT1O43278 529 aa5.43□□□□□ -1.54
PMS1-209ENST00000424059 TTLL8A6PVC2 850 aa5.42□□□□□ -1.54
PMS1-209ENST00000424059 PPFIA3O75145 1194 aa5.42□□□□□ -1.54
PMS1-209ENST00000424059 VEGFBP49765 207 aa5.42□□□□□ -1.54
PMS1-209ENST00000424059 INTS6LQ5JSJ4 861 aaKnown RBP5.42□□□□□ -1.54
PMS1-209ENST00000424059 SOBPA7XYQ1 873 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 SOCS7O14512 581 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 RFC5P40937 340 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 SEPT12Q8IYM1 358 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 ADAM32Q8TC27 787 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 DNMT3LQ9UJW3 386 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
PMS1-209ENST00000424059 FBXO31Q5XUX0 539 aaPredicted RBP5.41□□□□□ -1.54
PMS1-209ENST00000424059 ZNF592Q92610 1267 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 OCSTAMPQ9BR26 566 aa5.41□□□□□ -1.54
PMS1-209ENST00000424059 ESPNB1AK53 854 aa5.4□□□□□ -1.54
PMS1-209ENST00000424059 MCCD1P59942 119 aaPredicted RBP5.4□□□□□ -1.55
PMS1-209ENST00000424059 DZIP3Q86Y13 1208 aaKnown RBP5.4□□□□□ -1.55
PMS1-209ENST00000424059 NANOS1Q8WY41 292 aaKnown RBP5.4□□□□□ -1.55
PMS1-209ENST00000424059 CBLBQ13191 982 aa5.39□□□□□ -1.55
PMS1-209ENST00000424059 ADH1AP07327 375 aa5.38□□□□□ -1.55
PMS1-209ENST00000424059 HMX1Q9NP08 348 aaPredicted RBP5.38□□□□□ -1.55
PMS1-209ENST00000424059 PTSQ03393 145 aa5.37□□□□□ -1.55
PMS1-209ENST00000424059 BANK1Q8NDB2 785 aa5.37□□□□□ -1.55
PMS1-209ENST00000424059 TRIM34Q9BYJ4 488 aa5.37□□□□□ -1.55
PMS1-209ENST00000424059 SLC35F4A4IF30 521 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 ZBBXA8MT70 800 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 APBB1O00213 710 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 EPS8L1Q8TE68 723 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 PTGIRP43119 386 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 NEUROD2Q15784 382 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 CCDC155Q8N6L0 562 aa5.36□□□□□ -1.55
PMS1-209ENST00000424059 ZNF784Q8NCA9 323 aaPredicted RBP5.36□□□□□ -1.55
PMS1-209ENST00000424059 ERVH48-1M5A8F1 160 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 RNF20Q5VTR2 975 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 ZNF330Q9Y3S2 320 aaPredicted RBP5.35□□□□□ -1.55
PMS1-209ENST00000424059 LILRA1O75019 489 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 RELBQ01201 579 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 RNF217Q8TC41 542 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 AGBL1Q96MI9 1066 aa5.35□□□□□ -1.55
PMS1-209ENST00000424059 POLMQ9NP87 494 aaPredicted RBP5.35□□□□□ -1.55
PMS1-209ENST00000424059 FIGNL2A6NMB9 653 aa5.34□□□□□ -1.55
PMS1-209ENST00000424059 GPC1P35052 558 aa5.34□□□□□ -1.55
PMS1-209ENST00000424059 GJD4Q96KN9 370 aaPredicted RBP5.34□□□□□ -1.55
PMS1-209ENST00000424059 ITGA6P23229 1130 aa5.33□□□□□ -1.56
PMS1-209ENST00000424059 CTSOP43234 321 aaPredicted RBP5.33□□□□□ -1.56
PMS1-209ENST00000424059 NR1H3Q13133 447 aa5.33□□□□□ -1.56
PMS1-209ENST00000424059 SV2AQ7L0J3 742 aa5.33□□□□□ -1.56
PMS1-209ENST00000424059 GMCL1Q96IK5 515 aa5.33□□□□□ -1.56
PMS1-209ENST00000424059 INSM2Q96T92 566 aaPredicted RBP5.33□□□□□ -1.56
PMS1-209ENST00000424059 TMPRSS4Q9NRS4 437 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms