RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 COG3Q96JB2 828 aa13.44□□□□□ -0.26
CTSA-205ENST00000419493 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
CTSA-205ENST00000419493 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
CTSA-205ENST00000419493 COL5A2P05997 1499 aaPredicted RBP13.43□□□□□ -0.26
CTSA-205ENST00000419493 ANKRD36BQ8N2N9 1353 aa13.43□□□□□ -0.26
CTSA-205ENST00000419493 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
CTSA-205ENST00000419493 CRB1P82279 1406 aa13.42□□□□□ -0.26
CTSA-205ENST00000419493 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
CTSA-205ENST00000419493 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
CTSA-205ENST00000419493 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
CTSA-205ENST00000419493 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
CTSA-205ENST00000419493 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
CTSA-205ENST00000419493 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.26
CTSA-205ENST00000419493 BAG6P46379 1132 aa13.39□□□□□ -0.27
CTSA-205ENST00000419493 DDB1Q16531 1140 aa13.39□□□□□ -0.27
CTSA-205ENST00000419493 NLRP2Q9NX02 1062 aa13.39□□□□□ -0.27
CTSA-205ENST00000419493 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
CTSA-205ENST00000419493 FYB1O15117 783 aa13.38□□□□□ -0.27
CTSA-205ENST00000419493 TRIM37O94972 964 aa13.38□□□□□ -0.27
CTSA-205ENST00000419493 FBLN1P23142 703 aa13.38□□□□□ -0.27
CTSA-205ENST00000419493 AMPHP49418 695 aa13.38□□□□□ -0.27
CTSA-205ENST00000419493 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
CTSA-205ENST00000419493 NFAT5O94916 1531 aa13.38□□□□□ -0.27
CTSA-205ENST00000419493 COL18A1P39060 1754 aa13.37□□□□□ -0.27
CTSA-205ENST00000419493 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
CTSA-205ENST00000419493 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
CTSA-205ENST00000419493 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
CTSA-205ENST00000419493 CARD10Q9BWT7 1032 aa13.37□□□□□ -0.27
CTSA-205ENST00000419493 OVOS2A0A0J9YW53 1432 aa13.37□□□□□ -0.27
CTSA-205ENST00000419493 OVOS2Q6IE36 1432 aa13.37□□□□□ -0.27
CTSA-205ENST00000419493 IP6K1Q92551 441 aa13.36□□□□□ -0.27
CTSA-205ENST00000419493 EXOC5O00471 708 aa13.35□□□□□ -0.27
CTSA-205ENST00000419493 EN1Q05925 392 aaPredicted RBP13.35□□□□□ -0.27
CTSA-205ENST00000419493 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
CTSA-205ENST00000419493 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
CTSA-205ENST00000419493 ERBB3P21860 1342 aa13.35□□□□□ -0.27
CTSA-205ENST00000419493 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
CTSA-205ENST00000419493 APBA3O96018 575 aa13.34□□□□□ -0.27
CTSA-205ENST00000419493 LTN1O94822 1766 aa13.34□□□□□ -0.27
CTSA-205ENST00000419493 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
CTSA-205ENST00000419493 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
CTSA-205ENST00000419493 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
CTSA-205ENST00000419493 HOXC9P31274 260 aa13.33□□□□□ -0.28
CTSA-205ENST00000419493 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
CTSA-205ENST00000419493 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
CTSA-205ENST00000419493 ABCC6O95255 1503 aa13.32□□□□□ -0.28
CTSA-205ENST00000419493 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
CTSA-205ENST00000419493 IL2RBP14784 551 aa13.31□□□□□ -0.28
CTSA-205ENST00000419493 PANK3Q9H999 370 aa13.31□□□□□ -0.28
CTSA-205ENST00000419493 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
CTSA-205ENST00000419493 MYOM1P52179 1685 aa13.3□□□□□ -0.28
CTSA-205ENST00000419493 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
CTSA-205ENST00000419493 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
CTSA-205ENST00000419493 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
CTSA-205ENST00000419493 MARCH10Q8NA82 808 aaPredicted RBP13.29□□□□□ -0.28
CTSA-205ENST00000419493 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
CTSA-205ENST00000419493 KIF20BQ96Q89 1820 aa13.28□□□□□ -0.28
CTSA-205ENST00000419493 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
CTSA-205ENST00000419493 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
CTSA-205ENST00000419493 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
CTSA-205ENST00000419493 EMILIN1Q9Y6C2 1016 aa13.27□□□□□ -0.29
CTSA-205ENST00000419493 SMG6Q86US8 1419 aaKnown RBP13.27□□□□□ -0.29
CTSA-205ENST00000419493 LRRC37A3O60309 1634 aa13.27□□□□□ -0.29
CTSA-205ENST00000419493 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
CTSA-205ENST00000419493 DISP2A7MBM2 1401 aa13.26□□□□□ -0.29
CTSA-205ENST00000419493 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
CTSA-205ENST00000419493 EP400Q96L91 3159 aa13.25□□□□□ -0.29
CTSA-205ENST00000419493 FLT4P35916 1363 aa13.25□□□□□ -0.29
CTSA-205ENST00000419493 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
CTSA-205ENST00000419493 NBPF6Q5VWK0 638 aa13.25□□□□□ -0.29
CTSA-205ENST00000419493 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
CTSA-205ENST00000419493 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
CTSA-205ENST00000419493 NBPF4Q96M43 638 aa13.25□□□□□ -0.29
CTSA-205ENST00000419493 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
CTSA-205ENST00000419493 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
CTSA-205ENST00000419493 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
CTSA-205ENST00000419493 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
CTSA-205ENST00000419493 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
CTSA-205ENST00000419493 INSRP06213 1382 aa13.23□□□□□ -0.29
CTSA-205ENST00000419493 TNS1Q9HBL0 1735 aaKnown RBP13.23□□□□□ -0.29
CTSA-205ENST00000419493 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
CTSA-205ENST00000419493 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
CTSA-205ENST00000419493 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
CTSA-205ENST00000419493 KIF24Q5T7B8 1368 aa13.22□□□□□ -0.29
CTSA-205ENST00000419493 KCNQ2O43526 872 aa13.22□□□□□ -0.29
CTSA-205ENST00000419493 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
CTSA-205ENST00000419493 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
CTSA-205ENST00000419493 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
CTSA-205ENST00000419493 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.29
CTSA-205ENST00000419493 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.29
CTSA-205ENST00000419493 KAT6BQ8WYB5 2073 aa13.21□□□□□ -0.29
CTSA-205ENST00000419493 PLSCR1O15162 318 aa13.21□□□□□ -0.29
CTSA-205ENST00000419493 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
CTSA-205ENST00000419493 CNGB1Q14028 1251 aaPredicted RBP13.21□□□□□ -0.29
CTSA-205ENST00000419493 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
CTSA-205ENST00000419493 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
CTSA-205ENST00000419493 WASHC2AQ641Q2 1341 aa13.2□□□□□ -0.3
CTSA-205ENST00000419493 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
CTSA-205ENST00000419493 MAP2P11137 1827 aaKnown RBP13.19□□□□□ -0.3
CTSA-205ENST00000419493 SBF2Q86WG5 1849 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms