RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 MST1RQ04912 1400 aa6.91□□□□□ -1.3
PMS1-207ENST00000420421 IQSEC2Q5JU85 1478 aa6.91□□□□□ -1.3
PMS1-207ENST00000420421 LTBP4Q8N2S1 1624 aa6.9□□□□□ -1.3
PMS1-207ENST00000420421 TRPM3Q9HCF6 1732 aaPredicted RBP6.9□□□□□ -1.3
PMS1-207ENST00000420421 PMFBP1Q8TBY8 1022 aa6.9□□□□□ -1.3
PMS1-207ENST00000420421 CFAP53Q96M91 514 aa6.9□□□□□ -1.3
PMS1-207ENST00000420421 NPHP3Q7Z494 1330 aa6.9□□□□□ -1.3
PMS1-207ENST00000420421 KIF24Q5T7B8 1368 aa6.9□□□□□ -1.31
PMS1-207ENST00000420421 NUTM2FA1L443 756 aa6.89□□□□□ -1.31
PMS1-207ENST00000420421 C1QBPQ07021 282 aaKnown RBP6.89□□□□□ -1.31
PMS1-207ENST00000420421 PNISRQ8TF01 805 aaKnown RBP6.89□□□□□ -1.31
PMS1-207ENST00000420421 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
PMS1-207ENST00000420421 ALS2Q96Q42 1657 aa6.89□□□□□ -1.31
PMS1-207ENST00000420421 PIK3C2AO00443 1686 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 NHSL1Q5SYE7 1610 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 OVOS2A0A0J9YW53 1432 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 OVOS2Q6IE36 1432 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 SBNO1A3KN83 1393 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
PMS1-207ENST00000420421 NGEFQ8N5V2 710 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 KCNH5Q8NCM2 988 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 PNNQ9H307 717 aaKnown RBP6.88□□□□□ -1.31
PMS1-207ENST00000420421 GGNBP2Q9H3C7 697 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 SLAIN2Q9P270 581 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 NUDCQ9Y266 331 aa6.88□□□□□ -1.31
PMS1-207ENST00000420421 MARF1Q9Y4F3 1742 aaKnown RBP6.87□□□□□ -1.31
PMS1-207ENST00000420421 PHRF1Q9P1Y6 1649 aaKnown RBP6.87□□□□□ -1.31
PMS1-207ENST00000420421 SMG6Q86US8 1419 aaKnown RBP6.87□□□□□ -1.31
PMS1-207ENST00000420421 PNPLA6Q8IY17 1366 aa6.87□□□□□ -1.31
PMS1-207ENST00000420421 CENPBP07199 599 aaPredicted RBP6.87□□□□□ -1.31
PMS1-207ENST00000420421 CHRM1P11229 460 aaPredicted RBP6.87□□□□□ -1.31
PMS1-207ENST00000420421 MTHFSP49914 203 aa6.87□□□□□ -1.31
PMS1-207ENST00000420421 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
PMS1-207ENST00000420421 KRT28Q7Z3Y7 464 aa6.87□□□□□ -1.31
PMS1-207ENST00000420421 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
PMS1-207ENST00000420421 RBM33Q96EV2 1170 aaKnown RBP6.87□□□□□ -1.31
PMS1-207ENST00000420421 ORAI2Q96SN7 254 aa6.87□□□□□ -1.31
PMS1-207ENST00000420421 LTN1O94822 1766 aa6.87□□□□□ -1.31
PMS1-207ENST00000420421 CDK12Q9NYV4 1490 aaPredicted RBP6.86□□□□□ -1.31
PMS1-207ENST00000420421 ARHGEF10O15013 1369 aa6.86□□□□□ -1.31
PMS1-207ENST00000420421 FOXO3O43524 673 aa6.86□□□□□ -1.31
PMS1-207ENST00000420421 NME9Q86XW9 330 aa6.86□□□□□ -1.31
PMS1-207ENST00000420421 SHPRHQ149N8 1683 aa6.86□□□□□ -1.31
PMS1-207ENST00000420421 TOM1O60784 492 aa6.85□□□□□ -1.31
PMS1-207ENST00000420421 PAK3O75914 559 aaPredicted RBP6.85□□□□□ -1.31
PMS1-207ENST00000420421 NLRP6P59044 892 aa6.85□□□□□ -1.31
PMS1-207ENST00000420421 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
PMS1-207ENST00000420421 CCDC184Q52MB2 194 aa6.85□□□□□ -1.31
PMS1-207ENST00000420421 FAM9BQ8IZU0 186 aa6.85□□□□□ -1.31
PMS1-207ENST00000420421 POLKQ9UBT6 870 aa6.85□□□□□ -1.31
PMS1-207ENST00000420421 ABCC6O95255 1503 aa6.85□□□□□ -1.31
PMS1-207ENST00000420421 RTL1A6NKG5 1358 aa6.84□□□□□ -1.31
PMS1-207ENST00000420421 AHDC1Q5TGY3 1603 aaPredicted RBP6.84□□□□□ -1.31
PMS1-207ENST00000420421 SOS2Q07890 1332 aaPredicted RBP6.84□□□□□ -1.31
PMS1-207ENST00000420421 MED1Q15648 1581 aaPredicted RBP6.84□□□□□ -1.31
PMS1-207ENST00000420421 DIAPH1O60610 1272 aaKnown RBP6.84□□□□□ -1.31
PMS1-207ENST00000420421 BRINP3Q76B58 766 aa6.84□□□□□ -1.31
PMS1-207ENST00000420421 SLIT3O75094 1523 aa6.84□□□□□ -1.31
PMS1-207ENST00000420421 PXDNQ92626 1479 aa6.84□□□□□ -1.31
PMS1-207ENST00000420421 CRYBG1Q9Y4K1 1723 aa6.84□□□□□ -1.31
PMS1-207ENST00000420421 TNS3Q68CZ2 1445 aa6.84□□□□□ -1.32
PMS1-207ENST00000420421 ROBO1Q9Y6N7 1651 aa6.84□□□□□ -1.32
PMS1-207ENST00000420421 USP19O94966 1318 aa6.83□□□□□ -1.32
PMS1-207ENST00000420421 SPATA31A3Q5VYP0 1347 aa6.83□□□□□ -1.32
PMS1-207ENST00000420421 DSG3P32926 999 aa6.83□□□□□ -1.32
PMS1-207ENST00000420421 ARHGEF1Q92888 912 aaKnown RBP6.83□□□□□ -1.32
PMS1-207ENST00000420421 COL3A1P02461 1466 aaPredicted RBP6.83□□□□□ -1.32
PMS1-207ENST00000420421 FAM208AQ9UK61 1670 aaKnown RBP6.83□□□□□ -1.32
PMS1-207ENST00000420421 BLMP54132 1417 aaPredicted RBP6.83□□□□□ -1.32
PMS1-207ENST00000420421 FLT4P35916 1363 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 ZBED9Q6R2W3 1325 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 FCHSD2O94868 740 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 NEFMP07197 916 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 TNNT2P45379 298 aaPredicted RBP6.82□□□□□ -1.32
PMS1-207ENST00000420421 PDE3BQ13370 1112 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 LRRC59Q96AG4 307 aaKnown RBP6.82□□□□□ -1.32
PMS1-207ENST00000420421 ADAMTS8Q9UP79 889 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 RGPD5Q99666 1765 aa6.82□□□□□ -1.32
PMS1-207ENST00000420421 PHLPP1O60346 1717 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 NFAT5O94916 1531 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 COL22A1Q8NFW1 1626 aaPredicted RBP6.81□□□□□ -1.32
PMS1-207ENST00000420421 GCP02774 474 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 AMPHP49418 695 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 HNRNPUQ00839 825 aaKnown RBP eCLIP6.81□□□□□ -1.32
PMS1-207ENST00000420421 IP6K1Q92551 441 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 RUNDC1Q96C34 613 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 ZMYND15Q9H091 742 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 DLG5Q8TDM6 1919 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 RGPD1P0DJD0 1748 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 PLEKHG2Q9H7P9 1386 aa6.81□□□□□ -1.32
PMS1-207ENST00000420421 MAP3K19Q56UN5 1328 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 TESPA1A2RU30 521 aaPredicted RBP6.8□□□□□ -1.32
PMS1-207ENST00000420421 IL13P35225 146 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 ARHGEF25Q86VW2 580 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 ABCA3Q99758 1704 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 RSPH6AQ9H0K4 717 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 PEAK1Q9H792 1746 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 ZRANB1Q9UGI0 708 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 EMILIN1Q9Y6C2 1016 aa6.8□□□□□ -1.32
PMS1-207ENST00000420421 CPDO75976 1380 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms