RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 ABCC11Q96J66 1382 aa12.46□□□□□ -0.42
CDV3-202ENST00000420115 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
CDV3-202ENST00000420115 TERF1P54274 439 aa12.45□□□□□ -0.42
CDV3-202ENST00000420115 MPNDQ8N594 471 aa12.45□□□□□ -0.42
CDV3-202ENST00000420115 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
CDV3-202ENST00000420115 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
CDV3-202ENST00000420115 DDX49Q9Y6V7 483 aaKnown RBP12.45□□□□□ -0.42
CDV3-202ENST00000420115 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
CDV3-202ENST00000420115 SETBP1Q9Y6X0 1596 aa12.45□□□□□ -0.42
CDV3-202ENST00000420115 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
CDV3-202ENST00000420115 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
CDV3-202ENST00000420115 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
CDV3-202ENST00000420115 CD109Q6YHK3 1445 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 QRICH2Q9H0J4 1663 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
CDV3-202ENST00000420115 TMPOP42166 694 aaKnown RBP12.44□□□□□ -0.42
CDV3-202ENST00000420115 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
CDV3-202ENST00000420115 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
CDV3-202ENST00000420115 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 NSD2O96028 1365 aa12.44□□□□□ -0.42
CDV3-202ENST00000420115 IL16Q14005 1332 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 ARHGAP31Q2M1Z3 1444 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
CDV3-202ENST00000420115 SOX12O15370 315 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
CDV3-202ENST00000420115 ZNF445P59923 1031 aa12.42□□□□□ -0.42
CDV3-202ENST00000420115 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
CDV3-202ENST00000420115 TMED8Q6PL24 325 aaPredicted RBP12.42□□□□□ -0.42
CDV3-202ENST00000420115 DYNC1I1O14576 645 aa12.41□□□□□ -0.42
CDV3-202ENST00000420115 ANKRD45Q5TZF3 282 aa12.41□□□□□ -0.42
CDV3-202ENST00000420115 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
CDV3-202ENST00000420115 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
CDV3-202ENST00000420115 KIF3BO15066 747 aa12.41□□□□□ -0.42
CDV3-202ENST00000420115 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
CDV3-202ENST00000420115 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.42
CDV3-202ENST00000420115 U2SURPO15042 1029 aaKnown RBP12.4□□□□□ -0.42
CDV3-202ENST00000420115 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
CDV3-202ENST00000420115 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
CDV3-202ENST00000420115 MED14O60244 1454 aa12.4□□□□□ -0.43
CDV3-202ENST00000420115 MTERF4Q7Z6M4 381 aaKnown RBP12.39□□□□□ -0.43
CDV3-202ENST00000420115 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
CDV3-202ENST00000420115 ZNF500O60304 480 aaPredicted RBP12.39□□□□□ -0.43
CDV3-202ENST00000420115 ZSCAN23Q3MJ62 389 aa12.39□□□□□ -0.43
CDV3-202ENST00000420115 AK9Q5TCS8 1911 aa12.39□□□□□ -0.43
CDV3-202ENST00000420115 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 PDLIM2Q96JY6 352 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 C14orf93Q9H972 538 aaKnown RBP12.38□□□□□ -0.43
CDV3-202ENST00000420115 ADGRB1O14514 1584 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 NUCB2P80303 420 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 CAVIN1Q6NZI2 390 aaKnown RBP12.38□□□□□ -0.43
CDV3-202ENST00000420115 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 EFCAB6Q5THR3 1501 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 MROH1Q8NDA8 1641 aa12.38□□□□□ -0.43
CDV3-202ENST00000420115 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
CDV3-202ENST00000420115 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
CDV3-202ENST00000420115 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
CDV3-202ENST00000420115 CDC45O75419 566 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 ZNF710Q8N1W2 664 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 LMBRD1Q9NUN5 540 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDV3-202ENST00000420115 ADGRB3O60242 1522 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 COL3A1P02461 1466 aaPredicted RBP12.37□□□□□ -0.43
CDV3-202ENST00000420115 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
CDV3-202ENST00000420115 RABEP1Q15276 862 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
CDV3-202ENST00000420115 CYP2E1P05181 493 aaPredicted RBP12.36□□□□□ -0.43
CDV3-202ENST00000420115 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
CDV3-202ENST00000420115 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
CDV3-202ENST00000420115 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
CDV3-202ENST00000420115 ARAP3Q8WWN8 1544 aa12.36□□□□□ -0.43
CDV3-202ENST00000420115 ZCCHC11Q5TAX3 1644 aaKnown RBP12.36□□□□□ -0.43
CDV3-202ENST00000420115 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
CDV3-202ENST00000420115 FANCAO15360 1455 aa12.36□□□□□ -0.43
CDV3-202ENST00000420115 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
CDV3-202ENST00000420115 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
CDV3-202ENST00000420115 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
CDV3-202ENST00000420115 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
CDV3-202ENST00000420115 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
CDV3-202ENST00000420115 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 ZKSCAN5Q9Y2L8 839 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 TULP4Q9NRJ4 1543 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 PPLO60437 1756 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 MCM5P33992 734 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
CDV3-202ENST00000420115 ERCC6L2Q5T890 1561 aa12.33□□□□□ -0.44
CDV3-202ENST00000420115 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms