RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 CPDO75976 1380 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 NFAT5O94916 1531 aa13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 E9PSI1 815 aa13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 CALD1Q05682 793 aaKnown RBP13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 IL16Q14005 1332 aa13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 KDRP35968 1356 aa13.29□□□□□ -0.28
HMGA1P6-201ENST00000418454 MARF1Q9Y4F3 1742 aaKnown RBP13.28□□□□□ -0.28
HMGA1P6-201ENST00000418454 LMOD3Q0VAK6 560 aa13.28□□□□□ -0.28
HMGA1P6-201ENST00000418454 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
HMGA1P6-201ENST00000418454 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
HMGA1P6-201ENST00000418454 FBLN1P23142 703 aa13.27□□□□□ -0.29
HMGA1P6-201ENST00000418454 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
HMGA1P6-201ENST00000418454 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
HMGA1P6-201ENST00000418454 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.29
HMGA1P6-201ENST00000418454 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
HMGA1P6-201ENST00000418454 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
HMGA1P6-201ENST00000418454 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
HMGA1P6-201ENST00000418454 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
HMGA1P6-201ENST00000418454 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 PRKAR2BP31323 418 aa13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 PEAK1Q9H792 1746 aa13.24□□□□□ -0.29
HMGA1P6-201ENST00000418454 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
HMGA1P6-201ENST00000418454 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
HMGA1P6-201ENST00000418454 EYA1Q99502 592 aa13.23□□□□□ -0.29
HMGA1P6-201ENST00000418454 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
HMGA1P6-201ENST00000418454 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
HMGA1P6-201ENST00000418454 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
HMGA1P6-201ENST00000418454 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
HMGA1P6-201ENST00000418454 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
HMGA1P6-201ENST00000418454 MYH16Q9H6N6 1097 aa13.22□□□□□ -0.29
HMGA1P6-201ENST00000418454 RIPK4P57078 832 aa13.21□□□□□ -0.29
HMGA1P6-201ENST00000418454 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
HMGA1P6-201ENST00000418454 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
HMGA1P6-201ENST00000418454 BABAM1Q9NWV8 329 aa13.2□□□□□ -0.3
HMGA1P6-201ENST00000418454 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
HMGA1P6-201ENST00000418454 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
HMGA1P6-201ENST00000418454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
HMGA1P6-201ENST00000418454 SOX12O15370 315 aa13.18□□□□□ -0.3
HMGA1P6-201ENST00000418454 HMOX1P09601 288 aa13.18□□□□□ -0.3
HMGA1P6-201ENST00000418454 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
HMGA1P6-201ENST00000418454 PHACTR3Q96KR7 559 aa13.18□□□□□ -0.3
HMGA1P6-201ENST00000418454 LTN1O94822 1766 aa13.17□□□□□ -0.3
HMGA1P6-201ENST00000418454 ERBB3P21860 1342 aa13.17□□□□□ -0.3
HMGA1P6-201ENST00000418454 NEFLP07196 543 aa13.17□□□□□ -0.3
HMGA1P6-201ENST00000418454 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
HMGA1P6-201ENST00000418454 ANKRD24Q8TF21 1146 aa13.17□□□□□ -0.3
HMGA1P6-201ENST00000418454 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
HMGA1P6-201ENST00000418454 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 GNAI1P63096 354 aa13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
HMGA1P6-201ENST00000418454 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 NBPF6Q5VWK0 638 aa13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 NBPF4Q96M43 638 aa13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
HMGA1P6-201ENST00000418454 COL18A1P39060 1754 aa13.15□□□□□ -0.31
HMGA1P6-201ENST00000418454 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
HMGA1P6-201ENST00000418454 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
HMGA1P6-201ENST00000418454 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
HMGA1P6-201ENST00000418454 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
HMGA1P6-201ENST00000418454 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
HMGA1P6-201ENST00000418454 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
HMGA1P6-201ENST00000418454 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
HMGA1P6-201ENST00000418454 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
HMGA1P6-201ENST00000418454 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
HMGA1P6-201ENST00000418454 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
HMGA1P6-201ENST00000418454 WDR17Q8IZU2 1322 aa13.12□□□□□ -0.31
HMGA1P6-201ENST00000418454 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
HMGA1P6-201ENST00000418454 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
HMGA1P6-201ENST00000418454 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
HMGA1P6-201ENST00000418454 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
HMGA1P6-201ENST00000418454 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
HMGA1P6-201ENST00000418454 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
HMGA1P6-201ENST00000418454 CHL1O00533 1208 aa13.1□□□□□ -0.31
HMGA1P6-201ENST00000418454 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
HMGA1P6-201ENST00000418454 LTV1Q96GA3 475 aaPredicted RBP13.1□□□□□ -0.31
HMGA1P6-201ENST00000418454 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
HMGA1P6-201ENST00000418454 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
HMGA1P6-201ENST00000418454 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
HMGA1P6-201ENST00000418454 FAM83GA6ND36 823 aa13.08□□□□□ -0.32
HMGA1P6-201ENST00000418454 HSP90AB1P08238 724 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms