RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 YTHDC2Q9H6S0 1430 aaKnown RBP10.53□□□□□ -0.72
RFX3-205ENST00000420720 HSPA6P17066 643 aa10.53□□□□□ -0.72
RFX3-205ENST00000420720 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
RFX3-205ENST00000420720 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
RFX3-205ENST00000420720 FHDC1Q9C0D6 1143 aaPredicted RBP10.53□□□□□ -0.72
RFX3-205ENST00000420720 SPATA31A3Q5VYP0 1347 aa10.53□□□□□ -0.72
RFX3-205ENST00000420720 PRELPP51888 382 aa10.52□□□□□ -0.73
RFX3-205ENST00000420720 SAFB2Q14151 953 aaKnown RBP eCLIP10.52□□□□□ -0.73
RFX3-205ENST00000420720 ABCA3Q99758 1704 aa10.52□□□□□ -0.73
RFX3-205ENST00000420720 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.73
RFX3-205ENST00000420720 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
RFX3-205ENST00000420720 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
RFX3-205ENST00000420720 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
RFX3-205ENST00000420720 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
RFX3-205ENST00000420720 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
RFX3-205ENST00000420720 DLC1Q96QB1 1528 aa10.5□□□□□ -0.73
RFX3-205ENST00000420720 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
RFX3-205ENST00000420720 PSME1Q06323 249 aa10.5□□□□□ -0.73
RFX3-205ENST00000420720 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
RFX3-205ENST00000420720 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
RFX3-205ENST00000420720 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
RFX3-205ENST00000420720 ZBTB7AO95365 584 aa10.49□□□□□ -0.73
RFX3-205ENST00000420720 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
RFX3-205ENST00000420720 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
RFX3-205ENST00000420720 POGKQ9P215 609 aa10.49□□□□□ -0.73
RFX3-205ENST00000420720 ACIN1Q9UKV3 1341 aaKnown RBP10.49□□□□□ -0.73
RFX3-205ENST00000420720 FAM83GA6ND36 823 aa10.48□□□□□ -0.73
RFX3-205ENST00000420720 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
RFX3-205ENST00000420720 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
RFX3-205ENST00000420720 TRIM35Q9UPQ4 493 aa10.47□□□□□ -0.73
RFX3-205ENST00000420720 RAB3GAP2Q9H2M9 1393 aa10.47□□□□□ -0.73
RFX3-205ENST00000420720 NRXN1Q9ULB1 1477 aa10.47□□□□□ -0.73
RFX3-205ENST00000420720 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.73
RFX3-205ENST00000420720 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
RFX3-205ENST00000420720 FAM196AQ6ZSG2 479 aa10.46□□□□□ -0.73
RFX3-205ENST00000420720 HIRIP3Q9BW71 556 aaPredicted RBP10.46□□□□□ -0.73
RFX3-205ENST00000420720 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
RFX3-205ENST00000420720 SPATA31A5Q5VU36 1347 aa10.46□□□□□ -0.73
RFX3-205ENST00000420720 SPATA31A7Q8IWB4 1347 aa10.46□□□□□ -0.73
RFX3-205ENST00000420720 TNS3Q68CZ2 1445 aa10.46□□□□□ -0.74
RFX3-205ENST00000420720 IFT172Q9UG01 1749 aa10.46□□□□□ -0.74
RFX3-205ENST00000420720 KNDC1Q76NI1 1749 aa10.45□□□□□ -0.74
RFX3-205ENST00000420720 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
RFX3-205ENST00000420720 SBNO1A3KN83 1393 aa10.45□□□□□ -0.74
RFX3-205ENST00000420720 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
RFX3-205ENST00000420720 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
RFX3-205ENST00000420720 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
RFX3-205ENST00000420720 DNAJC5GQ8N7S2 189 aa10.44□□□□□ -0.74
RFX3-205ENST00000420720 PCNTO95613 3336 aa10.43□□□□□ -0.74
RFX3-205ENST00000420720 PYGBP11216 843 aa10.43□□□□□ -0.74
RFX3-205ENST00000420720 BTG4Q9NY30 223 aa10.43□□□□□ -0.74
RFX3-205ENST00000420720 KIF1AQ12756 1690 aa10.43□□□□□ -0.74
RFX3-205ENST00000420720 ATP10DQ9P241 1426 aa10.42□□□□□ -0.74
RFX3-205ENST00000420720 ARHGEF10O15013 1369 aa10.42□□□□□ -0.74
RFX3-205ENST00000420720 PRR36Q9H6K5 1346 aa10.42□□□□□ -0.74
RFX3-205ENST00000420720 WASLO00401 505 aaPredicted RBP10.42□□□□□ -0.74
RFX3-205ENST00000420720 ANKARQ7Z5J8 1434 aa10.41□□□□□ -0.74
RFX3-205ENST00000420720 MAP3K5Q99683 1374 aa10.41□□□□□ -0.74
RFX3-205ENST00000420720 GPR162Q16538 588 aa10.41□□□□□ -0.74
RFX3-205ENST00000420720 NGDNQ8NEJ9 315 aaKnown RBP10.41□□□□□ -0.74
RFX3-205ENST00000420720 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
RFX3-205ENST00000420720 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
RFX3-205ENST00000420720 ADGRB1O14514 1584 aa10.4□□□□□ -0.74
RFX3-205ENST00000420720 RGPD3A6NKT7 1758 aaPredicted RBP10.4□□□□□ -0.74
RFX3-205ENST00000420720 COL14A1Q05707 1796 aaKnown RBP10.4□□□□□ -0.74
RFX3-205ENST00000420720 RGPD4Q7Z3J3 1758 aa10.4□□□□□ -0.74
RFX3-205ENST00000420720 POTEMA6NI47 508 aa10.4□□□□□ -0.74
RFX3-205ENST00000420720 IER5LQ5T953 404 aa10.4□□□□□ -0.74
RFX3-205ENST00000420720 MAMSTRQ6ZN01 415 aa10.4□□□□□ -0.74
RFX3-205ENST00000420720 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
RFX3-205ENST00000420720 DCAF8Q5TAQ9 597 aa10.38□□□□□ -0.75
RFX3-205ENST00000420720 NUDT16Q96DE0 195 aaKnown RBP10.38□□□□□ -0.75
RFX3-205ENST00000420720 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
RFX3-205ENST00000420720 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
RFX3-205ENST00000420720 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
RFX3-205ENST00000420720 SPATA31A1Q5TZJ5 1347 aa10.37□□□□□ -0.75
RFX3-205ENST00000420720 ARXQ96QS3 562 aa10.37□□□□□ -0.75
RFX3-205ENST00000420720 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
RFX3-205ENST00000420720 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
RFX3-205ENST00000420720 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
RFX3-205ENST00000420720 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
RFX3-205ENST00000420720 TULP4Q9NRJ4 1543 aa10.36□□□□□ -0.75
RFX3-205ENST00000420720 RGPD8O14715 1765 aaPredicted RBP10.36□□□□□ -0.75
RFX3-205ENST00000420720 SEC24BO95487 1268 aa10.35□□□□□ -0.75
RFX3-205ENST00000420720 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
RFX3-205ENST00000420720 NUTM2GQ5VZR2 741 aa10.35□□□□□ -0.75
RFX3-205ENST00000420720 MTFR1LQ9H019 292 aa10.35□□□□□ -0.75
RFX3-205ENST00000420720 ADCY9O60503 1353 aa10.35□□□□□ -0.75
RFX3-205ENST00000420720 APLP1P51693 650 aa10.34□□□□□ -0.75
RFX3-205ENST00000420720 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
RFX3-205ENST00000420720 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
RFX3-205ENST00000420720 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
RFX3-205ENST00000420720 PLSCR1O15162 318 aa10.33□□□□□ -0.76
RFX3-205ENST00000420720 YBX3P16989 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
RFX3-205ENST00000420720 ZC3H6P61129 1189 aaKnown RBP10.33□□□□□ -0.76
RFX3-205ENST00000420720 NBPF1Q3BBV0 1214 aa10.33□□□□□ -0.76
RFX3-205ENST00000420720 PTF1AQ7RTS3 328 aa10.33□□□□□ -0.76
RFX3-205ENST00000420720 ACEP12821 1306 aa10.33□□□□□ -0.76
RFX3-205ENST00000420720 ATP7BP35670 1465 aa10.32□□□□□ -0.76
RFX3-205ENST00000420720 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms