RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
ECHDC3-203ENST00000422887 PARD3Q8TEW0 1356 aa13.56□□□□□ -0.24
ECHDC3-203ENST00000422887 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
ECHDC3-203ENST00000422887 ARHGEF25Q86VW2 580 aa13.55□□□□□ -0.24
ECHDC3-203ENST00000422887 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
ECHDC3-203ENST00000422887 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
ECHDC3-203ENST00000422887 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
ECHDC3-203ENST00000422887 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
ECHDC3-203ENST00000422887 FLT4P35916 1363 aa13.54□□□□□ -0.24
ECHDC3-203ENST00000422887 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
ECHDC3-203ENST00000422887 SOX12O15370 315 aa13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 RALBP1Q15311 655 aa13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 NCAPD2Q15021 1401 aa13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 COL3A1P02461 1466 aaPredicted RBP13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
ECHDC3-203ENST00000422887 FAM83GA6ND36 823 aa13.52□□□□□ -0.25
ECHDC3-203ENST00000422887 AFF2P51816 1311 aa13.51□□□□□ -0.25
ECHDC3-203ENST00000422887 C8orf37Q96NL8 207 aa13.51□□□□□ -0.25
ECHDC3-203ENST00000422887 AMPHP49418 695 aa13.5□□□□□ -0.25
ECHDC3-203ENST00000422887 NGLY1Q96IV0 654 aa13.5□□□□□ -0.25
ECHDC3-203ENST00000422887 INSRP06213 1382 aa13.49□□□□□ -0.25
ECHDC3-203ENST00000422887 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
ECHDC3-203ENST00000422887 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
ECHDC3-203ENST00000422887 IP6K1Q92551 441 aa13.49□□□□□ -0.25
ECHDC3-203ENST00000422887 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
ECHDC3-203ENST00000422887 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 ANP32CO43423 234 aa13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 HOXC9P31274 260 aa13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
ECHDC3-203ENST00000422887 ERBB3P21860 1342 aa13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 FBLN1P23142 703 aa13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 POTEAQ6S8J7 498 aa13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 UNC5CLQ8IV45 518 aa13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
ECHDC3-203ENST00000422887 PPP2R1AP30153 589 aa13.46□□□□□ -0.25
ECHDC3-203ENST00000422887 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
ECHDC3-203ENST00000422887 USP21Q9UK80 565 aa13.46□□□□□ -0.25
ECHDC3-203ENST00000422887 RGS12O14924 1447 aa13.46□□□□□ -0.26
ECHDC3-203ENST00000422887 CRB1P82279 1406 aa13.46□□□□□ -0.26
ECHDC3-203ENST00000422887 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
ECHDC3-203ENST00000422887 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
ECHDC3-203ENST00000422887 MTHFSP49914 203 aa13.45□□□□□ -0.26
ECHDC3-203ENST00000422887 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
ECHDC3-203ENST00000422887 EVA1CP58658 441 aa13.44□□□□□ -0.26
ECHDC3-203ENST00000422887 VPS72Q15906 364 aa13.44□□□□□ -0.26
ECHDC3-203ENST00000422887 TRPC5Q9UL62 973 aaPredicted RBP13.44□□□□□ -0.26
ECHDC3-203ENST00000422887 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
ECHDC3-203ENST00000422887 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
ECHDC3-203ENST00000422887 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
ECHDC3-203ENST00000422887 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
ECHDC3-203ENST00000422887 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
ECHDC3-203ENST00000422887 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
ECHDC3-203ENST00000422887 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
ECHDC3-203ENST00000422887 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
ECHDC3-203ENST00000422887 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
ECHDC3-203ENST00000422887 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
ECHDC3-203ENST00000422887 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
ECHDC3-203ENST00000422887 ADAMTS7Q9UKP4 1686 aa13.41□□□□□ -0.26
ECHDC3-203ENST00000422887 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
ECHDC3-203ENST00000422887 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
ECHDC3-203ENST00000422887 ITGB4P16144 1822 aa13.41□□□□□ -0.26
ECHDC3-203ENST00000422887 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
ECHDC3-203ENST00000422887 TOM1L2Q6ZVM7 507 aa13.4□□□□□ -0.26
ECHDC3-203ENST00000422887 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
ECHDC3-203ENST00000422887 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 SCN11AQ9UI33 1791 aa13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 MEGF6O75095 1541 aa13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
ECHDC3-203ENST00000422887 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 CDCA7Q9BWT1 371 aaPredicted RBP13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
ECHDC3-203ENST00000422887 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 KDRP35968 1356 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 IL13P35225 146 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
ECHDC3-203ENST00000422887 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
ECHDC3-203ENST00000422887 RXRBP28702 533 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms